Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq9639 325 2e-84 seq10734 286 2e-72 seq9470 241 8e-59 seq6415 190 1e-43 seq9538 178 8e-40 seq7053 120 2e-22 seq646 96.9 2e-15 >seq9639 Length=103419 Score = 325 bits (360), Expect = 2e-84 Identities = 533/756 (71%), Gaps = 33/756 (4%) Strand=Plus/Minus Query 836 GATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACC 895 || || |||||||| ||||||| ||| ||||||| |||| |||| | |||||| || Sbjct 4294 GACCGTACCGGCACGGGCACGCGCAGCGTGTTCGGCCACCAGATGCGCTTCGACCTGTCC 4235 Query 896 GAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTAC--GAAC 953 || ||||| |||||||||||||| ||| || ||| |||| || | | | | |||| Sbjct 4234 GAAGGCTTTCCGCTGGTCACCACCAAGAAGGTGCACCTCAAGTCCAT--CATCCTGGAAC 4177 Query 954 TTCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACCA 1013 | ||||||||||| | ||||||| || ||| ||| | || |||| ||||| Sbjct 4176 TGCTGTGGTTCCTGCGCGGCGACAGCAATGTGCGCTGGCTGCAGGAGCGCGGCTGCACCA 4117 Query 1014 TCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGC 1073 |||||||||| |||||| || | ||| |||| || || ||||| |||| ||| |||| Sbjct 4116 TCTGGGACGAATGGGCCCGCGAGGACGGCGACCTGGGCCCGGTCTATGGCGTGCAATGGC 4057 Query 1074 GGCACTGGCATGTCGAGGACGGAGGATCGTCGTGGATTGACCAGATCTCGGCCGCCGTGG 1133 | |||||| ||| | |||| | | | || ||||||||| |||| |||| Sbjct 4056 GCAACTGGC----CGACGCCGGACGGCGGCCAC--ATCGACCAGATC---GCCGAAGTGG 4006 Query 1134 ---AGCTGCTTCGCGAGGA-CCCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGTC 1189 ||| ||| | ||| | ||| ||| ||||| | | | || ||| |||||||| Sbjct 4005 TCAAGCAGCT-CAAGAGCAACCCGGACAGCCGCCGCATCATCGTCAGCGCCTGGAACGTG 3947 Query 1190 GGTGACCT-CAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGT 1248 | ||||| | || | ||||| || || |||||| | | |||||| | ||||| | Sbjct 3946 GCCGACCTGCCGC-AGATGGCGCTCATGCCCTGCCACGCCTTCTTCCAGTTCTACGTGGC 3888 Query 1249 CGACGGCCGGCTCTCGCTGC-AGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGC 1307 ||||||| |||| ||||| || | |||||||||||||||||||| ||||| || || | Sbjct 3887 CGACGGCAAGCTCA-GCTGCCAGCTGTACCAGCGCAGCGCGGACATCTTCCTGGGCGTTC 3829 Query 1308 CGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGCCTGC 1367 | ||||| |||||| |||||||| || | |||||| | || ||||| || |||| Sbjct 3828 CCTTCAACATCGCCAGCTACGCGCTGCTGACCCACATGCTGGCCCAGCAATGCGACCTGG 3769 Query 1368 GGGTGGGTGAGCTGATCTGGACCGGCGGCGACTGCCACATCTACAACAACCACGTCGACC 1427 |||||| || | ||||||||||||||||||||||||||||||||||||||| || || Sbjct 3768 AGGTGGGCGACTTCATCTGGACCGGCGGCGACTGCCACATCTACAACAACCACTTCACCC 3709 Query 1428 AGGCGCTGATGCAGCTCCGCCGACGACCGCGGCCCTACCCGAGGCTCGTGCTACACCACG 1487 ||| || ||||| || | || ||||||||| ||| | | || | Sbjct 3708 AGGTCGAGACCCAGCTGGCGCGCCAGCCCTTCGCCTACCCGACGCT----TCAGATCAAG 3653 Query 1488 CGCCG-------TCGATCTTCGACTACCGGTACGAGCACATCCACCTCGTGAACTACGAC 1540 ||||| || ||||||| |||| ||||||| || || | |||| |||| | Sbjct 3652 CGCCGGCCCGACTCCATCTTCGGCTACGAGTACGAGGACTTCGAGGTCGTCGGCTACCAG 3593 Query 1541 CCGCACCCGTCGATCAAGGCGCCGGTGGCCGTCTGA 1576 | ||| | | |||||||| || |||||||||||| Sbjct 3592 CACCACGAGCCCATCAAGGCCCCCGTGGCCGTCTGA 3557 >seq10734 Length=9239 Score = 286 bits (316), Expect = 2e-72 Identities = 534/758 (70%), Gaps = 31/758 (4%) Strand=Plus/Plus Query 835 TGATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCAC 894 ||||||||||||||||||||| | ||| ||| ||| ||| |||| | | |||| | Sbjct 1275 TGATCGCACCGGCACCGGCACCCGCAGCGTGTTTGGCTGGCAGATGCGTTTCAACCTGGC 1334 Query 895 CGAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTACGAACT 954 ||| |||||||||||||||||||| ||| | ||| | ||| | |||| || Sbjct 1335 CGAAGGCTTCCCGCTGGTCACCACCAAGAAGCTGCACCTGCGCTCGATCATCCACGAGCT 1394 Query 955 TCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCG--CTCAACGACAACGGCGTCACC 1012 ||||||||||| | |||||||| ||| | ||| || || |||||| || Sbjct 1395 GCTGTGGTTCCTGAAGGGCGACACCAACATC--GGCTACCTGAAGGACAACCAGGTACGG 1452 Query 1013 ATCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGG 1072 |||||||||||||||||||||| | || ||||||| || ||||||||| ||||||| Sbjct 1453 ATCTGGGACGAGTGGGCCGACGACAATGGCGACCTCGGCCCGGTCTACGGCAAGCAGTGG 1512 Query 1073 CGGCACTGGCATGTCGAGGACGGAGGATCGTCGTG-GATTGACCAGATCTCGGCCGCCG- 1130 || |||| | | | | | ||| | ||| ||| |||||||| | | || | Sbjct 1513 CGCAGCTGG---GCCACCGCCTGCCGATGGCGGTGAGATCGACCAGATG-CAGTGGCTGG 1568 Query 1131 TGGAGCTGCTTC-GCGAGGACCCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGTC 1189 |||| | | ||| |||| || ||||| ||| ||||| ||| |||||||| Sbjct 1569 TGGACGAGATCAAGCGCA-ACCCGGATTCGCGTCGGCTGGTGGTCAGCGCCTGGAACGTG 1627 Query 1190 GGTGACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTC 1249 || || ||| | ||||| || |||||||||| | |||||||| | ||||| || Sbjct 1628 GGCGAGCTCTCTCAGATGGCGCTGATGCCGTGCCACAACCTGTTCCAGTTCTACGTGGTG 1687 Query 1250 GACGGCCGGCTCTCGCTGC-AGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCC 1308 |||||| |||| ||||| || | ||||||||||||| ||||| |||||||| ||||| Sbjct 1688 GACGGCAAGCTCA-GCTGCCAGCTGTACCAGCGCAGCGGCGACATCTTCCTCGGAGTGCC 1746 Query 1309 GTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGCCTGCG 1368 |||||| |||||| |||||||| || | |||||| | |||||| |||||||| | Sbjct 1747 GTTCAACATCGCCAGCTACGCGCTGCTGACCCACATGGTGGCGCAGGCCACCGGCCTGGG 1806 Query 1369 GGTGGGTGAGCTGATC-TGGACCGGC--GGCGACTGC-CACATCTACAACAACCACGTCG 1424 ||||| || || || || || || ||||| ||| ||| | || |||||| ||| Sbjct 1807 CGTGGGCGA-CT--TCGTGCACACGCTGGGCGA-TGCGCACCTGTATTCGAACCACTTCG 1862 Query 1425 ACCAGGCGCTGATGCAGCTCCGCCGACGACCGCG-GCCCTACCCGAGGCTCGTGCTACAC 1483 | ||||||| |||||| || |||||| || || |||| ||| ||| | | Sbjct 1863 AGCAGGCGCGCGAGCAGCTGTCGCGTGAACCGCGCGCGCT-GCCGACGCT-GTGGTTGAA 1920 Query 1484 CACGCGCCGT---CGA--TCTTCGACTACCGGTACGAGCACATCCACCTCGTGAACTACG 1538 | || | || ||| | |||| || || || ||| |||||| | ||| ||||| Sbjct 1921 CCCG-GAGGTGACCGACCTGTTCGGCTTCCAGTTCGACGACATCCGCATCGACGGCTACG 1979 Query 1539 ACCCGCACCCGTCGATCAAGGCGCCGGTGGCCGTCTGA 1576 ||||||||||| | ||||||||||||||||| || ||| Sbjct 1980 ACCCGCACCCGGCCATCAAGGCGCCGGTGGCGGTGTGA 2017 >seq9470 Length=127963 Score = 241 bits (266), Expect = 8e-59 Identities = 442/637 (69%), Gaps = 12/637 (2%) Strand=Plus/Minus Query 836 GATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACC 895 || ||||||||||||||||| ||| || |||||| |||| |||| | |||||| | Sbjct 53204 GACCGCACCGGCACCGGCACCCTGGGCGTCTTCGGCCGCCAGATGCGCTTCGACCTGGCG 53145 Query 896 GAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTG-CGTACGAACT 954 |||||| |||||| | ||||| ||| | ||| | ||| | ||| ||| || Sbjct 53144 CGGGGCTTTCCGCTGCTGACCACCAAGAAGCTGCACCTGCGCTCGATCATCGT-CGAGCT 53086 Query 955 TCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACCAT 1014 |||||||||||| | ||||| || ||| | ||| || |||||||| |||| ||| Sbjct 53085 TCTGTGGTTCCTGCGCGGCGAGACCAACATCGCCTGGCTGAAGGACAACGGGGTCAGCAT 53026 Query 1015 CTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGCG 1074 ||||||||| ||||||||||||| || | |||||||| ||||||||| ||||||||| Sbjct 53025 CTGGGACGAATGGGCCGACGCCGAGGGCGAGCTCGGTCCGGTCTACGGCAAGCAGTGGCG 52966 Query 1075 GCACTGGCATGTCGAGGACGGAGGATCGTCGTGGATTGACCAGATCTCGGCCGCCGTGGA 1134 ||| || | | || | || |||| || ||||||||| | | || || Sbjct 52965 CTCGTGGG----CGGCGCCCGACGGCCG-CGTG-ATCGACCAGATCGCCAATGTGGTCGA 52912 Query 1135 GCTGCTTCGCGAGGACCCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGTCGGTGA 1194 | | | |||| |||| || ||||| || | || || || |||||| | || Sbjct 52911 GGCGATCCGCGCCAACCCCAACAGCCGCCGCCACATCGTCTCGGCCTGGAACCCGGCCGA 52852 Query 1195 CCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGACGG 1254 | || ||||||||| || | ||||||||| | |||||||| | | ||| | ||||| Sbjct 52851 CGTCGACGACATGGCCCTGCCGCCGTGCCACTGCCTGTTCCAGTTCTTCGTGGCGGACGG 52792 Query 1255 CCGGCTCTCGCTGCAGG-TCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCA 1313 || || |||| | | ||||||||| || ||| |||||||||| |||||||||| Sbjct 52791 AAAACTGTC-CTGCCTGCTTTACCAGCGCTCGGCCGACCTGTTCCTCGGCGTGCCGTTCA 52733 Query 1314 ATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGCCTGCGGGTGG 1373 | |||||||| ||||| || || | | ||| || ||| ||||||||| | | Sbjct 52732 ACATCGCCTCCTACGCCCTGCTGACCCTGATGACGGCCCAGGCCACCGGCCTGCAGCCCG 52673 Query 1374 GTGAGCTGATCTGGACCGGCGGCGACTGCCACATCTACAACAACCACGTCGACCAGGCGC 1433 | ||| | | ||| |||||| |||| |||| ||||| ||||| |||||| Sbjct 52672 GCGAGTTCGTGCACACCCTGGGCGACGCCCACCTCTATCTGAACCATGTCGAGCAGGCGA 52613 Query 1434 TGATGCAGCTCCGCCGACGA-CCGCGGCCCTACCCGA 1469 | |||||||| ||| ||| || | ||||| ||||| Sbjct 52612 AGCTGCAGCTCTCCCG-CGAGCCCCTGCCCTTCCCGA 52577 >seq6415 Length=247467 Score = 190 bits (210), Expect = 1e-43 Identities = 411/604 (68%), Gaps = 22/604 (4%) Strand=Plus/Plus Query 836 GATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACC 895 || ||||| ||||||||||||||| || ||||||| ||| | || | ||| || || Sbjct 52969 GACCGCACGGGCACCGGCACGCTGGGCGTGTTCGGCCGGCAGATCCGCTTCGATCTGGCC 53028 Query 896 GAGGGCTTCCCG---CTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTACGAA 952 ||||||||||| ||| | ||| ||||| | ||| | ||| | ||| Sbjct 53029 AAGGGCTTCCCGGTTCTGACCTCCAAGAAGC---TGCACCTGCGCTCGATCATCATCGAG 53085 Query 953 CTTCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACC 1012 || ||||||||||| | |||||||| ||| | ||||| ||||||||||| | Sbjct 53086 CTGCTGTGGTTCCTGAAGGGCGACACCAACATCGCCTACCTCAAGGACAACGGCGTGCGC 53145 Query 1013 ATCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGG 1072 |||||||||||||||||||||| ||| | || || || ||||||||| ||||||| Sbjct 53146 ATCTGGGACGAGTGGGCCGACGAAAACGGCGATCTTGGCCCGGTCTACGGCAAGCAGTGG 53205 Query 1073 CGGCACTGGCATGTCGAGGACGGAGGATCGTCGTGGATTGACCAGATCTCGGCCGCCGTG 1132 || || | | ||| | |||| | || ||| ||| ||||||||| ||| | || Sbjct 53206 CG---CTCG-TGGGCGACGCCGGACGGGCG-CGT-GATCGACCAGATC---GCCAACCTG 53256 Query 1133 GAGCTGCTTCGCGAGGAC----CCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGT 1188 | | | | ||| || | ||||| || | || | || |||||| Sbjct 53257 G-TCGAAAACCTAAAGACCAATCCAAGCAGCCGCCGCCACATCGTCACGGCCTGGAACCC 53315 Query 1189 CGGTGACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGT 1248 || || || ||||||||| || | || |||||| | |||||||| | | ||||| Sbjct 53316 CGCCGATGTCGACGACATGGCCCTGCCGCCCTGCCACTGCCTGTTCCAGTTCTTCGTCGC 53375 Query 1249 CGACGGCCGGCTCTCGCTG-CAGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGC 1307 ||||| ||| |||| ||| |||| || |||||||| ||| ||||| | || |||| Sbjct 53376 GGACGGAAAGCT-GAGCTGCCAGCTCTATCAACGCAGCGCCGACGTGTTCTTAGGGGTGC 53434 Query 1308 CGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGCCTGC 1367 ||||||| |||||||| ||||| || || | | ||| |||| || | ||||||| Sbjct 53435 CGTTCAACATCGCCTCCTACGCCCTGCTGACCCTGATGGTCGCCAAGGTCGTCGGCCTGG 53494 Query 1368 GGGTGGGTGAGCTGATCTGGACCGGCGGCGACTGCCACATCTACAACAACCACGTCGACC 1427 | ||| ||| | || ||| ||||||| |||| |||| |||||| |||||| Sbjct 53495 AGCCGGGCGAGTTCGTCCACACCTTCGGCGACGCCCACCTCTATCTGAACCACCTCGACC 53554 Query 1428 AGGC 1431 |||| Sbjct 53555 AGGC 53558 >seq9538 Length=646221 Score = 178 bits (196), Expect = 8e-40 Identities = 357/526 (68%), Gaps = 20/526 (4%) Strand=Plus/Plus Query 836 GATCGCACCGGCACCGG--CACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCA 893 || |||||||||||||| |||||| | ||||||| ||| |||| | ||| || Sbjct 486501 GACCGCACCGGCACCGGCACACGCTCGG--TGTTCGGCTATCAGATGCGTTTCGATCTGG 486558 Query 894 CCGAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTACGAAC 953 |||| ||||||||| || | ||||| ||| | ||| | || ||| | |||||| Sbjct 486559 CCGACGGCTTCCCGGTGCTTACCACCAAGAAACTGCACCTGAAGTCGATCATCCACGAAC 486618 Query 954 TTCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACCA 1013 |||||||||| || ||||| || ||| | || || |||||| |||||||||||| Sbjct 486619 TTCTGTGGTTTCTGGCCGGCGATACCAACATCAAATATCTGAACGACCACGGCGTCACCA 486678 Query 1014 TCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGC 1073 |||||||||||||||| || ||| || | ||||| || ||||| ||| |||||||| Sbjct 486679 TCTGGGACGAGTGGGCGGATGCCAAGGGCGATCTCGGCCCGGTCTATGGCAAGCAGTGGC 486738 Query 1074 GGCACTGGCATGTCGAGGACGGAGGATCGTCGTGGATTGACCAGATC-----TCGGCCGC 1128 | ||||| | | | | || || | || ||||||||| || | | | Sbjct 486739 GCTCCTGGCCGGATGCGCATGGCGGCAC------CATCGACCAGATCGAAAATCTG-CTC 486791 Query 1129 CGTGGAGCTGCTTCGCGAGGACCCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGT 1188 || | | | ||| | ||| | || |||||| | || || |||||||| Sbjct 486792 CGCGAA----ATCCGCTGCAATCCTTATTCACGCCGGCTGATCGTCTCGGCATGGAATCC 486847 Query 1189 CGGTGACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGT 1248 | || | | ||||| || | || |||||| | |||||||| | ||||| Sbjct 486848 GGCCGAGGTGGAGGCAATGGCGCTGCCGCCCTGCCACTGCCTGTTCCAGTTCTACGTTTC 486907 Query 1249 CGACGGCCGGCTCTCGCTGCAGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCC 1308 ||||| ||||| || ||| |||||||||| ||||||||| || ||||| ||||| Sbjct 486908 GGACGGACGGCTGTCATGCCAGCTCTACCAGCGTTCCGCGGACATCTTTCTCGGCGTGCC 486967 Query 1309 GTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAG 1354 |||||| ||||| || || ||||| ||| | ||| | |||||| Sbjct 486968 GTTCAACATCGCTTCCTATGCGCTGCTCACCATGATGGTGGCGCAG 487013 >seq7053 Length=464797 Score = 120 bits (132), Expect = 2e-22 Identities = 372/559 (67%), Gaps = 40/559 (7%) Strand=Plus/Minus Query 836 GATCGCACCGGCACCGGCACGCTGAGCAAG---TTCGGCGCCCAGCTGCGGTACGACCTC 892 || ||||||||||| || |||| || | ||||| |||| |||| | |||||| Sbjct 70840 GACCGCACCGGCACGGGTACGC---GCTCGGTCTTCGGTTACCAGATGCGCTTCGACCTT 70784 Query 893 ACCGAGGGCTTCCCGCTGGTCACCAC---GAAGC-GCGTC--CACTTCAAATCGGTTGCG 946 |||| || || ||| | ||||||| ||||| || || | || || || | | Sbjct 70783 TCCGAAGGTTTTCCGGTTCTCACCACCAAGAAGCTGCATCTGCGCTCCA--TCA--TCCA 70728 Query 947 TACGAACTTCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGC 1006 | ||| | ||||||||||| | ||||| || || | ||||| || |||||| Sbjct 70727 T--GAATTGCTGTGGTTCCTGAAGGGCGATACCAATATCGCCTATCTCAAGGAAAACGGC 70670 Query 1007 GTCACCATCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCG 1066 || ||||||||||||| |||||||||| ||| | ||||| || ||||| || ||| Sbjct 70669 GTTTCCATCTGGGACGAATGGGCCGACGAGAACGGCGATCTCGGCCCGGTCTATGGTGCG 70610 Query 1067 CAGTGGCGGCACTGGCATGTCGAGGACGGAGGATCGTCGTGGATTGACCAGATCTCGGCC 1126 |||||||| ||||| || | |||| | || | | || ||||||||| | || Sbjct 70609 CAGTGGCGTTCCTGGC----CGGCGCCGGACGGCCGCCAT--ATCGACCAGATCGC-GCT 70557 Query 1127 GCCG-TGGAGCTGCTTCGCGAGG----ACCCTGACTCGCGCCGGAACGTGGTATCCGCAT 1181 | | | ||| || || | |||| | || || || || | || || || | Sbjct 70556 TCTGATCGAGGGTCT----GAAGACCAACCCGAATTCCCGTCGTCACATCGTTTCGGCGT 70501 Query 1182 GGAA--CGTCGGTGACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCT 1239 |||| || || || | ||| ||||| | | || || ||| | |||||||| | Sbjct 70500 GGAACCCGGCGCTG--GTGGACGAAATGGCGTTGCCGCCCTGTCACTGCCTGTTCCAGTT 70443 Query 1240 GTACGTCGTCGACGGCCGGCTCTCGCTG-CAGGTCTACCAGCGCAGCGCGGACATGTTCC 1298 || || ||| || ||| || ||| ||| |||| |||||| || || || |||| Sbjct 70442 CTATGTTTCCGATGGAAAGCTGTC-CTGCCAGCTCTATCAGCGCTCTGCCGATATCTTCC 70384 Query 1299 TCGGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGG 1358 |||| ||||||||||| |||||||| || ||||| || | | ||| | |||||| Sbjct 70383 TCGGCGTGCCGTTCAACATCGCCTCCTATGCGCTGCTGACACTGATGGTGGCGCAGGTCA 70324 Query 1359 CCGGCCTGCGGGTGGGTGA 1377 | |||||| | |||||| Sbjct 70323 CGGGCCTGAAGCCGGGTGA 70305 >seq646 Length=687 Score = 96.9 bits (106), Expect = 2e-15 Identities = 167/240 (70%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 1205 ATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGACGGCCGGCTCTCG 1264 ||||| || | || || ||| | |||| ||| | ||||||| | | |||||||| || Sbjct 408 ATGGCGCTGCCGCCCTGTCACTGCCTGTTTCAGTTCTACGTCGCCAAGGGCCGGCTGTC- 350 Query 1265 CTGC-AGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCAATATCGCCTC 1323 |||| || ||||||||||| ||||| |||||||||| ||||| ||||| ||||| || Sbjct 349 CTGCCAGCTCTACCAGCGCTCGGCGGATGTGTTCCTCGGCGTGCCCTTCAACATCGCGTC 290 Query 1324 GTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGCCTGCGGGTGGGTGAGCTGAT 1383 || || || || | ||| |||||||| | |||||| | || ||| | | Sbjct 289 CTATGCCCTGCTGACCATGATGGTCGCGCAGGTCACTGGCCTGAAGCCCGGCGAGTTCGT 230 Query 1384 CTGGACCGGCGGCGACTGCCACATCTACAACAACCACGTCGACCAGGCGCTGATGCAGCT 1443 ||| ||| ||| ||| |||| ||| || |||| ||||||| | ||||||| Sbjct 229 GCATACCCTCGGTGACGCGCACCTCTATTCCAATCATCTCGAGCAGGCGCGGCTGCAGCT 170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296076850578159