Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_031097.1 Length=52077 Score E Sequences producing significant alignments: (Bits) Value seq11405 125 2e-24 >seq11405 Length=110570 Score = 125 bits (138), Expect = 2e-24 Identities = 107/132 (81%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 45891 CTCGATTGGGTGATCGTCGGCGGCGAGTCTGGCCACGGCGCACGGCCGATGCATCCCGAC 45950 || || ||||||||||||||||||||| |||| ||| || || || |||||||||||| Sbjct 75394 CTGGACTGGGTGATCGTCGGCGGCGAGAGCGGCCCCGGTGCGCGTCCCATGCATCCCGAC 75335 Query 45951 TGGGCGCGATCCCTGCGTGACCAGTGCGTCGCGGCTGGGGTGCCGTTCATGTTCAAGCAG 46010 ||||||| |||||| |||||||||| || | || | | ||||||||||||||| Sbjct 75334 TGGGCGCTCAGCCTGCGCGACCAGTGCGAGGCCGTGGGCACGGCCTTCATGTTCAAGCAG 75275 Query 46011 TGGGGCGAGTGG 46022 |||||||||||| Sbjct 75274 TGGGGCGAGTGG 75263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166495021098562