Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_031098.1
Length=40749
Score E
Sequences producing significant alignments: (Bits) Value
seq14976 1276 0.0
seq8686 235 1e-57
seq449 235 1e-57
seq1918 228 2e-55
seq8226 210 6e-50
seq8225 206 7e-49
seq10131 185 2e-42
seq9034 163 7e-36
seq7305 145 2e-30
seq6169 131 4e-26
seq8065 127 5e-25
seq376 127 5e-25
seq12839 113 1e-20
>seq14976
Length=24186
Score = 1276 bits (1414), Expect = 0.0
Identities = 1327/1731 (77%), Gaps = 12/1731 (1%)
Strand=Plus/Minus
Query 1 ATGGCAAAACTCACTGAACCTATGAAAATCTTTATAGTTCAAAGTCTTGCTTGTTTTGAA 60
||||||| ||| | || ||| ||||||||||||||||||| ||||||||| ||||||
Sbjct 19240 ATGGCAACACTTAAAGAGCCTGTGAAAATCTTTATAGTTCAGTCTCTTGCTTGCTTTGAA 19181
Query 61 ACACCTCAACAAGTCGCTGACTCTGTAA-AGAATACTTTCAAGGT--TGAGATCGAAAGA 117
|| ||||||||||| | || |||||| |||| | ||| ||| ||| || ||| |
Sbjct 19180 ACCCCTCAACAAGTTGTAGATGCTGTAAGAGAAGAATTT---GGTATTGAAATTGAACGG 19124
Query 118 ATGCAATGTGCAAATTACGATCCAACCAAACCAACTGGCGAAAAAATGAGTCAGAAACTA 177
|||| ||| || |||||||| ||| |||| || | ||||||| |||| ||
Sbjct 19123 CAGCAAGTTGCCTCATATGATCCAACAAAAGCAACATGCAGAGGAATGAGTAAGAAGCTT 19064
Query 178 AAGG-ACTTGTTTTACAGAACACGAGAAGATTTTAAATCCAATATCTATGACATCCCATT 236
||| |||| || ||| | |||| ||| |||| || ||||| |||||||| |||||
Sbjct 19063 AAGACACTTTTTGAACATA-CACGCGAACATTTCAAGAAAAATATATATGACATTCCATT 19005
Query 237 AGCTAATAAGGCTGTCCGCCTCAATGAGCTTCAGAAAATGTATGAAGATTGGGGTAAGAA 296
||| ||||| || || ||||| ||||| || || || ||||||| |||||| || ||
Sbjct 19004 AGCCAATAAAGCGGTACGCCTTAATGAACTCCAAAAGATGTATGTCGATTGGAAGAATAA 18945
Query 297 TAAAATCATGAAGCAAGGAATCATCAAACAGATTAAAGATGAAATGCATGGACATGATTT 356
|||| | | || || | ||||| |||||| |||| |||||||||||||| |||| |
Sbjct 18944 TAAAGTAAAAAAACAGAGCATCATTAAACAGGTTAAGGATGAAATGCATGGTTATGAAAT 18885
Query 357 ACAGCTATTAGATCTTGAATTGAAGAAATTAGAAATTCAGCGATTGAGAGATGGCGAGGA 416
|| |||||||| | | || | | ||||| | || | | | | || || |
Sbjct 18884 TCAATTATTAGATGAGCAGCTTAAACAGCTTGAAATAGACAGAATTAAAAACGGAGATGG 18825
Query 417 TGGTGCTGGTGATGATCCAACACCTGTAAATGTCACTATTCATGTTGTAGATGCGAGTAA 476
|| | | ||||||||| ||||| ||||| || |||||||| ||||| |||||||||||
Sbjct 18824 TGAAGGCGCTGATGATCCTACACCAGTAAAAGTAACTATTCAGGTTGTTGATGCGAGTAA 18765
Query 477 AAAAGATGCCGAACATCAATCCAACACTGAATGTGCCTCAGGCTAACTTCCTACAATTAC 536
| || ||||||||||| ||||| || |||||||| ||||||||||| || ||| | |
Sbjct 18764 AGAAAATGCCGAACATAAATCCGACGCTGAATGTACCTCAGGCTAATTTTCTAAAGCTCA 18705
Query 537 CAAATAAATTTAGAGCGTTCGTTGCTGGGTTTGGTTCAGGTAAAACATGGGTTGGTTGTT 596
|||||| ||| | || || || || || ||||| || |||||||| ||||| || ||||
Sbjct 18704 AAAATAAGTTTCGTGCATTTGTCGCAGGATTTGGATCTGGTAAAACTTGGGTGGGCTGTT 18645
Query 597 CAAGTCTTTGTGATAAGTCTTGGTCTTTCCCTAAAGTTCCGTTGGGTTACTTTGCTCCAA 656
| ||||||||||||||||||||| || || ||||| || ||||| |||||||| ||||
Sbjct 18644 CGAGTCTTTGTGATAAGTCTTGGGAATTTCCGAAAGTACCTTTGGGCTACTTTGCACCAA 18585
Query 657 CGTATCCGCAGATCCGAGATATCTTTTTCCCTACGATTGATGAAGTAGCTTTCGATTGGG 716
| ||||| ||||| |||||||| || || ||||| || |||||||| ||||| || ||||
Sbjct 18584 CCTATCCTCAGATACGAGATATTTTCTTTCCTACCATAGATGAAGTTGCTTTTGACTGGG 18525
Query 717 GATTGAAGACAAAGATCTATGAATCTAACAAAGAAGTTGATCTTTACTATGGCCGCCAAT 776
| | ||||| ||||| ||||| || || || ||||||||| |||||||||| |||||||
Sbjct 18524 GCCTTAAGACTAAGATTTATGAGTCAAATAAGGAAGTTGATATTTACTATGGTCGCCAAT 18465
Query 777 ATCGAAGCACAATTATTTGCCGATCAATGGAAAAGCCCAATACTATTGTAGGTTTTAAGA 836
| |||| ||| |||||||||| |||||||||||||| | || ||||| |||||||| |
Sbjct 18464 ACAGAAGTACAGTTATTTGCCGTTCAATGGAAAAGCCTCAAACAATTGTTGGTTTTAAAA 18405
Query 837 TTGGTCATGCGCTGATTGATGAGCTTGATGTGATGACAAAGGTCAAGGCTCAACAAGCTT 896
||||||||| ||| |||||||| |||||||| ||| | | | | ||||| |||||||| |
Sbjct 18404 TTGGTCATGGGCTAATTGATGAACTTGATGTCATGCCTACGCTTAAGGCACAACAAGCAT 18345
Query 897 GGCGTAAGATCATTGCTCGTATGCGATATAAACAAGCTGGTTTGTTGAACGGTATTGATG 956
|||| || ||||||||||||||||| ||||| ||||| ||||| | || ||||||||||
Sbjct 18344 GGCGAAAAATCATTGCTCGTATGCGTTATAAGCAAGCGGGTTTAATCAATGGTATTGATG 18285
Query 957 TTGCAACAACGCCAGAGGGCTTTAAGTTCACTCATGAGCAATTTGTCAAAGAAGCAAAC- 1015
| || || || || ||||| ||||| || || ||||| || ||||| ||||| || |||
Sbjct 18284 TGGCCACCACACCTGAGGGATTTAAATTTACACATGAACAGTTTGTAAAAGAGGCTAACT 18225
Query 1016 CAA-AGCGAGGCTAAGCGCGCTCTATATGGAATGATTCAAGCTTCCACCTATGATAATGA 1074
||| | | | || || || || || ||||||||||| ||||| ||||| ||||||||
Sbjct 18224 CAACACCTCAG--AAACGAGCACTTTACGGAATGATTCAGGCTTCAACCTACGATAATGA 18167
Query 1075 AGCCAATCTTCCTGATGACTACATTGCATCATTGTTTGAGTCTTACCCACCTCAATTGAT 1134
||| ||| | |||||||| || ||| | || || || ||||| || |||||||| | ||
Sbjct 18166 AGCAAATTTACCTGATGATTATATTTCTTCGTTATTCGAGTCCTATCCACCTCAGCTCAT 18107
Query 1135 TTCAGCCTACTTAAAAGGGCAATTCGTAAATTTAACGAGTGGGGCTGTATATCCAGACTT 1194
||| || || ||||||||||| |||||||| ||||| ||||| ||||||||||| || ||
Sbjct 18106 TTCTGCATATTTAAAAGGGCAGTTCGTAAACTTAACTAGTGGCGCTGTATATCCTGATTT 18047
Query 1195 CGACCGGACCTTAAACCATACAGATGAGGAAATAAGACCTAATGAGGCTTTACTCATTGG 1254
|| || | ||||| ||||| |||| || || |||||||||||| |||||||||||||
Sbjct 18046 TGATCGAAAATTAAATCATACCAATGAAGAGATTAGACCTAATGAGTCTTTACTCATTGG 17987
Query 1255 TATGGACTTCAACGTCTTGAAGATGGCAGCTGTTGTTTATGTGATTCGAGATGGCAAGCC 1314
||||||||| ||||| ||||| ||||| || || ||||||| || || ||||| |||||
Sbjct 17986 TATGGACTTTAACGTTTTGAAAATGGCTGCAGTAATTTATGTCATACGTGATGGTAAGCC 17927
Query 1315 AAGAGCTTTAGATGAGTTGGTCGGTGTGCGTGATACGCCAACAATGGCCGATCTATTAAT 1374
||| || || ||| |||| || ||| | ||||| ||||||||||| || | ||
Sbjct 17926 CCTAGCATTGGACGAGATGGTTGGAGTGAGAGATACACCAACAATGGCAACATTACTTAT 17867
Query 1375 TGAAAAGTTCCCAAACCATGAGATGACAGTTATCCCTGATGCGGCAGGCCAAGCTACTTC 1434
||| || ||| ||||| |||||||| || |||||||| ||||| ||| |||| ||
Sbjct 17866 TGAGCGCTTTCCATTTCATGAAATGACAGTAATTCCTGATGCAGCAGGGCAATCTACATC 17807
Query 1435 ATCAAAAAAGAGTAGCGAATCTGATCATGCAATCTTGAGACAGAAGGGCTTAAGGGTCGA 1494
||| ||||| || || || || ||||| ||| || || | ||||| || ||| | ||
Sbjct 17806 ATCTAAAAATAGCAGTGAGTCAGATCACCAAATTTTACGAGATAAGGGTTTTAGGATTGA 17747
Query 1495 AGTCAATTCAACAAACCCGAACATTAAAGACCGAATTAATGCAGTAAATGCTTTGATCTT 1554
||| || || |||||| |||||||| || ||||| |||||||||||| |||| |
Sbjct 17746 AGTGGATGGAATAAACCCTGCAATTAAAGATCGGATTAACGCAGTAAATGCTCTGATTCT 17687
Query 1555 AAATGGCAATGGTGAGCGAACACTCTTAGTCAATACAAATAAATGCCCAAGACTCACAGA 1614
|||| | |||||||||||||| ||| ||||| || |||||||| | | |||||
Sbjct 17686 TAATGCAGAGGGTGAGCGAACACTTAAAGTAAATACCAACAAATGCCCCCGTTTTACAGA 17627
Query 1615 GACCTTTGAGCAGCAAGTTTATGACGATTTTGGAATGCCAGATAAGAAATCAGGCTTGGA 1674
|| | || |||||| ||||||| |||||||||||||| ||||| |||||||| || ||
Sbjct 17626 AACGCTAGAACAGCAAATTTATGATGATTTTGGAATGCCGGATAAAAAATCAGGTTTAGA 17567
Query 1675 CCATGTCGGAGATGCTGGCGGATATCCTCTCGCCAAACGTTTCCCAATTAT 1725
||||| ||||||||||| || ||||| | || || || ||||| |||||
Sbjct 17566 TCATGTAGGAGATGCTGGTGGTTATCCATTAGCAAAGCGATTCCCGATTAT 17516
>seq8686
Length=99304
Score = 235 bits (260), Expect = 1e-57
Identities = 234/299 (78%), Gaps = 3/299 (1%)
Strand=Plus/Minus
Query 22611 GCTTTTTTATTGCCGAAATTAGGGGGAAGGCATGGAATTTTGGAAATTCATTCAAGAGTT 22670
|||||||||||||| || | ||||| ||||||||||||||||||| |||||||| |
Sbjct 25754 GCTTTTTTATTGCCTTAAATCGGGGGT-GGCATGGAATTTTGGAAATGGTTTCAAGAGCT 25696
Query 22671 TCT-ACAGACTTTTGGCACAGCAATCACTTCATTTTTTATGGGGTTCATTATGGCTTATT 22729
| ||| |||||||| || |||||||||||||||||||||||||| | ||||||||||
Sbjct 25695 GATTACA-ACTTTTGGAACTGCAATCACTTCATTTTTTATGGGGTTTGTCATGGCTTATT 25637
Query 22730 TCCGAACGAAGAAAAAACTAGGTAAGGCTGATTGGGCTGAGTCCATTATGTGTGGGCTTT 22789
| |||||||| || || || || | |||| || ||||| || |||||||| ||||
Sbjct 25636 TACGAACGAAAAAGAAGGCTGGCAAAGGAGATTTCGCAGAGTCAATCATGTGTGGTCTTT 25577
Query 22790 TTTCAGTTGGTGTCTGGTCTTTACTTGAATGGCTAAATGTCCCACAGATTGTATCTGTTG 22849
|| | |||||||| ||| | || | || ||| | || | || || |||||| |||| |
Sbjct 25576 TTGCCGTTGGTGTTTGGACGTTTTTAGAGTGGATGCATATTCCGCAAATTGTAGCTGTCG 25517
Query 22850 GTATTGCTTCTGGCATTGGGTATATGGGCACTCATTTTGTCAGTAACTTAATTGAAAAG 22908
| | || ||||| || || |||||||| ||||||||||| ||||| |||||||||||
Sbjct 25516 GGCTGGCGTCTGGTATCGGTTATATGGGTACTCATTTTGTGAGTAATCTAATTGAAAAG 25458
>seq449
Length=15283
Score = 235 bits (260), Expect = 1e-57
Identities = 447/647 (69%), Gaps = 37/647 (6%)
Strand=Plus/Plus
Query 8519 AATCACACAACAAACCTGATCTACTTTTAACCGAACCTGTCCTTAGTGGCAGGttttttt 8578
|||||||||||||| || | | | | || |||| | |||| ||||||||
Sbjct 8293 AATCACACAACAAAGCTTAACCA-----ACCCTGACCTTTAATTAGATCAGGGTTTTTTA 8347
Query 8579 ATGCCTGAAATTCAGGCGAACA--CTGGCTAGGTTGATCCCCGAAA-AGCACACTTTTCA 8635
||||||||||| ||| || | | ||||| | |||||| | | ||||||
Sbjct 8348 ATGCCTGAAATAT-GGCATGCAAGCCGACTAGGGTAGCTCCCGAAGTAATGTATTTTTCA 8406
Query 8636 TGTTCAGTGCGCCTGCCAGTTCTTTTCTTT-GAACATGAGCGAGTAAGAGGAAA-TCTTA 8693
|||||| ||| || | | |||||||||| |||||||| ||||||||||| |||||
Sbjct 8407 TGTTCAATGCATTTGTCGGCTCTTTTCTTTTGAACATGATTTTGTAAGAGGAAAATCTTA 8466
Query 8694 TGAACATGATGACAACATTAAATTTACGTGCATTGGTTACCAATGATAACGGTGAA-CCA 8752
||||||||||| | ||||||||| | | |||| ||||| | || || ||| |||
Sbjct 8467 TGAACATGATGTTGAATTTAAATTTAAGAGGTATGGTCTCCAATCAAAATGGGGAAGCCA 8526
Query 8753 AGAACAACAAGTTATGCCGTTGCTGAAGCTTTTAACAAGACTCACAGCCATGTAATGCGA 8812
||| |||| ||||| || || ||||| || || ||| || ||||| |||||
Sbjct 8527 AGA-CAACCAGTTACGCTGTGGCTGAGGCGTTCGGTAAGCGGCATTCTGATGTACTGCGA 8585
Query 8813 GATATTAAGAAAATCATTAAGCAATGTGGTGAAGAATTTGCTAAATCCAATTTTGGATTA 8872
||||| || || | ||||| || ||||| | || |||||||| ||
Sbjct 8586 TCAATTAAAAATATGA------AATGTTCGCAAAAATTTCGTGAACGCAATTTTGCGTTT 8639
Query 8873 ACCTTTGAAAACAAAAGGATAGGGAACACAGAGCGTAAAACACCATTCTTTAGAATTTCA 8932
||||| ||||||||| |||||||||||| ||||| | || || | | |||
Sbjct 8640 ACCTTAGAAAACAAACAGATAGGGAACAC------TAAAAGAA-ATACTGGTTATTATCA 8692
Query 8933 AAAGA-------TGGATTCATGTTGCTTGTTATGGGTTTCACTGGCGAAAAGGCTATGAA 8985
| || |||||| ||||| | |||||||| || | ||| ||||| |||
Sbjct 8693 CATGACTGAGCGTGGATTTATGTTTTTAGTTATGGGATTTAATGGTGAAAAAGCTGACGC 8752
Query 8986 AACTAAA--ATCGAATTTATTAATGCCTTTAACTGGATGGCTAATCAACTCAGCCAAGTT 9043
|| |||| ||| |||||| |||| ||| | |||||||| |||||| | | |||| |
Sbjct 8753 AATTAAAGAATCC--TTTATTGATGCATTTGAATGGATGGCGAATCAATTAACCCAAATA 8810
Query 9044 TTCCAATCAAAATGGGCTAGATACAACCATGTTGTAGGTTACCGTGAAAGTCGTAAGCAA 9103
|||||||||||||||||| | ||| | || ||| ||||| || || | | ||||||
Sbjct 8811 TTCCAATCAAAATGGGCTCGTTACCAACAGCGTGTTGGTTATCGAGACAAGAGAAAGCAA 8870
Query 9104 CAAGTTAGTTGTTCAGCCCGTGACATGAACACTTGGAAGCATGAGAA 9150
| |||||||| |||||||| || ||||| | ||||||||||| ||
Sbjct 8871 GAGGTTAGTTGCTCAGCCCGAGATATGAATGCATGGAAGCATGAAAA 8917
>seq1918
Length=3315
Score = 228 bits (252), Expect = 2e-55
Identities = 170/199 (85%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 29574 TTAATTTTCTGGCCTAGCTTTCCTTCTTTTACCAACTGCACGACCTGCTCATTAGTAAGC 29633
||||| || || || ||||| ||||| || |||| ||| | || |||||||| ||||||
Sbjct 831 TTAATCTTTTGCCCAAGCTTACCTTCGTTGACCAGCTGTATAACTTGCTCATTTGTAAGC 772
Query 29634 ACAGGAATAAAGACTTTGTCGCCAATATCTTTGGAAAGAATCTTCACTTCTTCGGCTGTT 29693
||||| || || |||||||| ||||||||||| ||||||||||| ||||| || ||||||
Sbjct 771 ACAGGTATGAAAACTTTGTCACCAATATCTTTAGAAAGAATCTTGACTTCATCAGCTGTT 712
Query 29694 AGCACCAAAGCTTCACCATGTTTCGCAGCATCATTGATGCGAGCAATAATCTGATTGATT 29753
|||| ||| |||||||||||| |||||||||||||||||||||||||||||||||| | |
Sbjct 711 AGCATCAATGCTTCACCATGTGTCGCAGCATCATTGATGCGAGCAATAATCTGATTAACT 652
Query 29754 GGTAGTTTTGCGTTATCCA 29772
||||||||| ||| ||||
Sbjct 651 GGTAGTTTTAAGTTGTCCA 633
>seq8226
Length=5263
Score = 210 bits (232), Expect = 6e-50
Identities = 278/380 (73%), Gaps = 12/380 (3%)
Strand=Plus/Plus
Query 22934 ACAAGCAATTCTGGGCTGAAACTCATCAAAGACTTTGAGGGCAAGCGCCTTAATGCGTAT 22993
||||| || || || | || || ||||||| || ||||| || ||| | || || |||
Sbjct 1135 ACAAGTAACTCAGGAATCAATCTAATCAAAGGTTTCGAGGGTAAACGCTTGAAAGCCTAT 1194
Query 22994 GATGATGGGGTGGGTGTTTGGACTATTGGTTTTGGAACCATTAAGTATCCGAATGGTGTC 23053
|| ||||| ||||| ||||||| ||||| ||||| || ||||| ||||||||||||||
Sbjct 1195 GACGATGGTGTGGGCATTTGGACCATTGGATTTGGCACAATTAAATATCCGAATGGTGTG 1254
Query 23054 CGAGTGAAAAAAGGTGATACCTGCACTGAACAGCAAGCTGAAACCTATTTGAAAAATGAT 23113
|| || |||||||| ||||| ||||||||| ||||| ||| ||| | ||||||
Sbjct 1255 CGTGTCAAAAAAGGGGATACATGCACTGAATCTCAAGCAGAACAATATCTTCGCAATGAT 1314
Query 23114 TTA--ACTAAGTTTGAAGTAGCTATTAATAAATTAGTTAAAGTGCCTCTTAGTCAGAATC 23171
||| | || |||||| ||||| ||| || || |||||||| || | ||| || |
Sbjct 1315 TTAGTAGTA--TTTGAAAACGCTATCAATCGTTTGGTGAAAGTGCCACTCAATCAAAACC 1372
Query 23172 AATTCGATGCACTAGCATCTTTCACATATAATCTTGGTGAAACCAAT-TTAGCAAATTCA 23230
|||||||||| |||| || ||||| ||||| | |||||| |||| |||||||| |||
Sbjct 1373 AATTCGATGCTTTAGCTTCATTCACTTATAACTTGGGTGAAGGCAATCTTAGCAAA-TCA 1431
Query 23231 ACTTTATTGAAGAAACTTAAT---AAAGGTGACTATCAAGGCGCTGCTGACCAATTCCTT 23287
||| | | || || || ||| ||| |||||| |||| ||||| | |||| | |
Sbjct 1432 ACTCTGCTTAAAAAGCTAAATGCCAAA---GACTATAAAGGTGCTGCAGCTGAATTTCCT 1488
Query 23288 GTCTGGAATAAGGCAGGAGG 23307
||||| || || || ||
Sbjct 1489 AAATGGAACAAAGCTGGTGG 1508
>seq8225
Length=74308
Score = 206 bits (228), Expect = 7e-49
Identities = 275/378 (73%), Gaps = 8/378 (2%)
Strand=Plus/Plus
Query 22934 ACAAGCAATTCTGGGCTGAAACTCATCAAAGACTTTGAGGGCAAGCGCCTTAATGCGTAT 22993
||||| || || || | || || ||||||| |||||| || || || | || || |||
Sbjct 6 ACAAGTAACTCAGGAATCAATCTAATCAAAGGCTTTGAAGGTAAACGTTTAAAAGCTTAT 65
Query 22994 GATGATGGGGTGGGTGTTTGGACTATTGGTTTTGGAACCATTAAGTATCCGAATGGTGTC 23053
|| ||||| || ||||||||||| ||||| ||||| || ||||| || |||||||||||
Sbjct 66 GACGATGGCGTTGGTGTTTGGACCATTGGATTTGGCACAATTAAATACCCGAATGGTGTA 125
Query 23054 CGAGTGAAAAAAGGTGATACCTGCACTGAACAGCAAGCTGAAACCTATTTGAAAAATGAT 23113
|| || |||||||| ||| ||||||||| ||||| ||| ||| | ||||||
Sbjct 126 CGTGTTAAAAAAGGCGATGTATGCACTGAATCTCAAGCAGAACAATATCTTCGTAATGAT 185
Query 23114 TTAACTAAGTTTGAAGTAGCTATTAATAAATTAGTTAAAGTGCCTCTTAGTCAGAATCAA 23173
|| | |||||| ||||| ||| ||| || ||||| ||||||| ||| || |||
Sbjct 186 TTGGTTGTATTTGAAAACGCTATCAATCGATTGGTGAAAGTACCTCTTAATCAAAACCAA 245
Query 23174 TTCGATGCACTAGCATCTTTCACATATAATCTTGGTGAAACCAAT-TTAGCAAATTCAAC 23232
|||||||| |||| || ||||| ||||| | |||||| |||| |||||||| |||||
Sbjct 246 TTCGATGCTTTAGCTTCATTCACTTATAACTTGGGTGAAGGCAATCTTAGCAAA-TCAAC 304
Query 23233 TTTATTGAAGAAACTTAAT---AAAGGTGACTATCAAGGCGCTGCTGACCAATTCCTTGT 23289
| | | || || || ||| ||| |||||| |||| ||||| | |||| | |
Sbjct 305 TCTGCTTAAAAAGCTAAATGCCAAA---GACTATAAAGGTGCTGCAGCTGAATTTCCTAA 361
Query 23290 CTGGAATAAGGCAGGAGG 23307
||||| || || || ||
Sbjct 362 ATGGAACAAAGCTGGTGG 379
>seq10131
Length=28935
Score = 185 bits (204), Expect = 2e-42
Identities = 430/641 (67%), Gaps = 28/641 (4%)
Strand=Plus/Plus
Query 37355 TATGAATGCAGTAGCAGTTGAGAAGTTTGAACGTTTTGAATGGTTGACTCATGGTTTAAC 37414
|||||| |||||||||| |||||||||||| || || |||||||||||||| | ||
Sbjct 10504 TATGAACGCAGTAGCAG---AGAAGTTTGAACAATTCGAGTGGTTGACTCATGGCATCAC 10560
Query 37415 TGCGAGTTCACC--AAGT-ATTGAGCCAGTGGTCCGC--GGAACAGGAGAGAAACCATTG 37469
||| | ||||| || | | ||| || || || |||||||||||||| |||
Sbjct 10561 TGCTAAGTCACCGCAATTCAATGA-----TGAGACGAAAGGCACAGGAGAGAAACCTTTG 10615
Query 37470 AACTATCAAGACCGCTTGGGTGCTATTGCTTCAATGGATACCCAGTTAGCAAAGTCAGTG 37529
|||||||||| ||||||||||||||||| ||||| |||||||| | || |||||
Sbjct 10616 GACTATCAAGATCGCTTGGGTGCTATTGCGAGCATGGAAACCCAGTTGGAGAAATCAGTA 10675
Query 37530 ACAGCGCTTATTGTATTTGAAGGCAAGTCAGAAAGTGATTATGAGTATGTTCGTAATCAC 37589
||| | || || | | || | || | | ||||| ||||||| | | ||||||||
Sbjct 10676 ACATCTCTAATCATCTATGGTGAAAATGCCAAGAGTGACTATGAGTTTATCCGTAATCAT 10735
Query 37590 TTGGCTAAGATCATGATTCAAAATGCCG--TA-GTTGATAAGAAGCGAGAGCCTGAACAT 37646
| ||||| || ||||| |||| | || | ||||| || ||||| || |||
Sbjct 10736 CTAGCTAAAATTATGATG---AATGGAGCTTATGAAGATAAACGTCGTGAGCCAGAGCAT 10792
Query 37647 GTCGCTATATATCACTTGGCATGGTTGATTGCTCGCCTAGTATTAGACTTCGCATTAAAT 37706
| || || ||||| || | ||| || |||| | | || ||| || || | ||
Sbjct 10793 ATTGCGATTTATCATTTATCTTGGCTGGTTGCAGGTATGGTCATAGCTTTTGCTATGGAT 10852
Query 37707 CCAGAGTTAGAAGAACA-TTACACAGCTAAAGGGCGCTTGGCTTATGCAG--GGC-TTAA 37762
|| || || || || || ||| || ||||| | ||| || || | ||| ||||
Sbjct 10853 CCTGAACATGA-GAGCAATTTCACCGCAAAAGGAAGATTGCATTTAGCTGCTGGCGTTAA 10911
Query 37763 GAGTCATCAGATGAATGTAGAGTGCTACCGAAAGACATGGAAGCCTTATGAAACATTGAT 37822
| | ||||||||| || || || ||||||||||| ||| |||| ||||
Sbjct 10912 GTCTTATCAGATGACGTTAAAGGCATATGATTCGACATGGAAGCGTTACGAAAATATGAT 10971
Query 37823 GACTTTAGCAATTGANNNNNNNNNNNNNNNNNNNGGCAAAGCAGTTGAAGCCTACAAAAG 37882
|| | | || | || | |||| |||||| |||| |
Sbjct 10972 GATTATCGCTTTAGAAACTTCCATCAAATGTGCTGCGGAAGCGGTTGAAAAGTACAGGAA 11031
Query 37883 AAATACTTACAAAGATATGAAAGCGTA--GGTATTCCATTATTGCGGAAACAAGAGTATA 37940
||||||||||||||| | |||| ||| | || | | | || | | || | |||||
Sbjct 11032 AAATACTTACAAAGAATTTAAAGTGTAAGGCTAGTAAAATTTTCCTG--ACTAAGGTATA 11089
Query 37941 GTTTTTATATACTGGTCGTATTACGGTTTATCCGAGACCAA 37981
|||||||||||||||||||||||||||| | || |||||||
Sbjct 11090 GTTTTTATATACTGGTCGTATTACGGTTCACCCAAGACCAA 11130
Score = 131 bits (144), Expect = 4e-26
Identities = 236/345 (68%), Gaps = 0/345 (0%)
Strand=Plus/Plus
Query 33252 AAAGCTATTGGTGAAATCTCAAAAGGGTTGAAAGCAATCGCTAAAGAATTTGATTGCGTT 33311
|||| |||||| || || ||| | |||||| || ||| || ||||| ||
Sbjct 8016 AAAGATATTGGCGAGATTTCAGGGGAATTGAAAAAGATTGCTCGTGATTTTGAGTGTCCA 8075
Query 33312 GTATTCGCTCTATCTCAGCTTAGCCGCAACTTAGAGAACAGACCTAACAAACGTCCAGTT 33371
||||| ||| || |||| || | ||| ||| | || |||||||| || ||||| || ||
Sbjct 8076 GTATTTGCTTTAGCTCAACTCAACCGAAACCTTGAAAACAGACCAAATAAACGCCCTGTA 8135
Query 33372 AATGCTGATCTCCGCGAATCTGGCCAATTGGAGCAGGATGCGGACGTGATTCTATTCATT 33431
|| |||||| | || || || | || |||||||| || ||| | || | || |||
Sbjct 8136 AACGCTGATTTAAAAGAGTCAGGTGATTTAGAGCAGGACGCAGACATCATCATGTTTATT 8195
Query 33432 TACCGCGACGAAGTTTACGACAAGAACTCAAAAGATGCAGGAACTGCTGAAATCATCATC 33491
||||| ||||| |||||| ||||| | || ||||| || ||||| ||||||||||| ||
Sbjct 8196 TACCGTGACGAGGTTTACAACAAGGAATCTAAAGAGGCTGGAACGGCTGAAATCATTATT 8255
Query 33492 GGAAAGTGCCGTGATGGAGAGGTGGGAACTGTACGTCTAGGTACTGATTTAGCAAGAGCA 33551
|| || ||| | || ||||| || ||| || || ||||| | ||
Sbjct 8256 GGTAAAGCACGTAACGGGTCAACTGGAACAGTGAAATTAGCAACCGACTTAGCTCGCTCA 8315
Query 33552 ACATTTGCAGATCTTGATCCTGCTTATCTCGCTAGCTTGCAAGGG 33596
|||||||||||| | ||||| ||| ||| | ||| ||||
Sbjct 8316 ACATTTGCAGATTTAAGTCCTGAATATTACGCAATGATGCGAGGG 8360
>seq9034
Length=15118
Score = 163 bits (180), Expect = 7e-36
Identities = 251/354 (71%), Gaps = 8/354 (2%)
Strand=Plus/Minus
Query 22958 ATCAAAGACTTTGAGGGCAAGCGCCTTAATGCGTATGATGATGGGGTGGGTGTTTGGACT 23017
||||||| |||||| || || ||| | || || ||||| ||||| ||||| |||||||
Sbjct 10297 ATCAAAGGCTTTGAAGGTAAACGCTTGAAAGCTTATGACGATGGTGTGGGCATTTGGACC 10238
Query 23018 ATTGGTTTTGGAACCATTAAGTATCCGAATGGTGTCCGAGTGAAAAAAGGTGATACCTGC 23077
||||| ||||| || || || || || || ||||| || || |||||||||||||| |||
Sbjct 10237 ATTGGATTTGGCACAATCAAATACCCTAACGGTGTGCGTGTAAAAAAAGGTGATACATGC 10178
Query 23078 ACTGAACAGCAAGCTGAAACCTATTTGAAAAATGATTTAACTAAGTTTGAAGTAGCTATT 23137
|||||| ||||| ||| ||| | ||||| || | |||||| |||||
Sbjct 10177 ACTGAATCTCAAGCAGAAGAATATCTTCGTAATGACCTAGTTGTATTTGAAAATGCTATC 10118
Query 23138 AATAAATTAGTTAAAGTGCCTCTTAGTCAGAATCAATTCGATGCACTAGCATCTTTCACA 23197
||| || || || || || || | || || ||||||||||| |||| || || ||
Sbjct 10117 AATCGCTTGGTGAAGGTTCCGCTCAACCAAAACCAATTCGATGCTTTAGCCTCATTTACC 10058
Query 23198 TATAATCTTGGTGAAACCAAT-TTAGCAAATTCAACTTTATTGAAGAAACTTAAT---AA 23253
|| || | || ||| |||| |||| |||| ||||| | | || || || ||| ||
Sbjct 10057 TACAACTTGGGCGAAGGCAATCTTAGTAAAT-CAACTCTGCTTAAAAAGCTCAATGCCAA 9999
Query 23254 AGGTGACTATCAAGGCGCTGCTGACCAATTCCTTGTCTGGAATAAGGCAGGAGG 23307
|| |||| |||| ||||||| | |||| | ||||||||||| || ||
Sbjct 9998 AG---ACTACAAAGGTGCTGCTGCCGAATTTCCAAAGTGGAATAAGGCTGGTGG 9948
>seq7305
Length=28244
Score = 145 bits (160), Expect = 2e-30
Identities = 225/317 (71%), Gaps = 11/317 (3%)
Strand=Plus/Minus
Query 11513 AGGAGACGCC-ATGAAAACTACAAAATTAAACTATCGCTTAGCAGATGGTTATGGCATCG 11571
|||||| || ||||| | || ||||||| | | || || ||||| ||||| ||
Sbjct 25964 AGGAGATGCGTATGAACAATAATAAATTAATTTCTTATTTCGCTGATGGCTATGGTATTA 25905
Query 11572 GCTAGTTTACAAAAGAATACAAATAAAGCATCCTATTATGGGTGCTTTATTTTTATGAGT 11631
||||||||||| | ||| ||||||||||||||||| |||||||||||||||||| |
Sbjct 25904 GCTAGTTTACATTTTATTACGAATAAAGCATCCTATTAAGGGTGCTTTATTTTTATGTGA 25845
Query 11632 ATAAAATGGTAATTGATAACATATTATTACTAAGAACAATTTTATTATTTTTACCTTATT 11691
||||||||| ||||||||| || ||| || ||||||| | | | ||| || | |
Sbjct 25844 ATAAAATGGAAATTGATAATATTTTACTATTAAGAACCTTACTTCTGGCTTTGCCATTTA 25785
Query 11692 TTGGCCT---TTGGTATTTCTTTGATAAGAGAATTAAAGATAAATTCTTCTTAAAGCCGC 11748
| | || ||| ||||| ||| || || || ||| | ||||||||||| ||
Sbjct 25784 TAGTTCTTTATTGCTATTTTTTTTAT---TTTATAAAGGATGATTTCTTCTTAAAACCTA 25728
Query 11749 GAACCCATATGCAATTAAATTTCATAATGATTGCATTGGTTATTG--TTTTCGCAGAACT 11806
||| |||| || ||||| | |||||| || | || || |||| ||| || |
Sbjct 25727 GAAATTATATACAGTTAAACATAATAATGTTTTCTTTAGTAATTGCCTTTATGCTTA--C 25670
Query 11807 AGTATATTGGAATCTAT 11823
||| ||||||||| |||
Sbjct 25669 AGTGTATTGGAATTTAT 25653
Score = 107 bits (118), Expect = 5e-19
Identities = 68/74 (92%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 8516 CTTAATCACACAACAAACCTGATCTACTTTTAACCGAACCTGTCCTTAGTGGCAGGtttt 8575
||||||||||||||||||| || ||||||||| ||||||||||||||||| ||||||||
Sbjct 13893 CTTAATCACACAACAAACCGGAATTACTTTTAAACGAACCTGTCCTTAGTGACAGGTTTT 13834
Query 8576 tttATGCCTGAAAT 8589
|| |||||||||||
Sbjct 13833 TTAATGCCTGAAAT 13820
>seq6169
Length=202695
Score = 131 bits (144), Expect = 4e-26
Identities = 248/359 (69%), Gaps = 21/359 (6%)
Strand=Plus/Plus
Query 22979 CGCCTTAATGCGTATGATGATGGGGTGGGTGTTTGGACTATTGGTTTTGGAACCATT--A 23036
|| || || |||||||| ||||| || ||||||||||||||||||| ||| || | | |
Sbjct 2885 CGACTCAAAGCGTATGACGATGGTGTAGGTGTTTGGACTATTGGTTATGGCACAACTGCA 2944
Query 23037 AGTATCCGAATGGTGTCCGAGTGAAAAAAGGTGATACCTGCACTGAACAGCAAGCTGAAA 23096
| || |||||||| ||| || ||||||||||| ||||||| | |||||| |
Sbjct 2945 ATTA-----ATGGTGTCGCAGTTAAGAAAGGTGATACTTGCACTGCTGAACAAGCTAAGT 2999
Query 23097 CCTATTTGAAAAATGATTTAACTAAGTTTGAAGTAGCTATTAATAAATTAGTTAAAGTGC 23156
|||| || | ||||||| || |||||| ||| | |||| | |||||||| |
Sbjct 3000 CCTACATGGCTCAAGATTTAAAGAAATTTGAATCTGCTGTAAATACTTCGGTTAAAGTTC 3059
Query 23157 CTCTTAGTCAGAATCAATTCGATGCACTAGCATCTTTCACATATAATCTTGG---TGAAA 23213
| | | || ||||| |||||||| | | ||| || || || || |||| ||
Sbjct 3060 CATTAAACCAAAATCAGTTCGATGCTTTGGTATCATTGACTTACAACATTGGCACTGGTG 3119
Query 23214 CCAATTTAGCAAATTCAACTTTATTGAAGAAACTTAA----TAAAGGTGACTATCAAGGC 23269
| ||||| | | ||||| || | || ||| |||| |||| || ||| |||||
Sbjct 3120 C--ATTTA-AAGACTCAACACTACTCAA-AAAGTTAAATGCTAAA---GATTATAAAGGC 3172
Query 23270 GCTGCTGACCAATTCCTTGTCTGGAATAAGGCAGGAGGCAAAGTTATGAAAGGTCTAGT 23328
||||| | ||||| | ||||| || | ||| ||||| |||||| |||| || ||
Sbjct 3173 GCTGCAGCTCAATTTGATCGATGGAACAAAGGAGGTGGCAAGGTTATGCAAGGGCTTGT 3231
>seq8065
Length=27066
Score = 127 bits (140), Expect = 5e-25
Identities = 195/278 (70%), Gaps = 0/278 (0%)
Strand=Plus/Minus
Query 36757 TGCCGTCAGCTAGATGTGATGAAGATCGCTTACGAACAGGAGTTTAGATTCCATCCTGAG 36816
|||||||| ||||| | |||| || | || | || ||||||| || |||||||||
Sbjct 17586 TGCCGTCACCTAGACGCTTTGAAAATTGAATATGTGCAAGAGTTTAAGTTTCATCCTGAG 17527
Query 36817 CGTCGTTGGAAGGCGGACTTTCGGATTGAAGGTTATCCAATCTTAGTCGAAGTCGAAGGT 36876
|| |||||||| || ||||| ||||| || |||||||| || || || || |||||
Sbjct 17526 CGGAAGTGGAAGGCTGATTTTCGCATTGAGGGCTATCCAATTTTGGTTGAGGTAGAAGGA 17467
Query 36877 GGAGCATTTAGCAATGGACGTCACACCAGAGGCGAAGGCTACACAGCAGACTGCGAGAAA 36936
|| | || ||| || ||||| |||||| |||| || ||||||| || ||||||
Sbjct 17466 GGTGTGTTCTCAGGTGGTCGGCACACAAGAGGCAAAGGTTATTCAGCAGATTGTGAGAAA 17407
Query 36937 TACTCAGTTGCAGCTATTCACGGATGGACTGTAATTCGTGGCACTACAAAGCAAGTTCAA 36996
||| | ||||| || | || ||| || ||||| || |||||| | || || |
Sbjct 17406 TACAGTGCAGCAGCAATCCTTGGTTGGGTAGTGATTCGAGGTACTACAGAACAGGTAAAG 17347
Query 36997 AGCGGCTTAGTGCTCAATTGGATTGAAGAAGCAATGAA 37034
| || | || | ||||||||||||||| || ||
Sbjct 17346 AAAGGGATTGTCGTTGGTTGGATTGAAGAAGCGATTAA 17309
Score = 84.2 bits (92), Expect = 6e-12
Identities = 151/210 (72%), Gaps = 13/210 (6%)
Strand=Plus/Minus
Query 28809 CATAATCTTCTCACTCATTGAGTAAAAGTCCCGTCGGTCGAATG-TCTGGGA-CTTTTTT 28866
|||||| ||||||||| ||||||||||| | | | | | | || | | |||||||
Sbjct 25169 CATAATATTCTCACTCTTTGAGTAAAAGCACATTAGATTTAGCGGTCGGTGTGCTTTTTT 25110
Query 28867 GTTATCTGGTGAGATTTATTAAACCAAAGGTATAAAATAAAAG-CAAGCATAAATTAAAC 28925
||| | || |||||||||| | | | ||| ||| || || |||| ||| | |||
Sbjct 25109 GTTTT-TGATGAGATTTATATTAACTATGGT-TAATTTATTAGTCAAGAGAAAAGTTAAC 25052
Query 28926 CATAGGTGAAAATAATTTATGATTAG--GTTTAAATATGCTTTAATAGGCAAAAGAAAAC 28983
|| ||| || | ||||| | | | ||||| ||||||||||| |||||||||||
Sbjct 25051 AAT-GGTTAACCTT-TTTATTAATTGTAGTTTA----TGCTTTAATAGACAAAAGAAAAC 24998
Query 28984 CCACACGGGGTGGGTTATTTGGAGTTTATT 29013
|||||| ||||||||| |||||| || ||
Sbjct 24997 CCACACTGGGTGGGTTGGTTGGAGGTTGTT 24968
>seq376
Length=32578
Score = 127 bits (140), Expect = 5e-25
Identities = 138/183 (75%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 25687 TGGCTTTTTCTAGCTCTGCTCTAAGTCTGTCAATTTCACATGCTGCATGGTGACAAATAA 25746
||||||| ||| || ||||||||||| ||||||||| |||||||| |||||||| |
Sbjct 922 TGGCTTTGGCTAACTTTGCTCTAAGTCGATCAATTTCATTTGCTGCATAATGACAAATTA 863
Query 25747 CACGTAATTCATCTTCGTTATATTCATCTGCATGCATCATCATTAAATGACTGATTTCGG 25806
||||| |||||||| || || ||||| || | ||||||||||| ||||| |
Sbjct 862 GACGTACATCATCTTCATTGTAATCATCAATGTGAGAAGTAATTAAATGACTAATTTCAG 803
Query 25807 TGCCAAATTGATTATCACCATCGAACACCCAAACAAAACCATCATCTTGTTCAAAGCGTA 25866
|||| ||| |||||||| || |||||||| | |||| ||||| ||||| ||||
Sbjct 802 TGCCTTGATGACTATCACCACTAAATACCCAAACCGCATCATCTTCTTGCTCAAAACGTA 743
Query 25867 AAT 25869
|||
Sbjct 742 AAT 740
>seq12839
Length=204338
Score = 113 bits (124), Expect = 1e-20
Identities = 226/330 (68%), Gaps = 4/330 (1%)
Strand=Plus/Minus
Query 33204 GACTATCTGCAAATCATGAAAAGCCCAGTAGTTACCGACAACCAAGTTAAAGCTATTGGT 33263
|| ||||||||| | |||||| |||| | || |||| ||| | ||||||
Sbjct 82002 GATTATCTGCAATTGATGAAAGTACCAGGCATGGGTGATAACCGTGTTGGTGAGATTGGT 81943
Query 33264 GAAATCTCAAAAGGGTTGAAAGCAATCGCTAAAGAATTTGAT-TGCGTTGTATTCGCTCT 33322
||||| ||| | | || ||||| | || || ||| | ||| ||| ||| | || ||
Sbjct 81942 GAAATTTCACGAAGCTTAAAAGCCCTTGCCAAGGAAAT-GATGTGCCCTGTTATTGCACT 81884
Query 33323 ATCTCAGCTTAGCCGCAACTTAGAGAACAGACCTAACAAACGTCCAGTTAATG-CTGATC 33381
|| ||||||| ||| | || ||| | || || |||||||| || |||| | ||
Sbjct 81883 GTCACAGCTTAACCGTTCTCTGGAAAACCGTCCAAATAAACGTCCGGT-AATGTCCGACT 81825
Query 33382 TCCGCGAATCTGGCCAATTGGAGCAGGATGCGGACGTGATTCTATTCATTTACCGCGACG 33441
| || ||||| || | | ||||||||||| || | ||| | || |||||||| || |
Sbjct 81824 TACGTGAATCAGGTGCAATCGAGCAGGATGCCGATTTAATTATGTTTATTTACCGTGATG 81765
Query 33442 AAGTTTACGACAAGAACTCAAAAGATGCAGGAACTGCTGAAATCATCATCGGAAAGTGCC 33501
| ||||| |||| | || ||||| ||||| || |||||||| ||||| || || |
Sbjct 81764 AGGTTTATAACAAAGAGTCGAAAGAAGCAGGCACAGCTGAAATTATCATTGGTAAACAAC 81705
Query 33502 GTGATGGAGAGGTGGGAACTGTACGTCTAG 33531
|| |||| | | || ||||| ||| |||
Sbjct 81704 GTAATGGCCCGATCGGGACTGTGCGTTTAG 81675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130251903455938
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |