Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_031117.1
Length=44885
Score E
Sequences producing significant alignments: (Bits) Value
seq10131 86.0 2e-12
>seq10131
Length=28935
Score = 86.0 bits (94), Expect = 2e-12
Identities = 164/242 (68%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 32360 GAATTTGATTGTCCTGTTTTTTGTTTAGCGCAATTAAGCCGAAGCTTAGAATCCAGAAAA 32419
|| ||||| ||||| || ||| |||||| ||| | | ||||| | | ||| |||| |
Sbjct 8061 GATTTTGAGTGTCCAGTATTTGCTTTAGCTCAACTCAACCGAAACCTTGAAAACAGACCA 8120
Query 32420 GATAGACGACCTCTAATGTCTGACATTCGTGAGTCGGGATCTATTGAAGAGGACGCAGAT 32479
||| ||| ||| ||| |||| | ||||| || | | || ||||||||||
Sbjct 8121 AATAAACGCCCTGTAAACGCTGATTTAAAAGAGTCAGGTGATTTAGAGCAGGACGCAGAC 8180
Query 32480 GTGATCATGTTTATATATCGTGATGAGTATTATGATAAAAACTCAAAGGATCAAGGTATT 32539
| ||||||||||| || ||||| ||| ||| | || | || || || || |
Sbjct 8181 ATCATCATGTTTATTTACCGTGACGAGGTTTACAACAAGGAATCTAAAGAGGCTGGAACG 8240
Query 32540 GCTGAAATAATTGTAGCTAAAGCGCGTGATGGTGAGGTTGGAACGGTTAGATTAGCAACT 32599
|||||||| ||| | | |||||| ||| | || |||||| || | |||||||||
Sbjct 8241 GCTGAAATCATTATTGGTAAAGCACGTAACGGGTCAACTGGAACAGTGAAATTAGCAACC 8300
Query 32600 GA 32601
||
Sbjct 8301 GA 8302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 143484736663026
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |