Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_031230.1 Length=98136 Score E Sequences producing significant alignments: (Bits) Value seq9463 100 2e-16 >seq9463 Length=63583 Score = 100 bits (110), Expect = 2e-16 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 46298 TCGCCAGTCTGCCATTCATCTACCCCCACGTTGCGCTGATGCCAGATGCTCACGCAGGCA 46357 ||||||| ||||| |||||| || ||||| ||| ||||||| || | ||| |||| Sbjct 40951 TCGCCAGCCTGCCGTTCATCCACAAGCACGTGGCGGTGATGCCCGACGTGCACTGGGGCA 40892 Query 46358 AGGGGTCTGCCGTGGGCACGGTGATCCCCACCAAGGACGCCGTCATCCCAGCGGCCGTGG 46417 ||| | |||| ||| |||| ||||| ||| | || ||||||| ||||| || | Sbjct 40891 TGGGCGCCACCGTCGGCTCGGTCATCCCGACCGTCGGGGCGATCATCCCGGCGGCGGTCG 40832 Query 46418 GTGTCGACATCGGTTGCGGGATGATCGGCGTGGAGACCTGGGTCC 46462 | ||||||||||| ||||| ||||| | ||| ||||| | ||| Sbjct 40831 GCGTCGACATCGGCTGCGGCATGATGGCGGTGTGGACCTCGATCC 40787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313852787533803