Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_031274.1
Length=50509
Score E
Sequences producing significant alignments: (Bits) Value
seq9673 91.5 5e-14
seq9910 82.4 2e-11
>seq9673
Length=4878
Score = 91.5 bits (100), Expect = 5e-14
Identities = 62/70 (89%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 45664 TGGCGTTCCGTACAGGATTCGAACCTGTAACCCACAGCTTAGAAGGCTGTAGCTCTATCC 45723
||||| ||| ||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct 562 TGGCGATCCCGACAGGATTCGAACCTGTGACCCACAGCTTAGAAGGCTGTTGCTCTATCC 503
Query 45724 TATTGAGCTA 45733
|||||||
Sbjct 502 AGCTGAGCTA 493
>seq9910
Length=308115
Score = 82.4 bits (90), Expect = 2e-11
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 45664 TGGCGTTCCGTACAGGATTCGAACCTGTAACCCACAGCTTAGAAGGCTGTAGCTCTATCC 45723
|||| | || |||||| ||||||||||||||| ||||||||||||||| |||||||||
Sbjct 244672 TGGCCTGCCCGACAGGAATCGAACCTGTAACCCCCAGCTTAGAAGGCTGGTGCTCTATCC 244731
Query 45724 TATTGAGCTA 45733
||||||||
Sbjct 244732 GGTTGAGCTA 244741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 161478318374018
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |