Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_031944.1
Length=185102
Score E
Sequences producing significant alignments: (Bits) Value
seq9026 89.7 6e-13
seq7099 86.0 7e-12
>seq9026
Length=54586
Score = 89.7 bits (98), Expect = 6e-13
Identities = 60/67 (90%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 165494 TTAGCTCAGCGGTAGAGCACCTCGTTTACACCGAGATTGTCGGGGGTTCGATCCCCTCAT 165553
|||||||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct 51122 TTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGAGGGTCGGGGGTTCGATCCCCTCAC 51063
Query 165554 CTCCCAC 165560
|||||
Sbjct 51062 TGCCCAC 51056
>seq7099
Length=100963
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 165488 GGGAGATTAGCTCAGC-GGTAGAGCACCTCGTTTACACCGAGATTGTCGGGGGTTCGATC 165546
||| ||||||||||| |||||||| |||||||||||||||| |||||| ||||||| |
Sbjct 78770 GGGCGATTAGCTCAGTTGGTAGAGCGTCTCGTTTACACCGAGAATGTCGGCGGTTCGAGC 78711
Query 165547 CCCTCATCTCCCAC 165560
|| ||||| |||||
Sbjct 78710 CCGTCATCGCCCAC 78697
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592086926053680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |