Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq899 170 4e-37
seq12661 154 3e-32
seq9853 152 1e-31
seq9676 149 1e-30
seq6889 145 2e-29
seq3764 140 7e-28
seq504 138 2e-27
seq9216 120 6e-22
seq8560 114 3e-20
seq7743 113 9e-20
seq11974 107 4e-18
seq10703 107 4e-18
seq7352 105 1e-17
seq11633 102 2e-16
seq7823 98.7 2e-15
seq3353 98.7 2e-15
seq330 98.7 2e-15
seq6169 96.9 7e-15
seq8424 93.3 9e-14
seq14001 89.7 1e-12
seq6556 89.7 1e-12
seq4752 89.7 1e-12
seq4411 89.7 1e-12
seq3570 89.7 1e-12
seq5233 87.8 4e-12
seq9118 86.0 1e-11
>seq899
Length=2520420
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| | ||||| || ||||| || | ||| ||||| ||||||||||||||||
Sbjct 2264630 CCACCTCTGAGGCGGAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAC 2264689
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| ||||| || || ||||||||||||||||||| | || ||||| ||
Sbjct 2264690 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGG 2264749
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||| |||||||||||||| || || ||| | ||||| ||||| | || ||
Sbjct 2264750 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 2264809
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| |||||||| ||||| ||||| ||||||||
Sbjct 2264810 TCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 2264856
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| | ||||| || ||||| || | ||| ||||| ||||||||||||||||
Sbjct 2264858 CCACCTCTGAGGCGGAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAC 2264917
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| ||||| || || ||||||||||||||||||| | || ||||| ||
Sbjct 2264918 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGG 2264977
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||| |||||||||||||| || || ||| | ||||| ||||| | || ||
Sbjct 2264978 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 2265037
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| |||||||| ||||| ||||| ||||||||
Sbjct 2265038 TCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 2265084
Score = 167 bits (184), Expect = 5e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| | ||||| || ||||| || | ||| ||||| ||||||||||||||||
Sbjct 2265086 CCACCTCTGAGGCGGAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAC 2265145
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| ||||| || || ||||||||||||||||||| | || ||||| ||
Sbjct 2265146 AGGGTGCGTCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGG 2265205
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||| |||||||||||||| || || ||| | ||||| ||||| | || ||
Sbjct 2265206 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 2265265
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| | ||||| ||||| |||||||| ||||| ||||| ||||||||
Sbjct 2265266 TCCAAGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 2265312
Score = 163 bits (180), Expect = 6e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| || | || ||| || |||| || | ||| ||||| ||||||||||||||||
Sbjct 2264401 ACCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGA 2264460
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||| ||||| || || ||||||||||||||||||| | || ||||| ||
Sbjct 2264461 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGG 2264520
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||| |||||||||||||| || || ||| | ||||| ||||| | || ||
Sbjct 2264521 GATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCAC 2264580
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| |||||||| ||||| ||||| ||||||||
Sbjct 2264581 CTCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 2264628
Score = 141 bits (156), Expect = 2e-28
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| | ||||| || ||||| || | ||| ||||| ||||||||||||||||
Sbjct 2265314 CCACCTCTGAGGCGGAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAC 2265373
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| ||||| || || |||||||||||||||||||| | |||||||| ||
Sbjct 2265374 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGTTGGTCTGGGGGG 2265433
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| || || || ||||| ||||| | || || | ||||| ||||| | || ||
Sbjct 2265434 ATGCCTTCTTTTTCTTGTATCTTCACCTTGACATTCTCGATGGTGTCACTTGGCTCCACC 2265493
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103
|| ||||| || || ||||| || | ||||| || || ||||||||| ||
Sbjct 2265494 TCCAGAGTAATGGTTTTACCAGTGAGGGTCTTTACAAAGATCTGCATTGTC 2265544
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 2277519 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 2277461
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 2280380 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 2280322
>seq12661
Length=3984070
Score = 154 bits (170), Expect = 3e-32
Identities = 166/220 (75%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 282880 GCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGC 282939
|||| ||||| ||||| || | ||| ||||| ||||| |||||||| | | |||
Sbjct 2676674 GCAGACGAAGCACCAGGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAAAGTGA 2676615
Query 282940 GGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCT 282999
|||||||||| || ||||| || |||||||||| || || |||||| || || ||||
Sbjct 2676614 GGCCATCCTCCAGCTGTTTGCCCGCAAAGATCAGACACTGCTGGTCAGGTGGGATGCCCT 2676555
Query 283000 CCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAG 283059
||||||||||||| || ||||| || | || ||||||| | ||||| || || |
Sbjct 2676554 CCTTGTCTTGGATTTTGGCTTTGACATTCTCAGTAGTGTCACTGGGCTCGACCTCAAGGG 2676495
Query 283060 TGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||| ||||| ||||||| ||||| || || ||||||||
Sbjct 2676494 TGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2676455
>seq9853
Length=4041771
Score = 152 bits (168), Expect = 1e-31
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| || ||||| ||||| ||||| || | ||| ||||| ||||| |||||||| |
Sbjct 359783 CCGCCTCGCAGACGAAGCACCAGGTGCAGGGTGAACTCTTTCTGGATATTGTAGTCTGAC 359842
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||||||||||| || ||||| |||| ||||||| ||| || ||||| ||
Sbjct 359843 AGAGTGCGGCCATCCTGCAGCTGTTTGCCGGAGAAGATCAGACGCTGCTGGTCTGGTGGG 359902
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||| ||||||||| || ||||| || | || || ||||| | |||||
Sbjct 359903 ATGCCCTCCTCGTCTTGGATTTTGGCTTTGACACTTTCAATGGTGTCACTGGGCTCGACC 359962
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| |||||||| ||||| ||| ||| ||||| || || ||||||||
Sbjct 359963 TCAAGAGTGATGGTCTTGCCCATCAGCGTCTTCACAAAGATCTGCAT 360009
>seq9676
Length=343241
Score = 149 bits (164), Expect = 1e-30
Identities = 322/475 (68%), Gaps = 14/475 (3%)
Strand=Plus/Plus
Query 301318 AAATTTATGTTCATCACCGGCGGCGTTTCAAGTTCATTGGGGAAAGGCCTCGCTGCTGCG 301377
|||| | | ||| | || ||||| ||| | |||| | || ||||| |||| || ||
Sbjct 65459 AAATATGTATTCGTTACTGGCGGTGTTGTATCTTCACTTGGTAAAGGTATCGCAGCGGCC 65518
Query 301378 AGTATCGCCAGTTTACTAGAGAGGCGATGCTT-AAAGATAGCGATGCTTAAAATGGACCC 301436
|| | | | | | ||||| ||| | | |||| || | ||||| || |||| ||
Sbjct 65519 AGCCTAGGCGCTATTTTAGAGTCGCGCGGTATCAAAGTTACC-ATGCTAAAGCTGGATCC 65577
Query 301437 CTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGTTCGTGAC 301496
||| |||||||| ||||| || || ||| || |||||| || ||||| ||||| ||
Sbjct 65578 CTACATCAACGTTGATCCTGGCACCATGTCTCCCTTTCAACACGGCGAAGTATTCGTTAC 65637
Query 301497 GGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCACTTCATTAAC 301556
||||| ||||| || || ||||||||| | || || ||||| || || | ||| | |
Sbjct 65638 CGATGACGGTGCGGAGACGGATCTGGATTTAGGCCATTACGAGCGCTTTA--TCAGCAGC 65695
Query 301557 CCTT-----AAGCGTGAAAGTAATTTTACGACTGGCCAAGTTTATTTAAAAGTTATCGAA 301611
| | ||||| | |||||| || || || ||| |||| | || || ||
Sbjct 65696 CGTATGTCCAAGCGCAA---TAATTTCACCACCGGTCAAATTTACGAGACCGTGATTAAA 65752
Query 301612 AATGAACG-CGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTGTTCCCCACATCACCGA 301670
|| ||||| || || || ||| | || || || || || || |||| |||||||||||
Sbjct 65753 AAAGAACGTCGCGGGGAG-TATTTGGGCAAAACCGTTCAGGTCATTCCACACATCACCGA 65811
Query 301671 TGAAATCAAAAGAAGAATTCACATTGCGGCTGAAAAATCAGATATACTTATTGGAGAAAT 301730
|||||||||| || | || || ||| ||||| | |||| |||| |
Sbjct 65812 TGAAATCAAAGCGCATATCAAGCGTGGTGCCGAAGGCGCAGATGTGGCGATTGTAGAAGT 65871
Query 301731 TGGAGGAACGGTCGGAGATATCGAATCGCTTCCTTTTATAGAAGCGATTCGTCAA 301785
||| || || || || ||||||||||| || || || | ||||| |||||||||
Sbjct 65872 TGGCGGCACTGTGGGCGATATCGAATCTCTACCGTTCTTGGAAGCTATTCGTCAA 65926
>seq6889
Length=11136585
Score = 145 bits (160), Expect = 2e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | ||| || | |||||| || | || ||||| ||||||||||| ||||
Sbjct 1034008 ACCACCCCTCAGACGGACTACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGA 1034067
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||||| ||| || || || || ||||||||||| | | || |||||| ||
Sbjct 1034068 AAGAGTGCGGCAATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGG 1034127
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || ||||| || |||||||| || || ||| | ||||| ||||| | || ||
Sbjct 1034128 AATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCTAC 1034187
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| || |||| ||||| ||||| ||||||||
Sbjct 1034188 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1034235
Score = 138 bits (152), Expect = 2e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | ||| || || ||||| || | || || || ||||||||||| ||||
Sbjct 1034236 ACCACCCCTCAGACGGAGAACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGA 1034295
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||||||||| || || || || ||||||||||| | | || |||||| ||
Sbjct 1034296 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGG 1034355
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || ||||| || |||||||| || || || | ||||| ||||| | || ||
Sbjct 1034356 AATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCAC 1034415
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || ||||| ||||| || |||| || || ||||| || ||||||||
Sbjct 1034416 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATTTGCATTTT 1034466
Score = 131 bits (144), Expect = 4e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| | || ||||| ||||| || | || ||||| || |||||||| |||| |
Sbjct 1033781 CCACCCCTAAGACGAAGGACCAGGTGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAA 1033840
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||||||||| || || || || ||||||||||| | | || |||||| |||
Sbjct 1033841 AGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGA 1033900
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| || ||||| || |||||||| || || ||| | ||| | ||||| | || |
Sbjct 1033901 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGGTGGTGTCACTGGGCTCTTCC 1033960
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| | ||| || |||| ||||| ||||| ||||||||
Sbjct 1033961 TCCAGGGTGATGGCCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1034007
>seq3764
Length=1885950
Score = 140 bits (154), Expect = 7e-28
Identities = 166/225 (74%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || | | || ||||| | ||| || ||||| |||||||||||||
Sbjct 1780318 CCACCACGAAGTCTCAACACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 1780259
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| || || ||||| || ||||| || || ||||||||| | ||| |||||| |||
Sbjct 1780258 AAAGTACGTCCATCTTCCAGTTGCTTGCCAACAAAGATCAGTCTTTGCTGGTCAGGAGGA 1780199
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| || ||||| || |||||||| || ||||| | | || || ||||| | |||||
Sbjct 1780198 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTCCTATTGTATCCGAGGGCTCGACC 1780139
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGC 283097
|| |||||||| ||||| ||| ||| ||||| ||||| ||||||
Sbjct 1780138 TCAAGAGTGATGGTCTTCCCCCTCAGGGTCTTCACGAAAATCTGC 1780094
>seq504
Length=1076656
Score = 138 bits (152), Expect = 2e-27
Identities = 147/194 (76%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||| ||||||||||||| | || | ||||| || ||||| || || ||||||
Sbjct 268468 TCCTTTTGAATGTTGTAGTCAGACAAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAG 268409
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|||| | ||| |||||| ||||| || ||||| || |||||||| | |||||| |
Sbjct 268408 ATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGGCTTTACGTTT 268349
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| | || ||||| | ||||| || |||||||| ||||| || |||| ||||| |||
Sbjct 268348 TCTGTTGTATCCGAGGGCTCGACGTCAAGAGTGATGGTCTTCCCTGTCAGGGTCTTCACG 268289
Query 283089 AATATCTGCATTTT 283102
|| |||||||| ||
Sbjct 268288 AAAATCTGCATCTT 268275
>seq9216
Length=6899875
Score = 120 bits (132), Expect = 6e-22
Identities = 143/194 (74%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||| ||||||||||||| | || | ||||| || ||||| || || ||||||
Sbjct 1291513 TCCTTTTGAATGTTGTAGTCAGACAAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAG 1291454
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|||| | ||| |||||| |||| || ||||| || |||||||| || ||||| |
Sbjct 1291453 ATCAGTCTTTGGTGGTCAGGAAGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTT 1291394
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
| || || ||||| | | ||| || |||||||| ||||| | |||| ||||| | |
Sbjct 1291393 ACTATTGTATCCGAGGGCTTGACCTCAAGAGTGATGGTCTTCACTGTCAGGGTCTTCATG 1291334
Query 283089 AATATCTGCATTTT 283102
|| |||||||| ||
Sbjct 1291333 AAAATCTGCATCTT 1291320
>seq8560
Length=3069389
Score = 114 bits (126), Expect = 3e-20
Identities = 144/195 (74%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||| ||||||||||||| | || || ||||| || | ||| || || ||||||
Sbjct 2390265 TCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCACTTGCTTTCCAGCAAAG 2390206
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|||| | ||| | |||| ||||| || ||||| || |||||||| | ||||
Sbjct 2390205 ATCAGTCTTTGCT-GTCAGGAGGAATTCCTTCCTTATCCTGGATCTTGACCATTACATCT 2390147
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAA-AGTCTTAAC 283087
|| || || || || | ||||| | ||||||||| ||||| || ||||| |||||| ||
Sbjct 2390146 TCTATTGTATCAGAGGGCTCGACCTTGAGAGTGATGGTCTTCCCTGTCAAGAGTCTTCAC 2390087
Query 283088 GAATATCTGCATTTT 283102
|| |||||||| ||
Sbjct 2390086 AAAAATCTGCATCTT 2390072
>seq7743
Length=219709
Score = 113 bits (124), Expect = 9e-20
Identities = 98/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 301426 AAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAA 301485
||| | ||||||||| | ||||||||||| || || ||||||||||| || || || |||
Sbjct 150703 AAACTCGACCCCTATCTGAACGTCGATCCCGGCACCATGAGCCCGACACAGCACGGCGAA 150762
Query 301486 GTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTC 301545
|||||||||||||| || ||||| || || || || || || || |||||||| || ||
Sbjct 150763 GTGTTCGTGACGGACGACGGTGCCGAGACGGACCTCGACCTTGGCCACTACGAGCGCTTT 150822
Query 301546 AC 301547
||
Sbjct 150823 AC 150824
>seq11974
Length=740964
Score = 107 bits (118), Expect = 4e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||| ||||||||||||| | || | ||||| | ||||| || || ||||||
Sbjct 250254 TCCTTTTGAATGTTGTAGTCAGACAAAGTACATCCATCTTTCAGTTGCTTGCCAGCAAAG 250195
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|||| | ||| |||||| ||| || ||||| | |||| ||| | ||||| |
Sbjct 250194 ATCAGTCTTTGCTGGTCAGGAGGAGCTCCTTCCTTACCCTGGACCTTGACCTTTACATTT 250135
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || | ||| | | ||||| || ||||||| ||||| ||||||| ||||| |||
Sbjct 250134 TCTATGGGATCCAAGGGCTCGACCTCAGGAGTGATGGTCTTCCCCGTCAGGGTCTTCACG 250075
Query 283089 AATATCTGCATTTT 283102
|| |||||||| ||
Sbjct 250074 AAAATCTGCATCTT 250061
>seq10703
Length=79623
Score = 107 bits (118), Expect = 4e-18
Identities = 96/118 (81%), Gaps = 2/118 (2%)
Strand=Plus/Minus
Query 301430 TGGACCCCTATATCAACGTCGATCCGGGGACGATGA-GCCCGACTCAACATGGAGAAGTG 301488
||||||| || |||||||| || ||||| || ||| |||| | || || || ||||||
Sbjct 29016 TGGACCCGTACATCAACGTGGACCCGGGCACCATGTCGCCCTTC-CAGCACGGTGAAGTG 28958
Query 301489 TTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCA 301546
|||||||| || ||||| || || ||||||||||| ||||| |||||||| |||||||
Sbjct 28957 TTCGTGACCGACGATGGCGCAGAGACCGATCTGGACCTGGGCCACTACGAGCGTTTCA 28900
>seq7352
Length=278960
Score = 105 bits (116), Expect = 1e-17
Identities = 93/116 (80%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 301432 GACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGTTC 301491
|| |||||| | |||||||||||||| || ||||||||| ||| || || || || |||
Sbjct 60975 GATCCCTATCTGAACGTCGATCCGGGCACCATGAGCCCGTATCAGCACGGCGAGGTCTTC 60916
Query 301492 GTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCAC 301547
||||| || ||||| || || ||||| || ||||| || |||||||| || |||||
Sbjct 60915 GTGACCGACGATGGGGCCGAGACCGACCTCGATCTTGGTCACTACGAGCGCTTCAC 60860
>seq11633
Length=4562951
Score = 102 bits (112), Expect = 2e-16
Identities = 134/186 (72%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 282914 TTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAA 282973
|||||| ||||| || | | |||| ||||| ||| || ||| | || || || ||||
Sbjct 4176192 TTGGATATTGTATTCTGACGGAGTGCAGCCATTCTCCAGCTGTGTGCCTGCGAAAATCAG 4176133
Query 282974 ACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGAT 283033
| | ||||||||| ||| || |||||||||||| |||| || ||||| || | || |
Sbjct 4176132 ATGCTGTTGGTCAGGCGGGATGCCCTCCTTGTCTCGGATTTTGGCTTTGACATTCTCAGT 4176073
Query 283034 AGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATAT 283093
||||| | ||||| | || || || ||||| ||| ||| ||||| || || ||
Sbjct 4176072 GGTGTCACTGGGCTCGACCACAAGGGTAATGGTCTTGCCCATCAGGGTCTTCACAAAGAT 4176013
Query 283094 CTGCAT 283099
||||||
Sbjct 4176012 CTGCAT 4176007
>seq7823
Length=199163
Score = 98.7 bits (108), Expect = 2e-15
Identities = 98/127 (77%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 301421 TGCTTAAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATG 301480
||| ||| | || |||||| |||| |||||||||||||||||| ||| ||| || |
Sbjct 139089 TGCGTAAGCTCGATCCCTATCTCAATGTCGATCCGGGGACGATGTCGCCGTATCAGCACG 139030
Query 301481 GAGAAGTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAAC 301540
| || |||||||| || || || || || || |||||||| || || || |||||||| |
Sbjct 139029 GCGAGGTGTTCGTCACCGACGACGGGGCCGAGACCGATCTCGACCTTGGCCACTACGAGC 138970
Query 301541 GTTTCAC 301547
| |||||
Sbjct 138969 GCTTCAC 138963
>seq3353
Length=40798
Score = 98.7 bits (108), Expect = 2e-15
Identities = 97/123 (79%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 301426 AAAATGGACCCCTATATCAACGTCGATCCGGGGACGATG-AGCCCGACTCAACATGGAGA 301484
||| | ||||||||| |||||||||||||||| |||||| |||| | ||| ||||| ||
Sbjct 13845 AAATTCGACCCCTATCTCAACGTCGATCCGGGCACGATGTCGCCCTA-TCAGCATGGCGA 13787
Query 301485 AGTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTT 301544
||| | ||||| || || || || |||||||| || ||||| || || || ||||| ||
Sbjct 13786 AGTCTATGTGACCGACGACGGGGCGGAAACCGACCTCGATCTTGGCCATTATGAACGCTT 13727
Query 301545 CAC 301547
||
Sbjct 13726 TAC 13724
>seq330
Length=2318937
Score = 98.7 bits (108), Expect = 2e-15
Identities = 57/59 (97%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
|||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 169643 TTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 169585
>seq6169
Length=202695
Score = 96.9 bits (106), Expect = 7e-15
Identities = 104/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 301408 TTAAAGATAGCGATGCTTAAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGC 301467
||||| || | ||| | |||||||| || || || || |||||||| ||||| ||||||
Sbjct 157121 TTAAAAGTAACCATGGTCAAAATGGATCCATACATTAATGTCGATCCTGGGACTATGAGC 157180
Query 301468 CCGACTCAACATGGAGAAGTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTG 301527
|| || || || ||||| || || || || |||||||||||||| || | ||| ||
Sbjct 157181 CCATTCCAGCACGGTGAAGTATTTGTCACAGAAGATGGTGCTGAAACTGACTTAGATTTG 157240
Query 301528 GGGCACTACGAACGTTTC 301545
|| | ||||| ||||||
Sbjct 157241 GGTTATTACGAGCGTTTC 157258
>seq8424
Length=263062
Score = 93.3 bits (102), Expect = 9e-14
Identities = 96/123 (78%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 301426 AAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGA-GCCCGACTCAACATGGAGA 301484
||| | || ||||| |||| || || || || |||||| ||| || || ||||| ||
Sbjct 113923 AAACTCGATCCCTACCTCAATGTAGACCCCGGCACGATGTCGCCTTAC-CAGCATGGCGA 113981
Query 301485 AGTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTT 301544
|||||||||||| || ||||| || || |||||||| ||||| || || ||||| |||||
Sbjct 113982 AGTGTTCGTGACTGACGATGGCGCCGAGACCGATCTCGATCTCGGCCATTACGAGCGTTT 114041
Query 301545 CAC 301547
|||
Sbjct 114042 CAC 114044
>seq14001
Length=1541221
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 64684 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 64742
>seq6556
Length=284183
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 20875 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 20933
>seq4752
Length=355175
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 188988 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 189046
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 243360 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 243302
>seq4411
Length=2306675
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 366438 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 366380
>seq3570
Length=300636
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 298527 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 298469
>seq5233
Length=2008183
Score = 87.8 bits (96), Expect = 4e-12
Identities = 116/161 (72%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001
||||| || | ||| || || |||||||||| | ||| || || ||||| || |
Sbjct 1606586 CCATCTTCCAATTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCGGGAGGAATTCCTTTT 1606645
Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061
|| ||||||||||| || ||||| | || || | || || | || ||||||| |||||
Sbjct 1606646 TTATCTTGGATCTTGGCCTTTACATTTTCTATTGCATCTGAGGGTTTGACTTCGGGAGTG 1606705
Query 283062 ATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| | ||| | |||| ||||| | ||| |||||||| ||
Sbjct 1606706 ATGGACTTTCTTGTCAGGGTCTTCATGAAAATCTGCATCTT 1606746
>seq9118
Length=5926152
Score = 86.0 bits (94), Expect = 1e-11
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 282995 ACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTC 283054
|||||||||||||||||| || ||||| || | || |||||||| | ||||| ||
Sbjct 1417391 ACCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTC 1417332
Query 283055 GAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| ||||| ||||||| ||||| || || ||||||||
Sbjct 1417331 AAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1417287
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046537238540586
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |