Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq6 93.3 9e-14 seq2807 91.5 3e-13 seq11704 89.7 1e-12 seq11564 89.7 1e-12 >seq6 Length=1898892 Score = 93.3 bits (102), Expect = 9e-14 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 27255 CCCGGCTAGCTCAGTCGGTAGAGCCTGAGACTTTTAATCTCAGGGTCGTGGGTTCGAGCC 27196 Query 165771 CCACGATGGGC 165781 ||||| ||||| Sbjct 27195 CCACGTTGGGC 27185 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 17200 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 17141 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 17140 CCCCACGTTGGGC 17128 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| ||| |||||||||||| Sbjct 33066 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTTAGGGTTGTGGGTTCGAGC 33007 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 33006 CCCACGCTGGGC 32995 >seq2807 Length=229037 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 63994 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 63935 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 63934 CCCCACGTTGGGC 63922 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||| | Sbjct 53600 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGATC 53659 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 53660 CCCACGTTGGGC 53671 >seq11704 Length=747198 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 20886 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 20827 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 20826 CCCACGTTGGGC 20815 >seq11564 Length=833382 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 226499 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 226440 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 226439 CCCACGTTGGGC 226428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057665276483930