Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq11559 2015 0.0 seq4034 122 6e-23 seq13 86.0 4e-12 >seq11559 Length=838103 Score = 2015 bits (2234), Expect = 0.0 Identities = 1431/1643 (87%), Gaps = 34/1643 (2%) Strand=Plus/Plus Query 107140 TCTTAGGCAGGACTTGACTGAGGATATTTGTCTATAGAAGACATCTATCTTTACCATCAC 107199 || |||||||| |||||||||||||||||||||| |||||| | || | ||| ||||||| Sbjct 753655 TCCTAGGCAGGGCTTGACTGAGGATATTTGTCTAGAGAAGAAACCTCTTTTTGCCATCAC 753714 Query 107200 TCTGGAGTTGAACTTGATGTTC-TGGA-----------TTAGTTTGTAATTAAAGGCATT 107247 | |||||||||||||||||||| | || ||||||||||| | |||||||| Sbjct 753715 TTTGGAGTTGAACTTGATGTTCCTTGAGCATGTTTCAGTTAGTTTGTAACTGAAGGCATT 753774 Query 107248 TTGTTCTGTCCAAGGATCTCCTCCT---CCACCTTGCCTGTGCCCAAACTCTCCTGATCT 107304 ||||||||||||||||| || |||| || |||| ||||||||||||||| | ||||| Sbjct 753775 TTGTTCTGTCCAAGGATTTCATCCTTCTCCTCCTTCTCTGTGCCCAAACTCTACCGATCT 753834 Query 107305 CCCATCCCATGAAGATGGCTGGGTGGAAGAAGAAGCTTTGCCGGGGACATCATCTGTGGG 107364 ||||| ||||||||||| ||||||||||||||| || ||| |||| ||||| ||||||| Sbjct 753835 CCCATTCCATGAAGATGATTGGGTGGAAGAAGAAACTCTGCAGGGGGCATCACCTGTGGG 753894 Query 107365 CCCTGGGCTGCTATATGCTGCTGGCCGTTGTTTCTCTGAGACTTTCCCTCAGGTTTAAAT 107424 ||||| |||||||||||||||||||| ||||| ||||||||||||| |||||||| |||| Sbjct 753895 CCCTGTGCTGCTATATGCTGCTGGCCATTGTTGCTCTGAGACTTTCTCTCAGGTTAAAAT 753954 Query 107425 GTGATGTAGATTCCTTGGATCTGGAGTCCAGGGACTTCCAGAGTCAGCACTGTAGGGACA 107484 |||| |||||||| |||||||||| ||||||||||| | || |||| ||||||||||| Sbjct 753955 GTGACATAGATTCCCTGGATCTGGAATCCAGGGACTTTCGAAGCCAGCGCTGTAGGGACA 754014 Query 107485 TGTTGTACAATAGCCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTCTGGGATCACGC 107544 | |||||||| |||||||||||||||||||||||||||||||||||||||| |||| | Sbjct 754015 TCTTGTACAAGTCCCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTCTGGGGTCACCC 754074 Query 107545 GAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGACAACCTGGAAGTGAAGAAAAAGC 107604 ||||||||||||||||||| ||| |||| |||| ||||| ||||| | ||||| |||| Sbjct 754075 GAGGGGACCAGGAAGCAGTAGTCAAGGCTGTCCTGGACAATCTGGAGATCAAGAAGAAGC 754134 Query 107605 GGTCGCCTCTCACTGGCACCTATTACCTCAACATAACCAGAGACTGTGAGCGCTTCAAGG 107664 || |||| |||| | |||| ||||||||||||| |||||||| ||||||| || ||| Sbjct 754135 GGGAGCCTTTCACAGACACCGATTACCTCAACATGACCAGAGATTGTGAGCAGTTTAAGT 754194 Query 107665 CCCAAAGGAAGTTCATACAGTTCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCT 107724 ||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||| || | Sbjct 754195 CCCAAAGGAAGTTCATACATTTCCCACTGAGCAAAGAAGAGTTAGACTTCCCCATCGCAT 754254 Query 107725 ACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATG 107784 |||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 754255 ACTCTGTGGTCGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCTGTGTATG 754314 Query 107785 CCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGG 107844 ||||||||||||||||||| ||||| ||||||| |||||||||||| ||||||||||||| Sbjct 754315 CCCCTCAGAACATATACTGCGTCCATGTGGATGAGAAGTCCCCAGAAACTTTCAAAGAGG 754374 Query 107845 CGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGG 107904 | |||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct 754375 CAGTCAAGGCCATTATTTCCTGCTTCCCAAATGTCTTCATGGCCAGTAAGTTGGTCCGGG 754434 Query 107905 TGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCC 107964 ||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct 754435 TGGTTTACGCCTCCTGGTCCAGGGTGCAGGCTGACCTGAACTGTATGGAAGACTTGCTCC 754494 Query 107965 AGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGA 108024 ||||||| ||||||||||| ||||||||||||||||| |||||||| || || ||||||| Sbjct 754495 AGAGCTCCGTGCCATGGAAATACTTACTGAATACATGTGGGACAGATTTTCCTATAAAGA 754554 Query 108025 CCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTG 108084 ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| | Sbjct 754555 CCAATGCTGAGATGGTCCTGGCCCTCAAGATGTTGAATGGGAAGAACAGTATGGAGTCCG 754614 Query 108085 AGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGTGACAGACACAC 108144 || ||||| |||||| |||||| |||||||||||||| ||||||||||||||||||| Sbjct 754615 AGTTACCTACTGAGTACAAAAAGTCTCGCTGGAAATACCACTATGAGGTGACAGACACAT 754674 Query 108145 TGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGA 108204 || ||| |||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 754675 TGCACCTAACCAGCAAGATGAAGGACCCTCCCCCTGATAACTTACCTGTGTTCACAGGGA 754734 Query 108205 ATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCC 108264 |||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||| Sbjct 754735 ATGCCTATTTTGTGGCTTCTCGAGCCTTTGTCCAACATGTCTTAGAGAACCCCAAATCCC 754794 Query 108265 AAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCC 108324 || ||||| | ||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct 754795 AACGACTGATCGAATGGGCAAAAGACACCTATAGCCCCGATGAACACCTCTGGGCCACCC 754854 Query 108325 TTCAGCGTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAG 108384 |||||||||| |||||||||||||||||||| || |||| |||||| ||||||||||| Sbjct 754855 TTCAGCGTGCACCGTGGATGCCTGGCTCTGTCCCCTACCACTCCAAGTTTCACATCTCAG 754914 Query 108385 ACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGG 108444 ||||||| ||||| |||||||| ||||| |||||| ||| ||||||||| |||| |||| Sbjct 754915 ACATGACCGCCATTGCCAGGCTAGTCAAATGGCAGATCCATGAGGGAGATATCAGTATGG 754974 Query 108445 GGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCG 108504 | || ||||||||||| |||||||||||||| | | |||| ||||||||||| ||||| | Sbjct 754975 GAGCACCTTATGCACCTTGCTCTGGAATCCACCAGCGGGCTATCTGCATTTATGGGGCTG 755034 Query 108505 GGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGG 108564 |||||||| |||||||||| ||||| |||||||||||||| |||||||||||||| | || Sbjct 755035 GGGACCTGCACTGGATTCTTCAGAATCATCACCTCTTGGCGAACAAGTTTGACCCAAAGG 755094 Query 108565 TGGATGATAACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGCCATCTATGGGA 108624 |||||||||| || |||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 755095 TGGATGATAATGTTCTGCAGTGCTTAGAAGAGTATTTACGTTATAAGGCCATCTATGGGA 755154 Query 108625 CTGAACTTTGAGCTGCACTGT------------------GGGCCAGGGAC-TGTGCCAAC 108665 ||||||| |||| | ||| || ||| |||| || ||| | ||| Sbjct 755155 CTGAACTCTGAGATACACCGTGAGAGGATTGCTACCCGAGGGGCAGGAACATGTACAAAC 755214 Query 108666 ATGCCCAGGGCGTACTGGTACTGTGTGGGGTGGGGGACGAGGGCTGTGGAATCCATGGCA 108725 ||||||| | |||| || |||||||||||| ||| |||||| |||||||||||||| Sbjct 755215 GTGCCCAGAAAATGCTGGGACAGTGTGGGGTGGGAGACCAGGGCTCTGGAATCCATGGCA 755274 Query 108726 TCCCCCAGGGTCAGAGGGCTGCT 108748 |||||| ||||||| |||||||| Sbjct 755275 TCCCCCTGGGTCAGGGGGCTGCT 755297 >seq4034 Length=161105 Score = 122 bits (134), Expect = 6e-23 Identities = 571/891 (64%), Gaps = 33/891 (4%) Strand=Plus/Plus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 || || |||||||||||| ||| || || || || || || | ||||| ||| | || Sbjct 93165 CCCCTTAGTAAAGAAGAGGCAGAGTTTCCAATAGCATATTCTGTAGTGGTTCATCACAAA 93224 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 ||||||| |||| |||| ||| | ||| | ||| |||||||| | || || | Sbjct 93225 ATTGAAATGCTTGACAGGCTCCTGAGGGCCATTTATATGCCTCAGAATTTCTATTGCATT 93284 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 ||||||||| || || || | || | || || | | |||| ||||| Sbjct 93285 CACGTGGATACAAAATCAGAGGAATCCTTTTTGGCCGCAGTGATTGGCATTGCGTCCTGT 93344 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 ||| |||||||| |||||||| || ||| || || ||||| || ||| | | Sbjct 93345 TTCAGTAATGTCTTTGTGGCCAGTCAGCTGGAGAGTGTTGTGTATGCATCTTGGAGCCGG 93404 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCA--TGGAAGT 107985 || || |||||||| ||||| ||| | ||| | || | || | | ||| ||||||| Sbjct 93405 GTTCAGGCTGACCTCAACTGCATGCAGGACCT-CTACCGAA-TGAATGCAGACTGGAAGT 93462 Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGG 108045 |||| | ||| ||||| | || || || || || ||||| || || ||| | Sbjct 93463 ACTTGATAAATCTCTGCGGTATGGATTTTCCTATTAAAACCAACCTGGAAATTGTCAGGA 93522 Query 108046 CCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTA---CCTTCTGAGTCCa 108102 |||||| |||| | ||| |||||| | || | ||| | || || | | Sbjct 93523 AGCTCAAGTTGTTAATGGGCGAGAACAACCTAGAAACGGAGAGAATGCCATCCAAT---A 93579 Query 108103 aaaaaaaTCGCTGGAAATACCGCTATG-AG--GTGACAGACACACTGT--ACCCT----A 108153 ||||| | | |||||| | | |||| || |||| | | ||| | | | | Sbjct 93580 AAAAAGAAAGGTGGAAAAAGCATTATGCAGTCGTGAATGGAAAGCTGACAAACATGGGGA 93639 Query 108154 CCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATT 108213 || ||| || | ||||| | ||| | ||| |||| |||| | |||||||| Sbjct 93640 CCGACAAAATACAT---CCTCCTCTTGAAAC---ACCTCTGTTTTCAGGCAGTGCCTATT 93693 Query 108214 TTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGG 108273 |||||| | | | | ||| | |||| | || || ||| |||| | Sbjct 93694 TTGTGGTCAGTAGGAGGTATGTGGAGTATGTGCTCGAGAATGAAAAAATACAAAAGTTTA 93753 Query 108274 TTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTG 108333 | || |||| |||||||| || ||||| ||||| | ||||||||||| ||||| | | Sbjct 93754 TGGAGTGGGCAAAAGACACATACAGCCCGGACGAGTATCTCTGGGCCACTATTCAGAG-G 93812 Query 108334 CTCCGTGGA-TGCCTGGCTCTGT-TCCT--AGCCACCCCAAGTATCACATCTCAGACATG 108389 ||| | | | || || || | |||| ||||| ||||| |||| || |||||| Sbjct 93813 ATCCCCGAAGTCCCAGGGTCACTGTCCTTAAGCCA---TAAGTACGACATGTCCGACATG 93869 Query 108390 ACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCG 108449 || || |||||| | ||||||||||||||| || || || | || ||| || Sbjct 93870 CACGCGATTGCCAGGTTTGTCAAGTGGCAGTACTTTGAAGGTGACATTTCCAAGGGCGCC 93929 Query 108450 CCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGAC 108509 || || | || ||| || |||| | | || | ||| ||| ||| ||||| ||| Sbjct 93930 CCCTACCCGCCGTGCAGCGGCGTCCACGTGCGCTCCGTGTGCGTTTTCGGAGCCGGTGAC 93989 Query 108510 CTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCG 108560 || ||||||| | || || ||| | || || |||||||| ||| || Sbjct 93990 TTGAACTGGATGTTGCACGTGCACCACTTGTTCGCCAACAAGTTCGACACG 94040 >seq13 Length=734230 Score = 86.0 bits (94), Expect = 4e-12 Identities = 233/344 (68%), Gaps = 22/344 (6%) Strand=Plus/Minus Query 107696 TAAAGAAGA-GCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAA 107754 ||||||||| ||| || || || | || || ||||| ||||| | || | || | Sbjct 224623 TAAAGAAGAAGCT-GAATTTCCTTTGGCGTATATCATGGTCATCCATCACAATTTCGACA 224565 Query 107755 ACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGG 107814 ||||| | |||| | ||||| | || |||||||| || |||||||| ||||||| Sbjct 224564 CCTTTGTAAGGCTCTTCAGAGCCATTTACATGCCTCAGAATATCTACTGTGTTCACGTGG 224505 Query 107815 ATGTGAAGTCCCCAGA-GACTTTCAAAGAGGCGGTCAAGGCCATTATTTC-CTGCTTCCC 107872 ||| ||| | ||| || ||| ||||| || || || | |||| | ||||||||| Sbjct 224504 ATGAGAAAGCGACAGTTGAATTT-AAAGATGCAGTGGAG-CAATTACTGAGCTGCTTCCC 224447 Query 107873 CAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGG----TCCAGAG 107928 |||| || |||| ||| ||| || ||||| || | ||| ||||| Sbjct 224446 AAATGCTTTTCTGGCTTCCAAGATGGAACCCGTGGTCTACGG----TGGGATTTCCAGGC 224391 Query 107929 TGCAAGCTGACCTGAACTGTATGGAAGA-CTTGCTCCAGAGCTC---AGTGCCATGGAAG 107984 | || |||||||||||||| || |||| |||| ||| |||| || || |||||| Sbjct 224390 TCCAGGCTGACCTGAACTGCATCAAAGATCTTG---CAG-GCTCTGAGGTTCCGTGGAAG 224335 Query 107985 TACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAA 108028 ||| | || || || ||| ||| |||||| | || ||||| Sbjct 224334 TACGCCATCAACACCTGTGGGCAAGATTTCCCCCTGAAAACCAA 224291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348219092356014