Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq7436 118 8e-22 >seq7436 Length=43218 Score = 118 bits (130), Expect = 8e-22 Identities = 325/496 (66%), Gaps = 9/496 (2%) Strand=Plus/Minus Query 20286 AAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAACGAA 20345 || ||||| || ||||||||||| ||| | ||||| | ||| | ||| ||||| || Sbjct 39842 AATTTATTCAGGTCAAGGAGTAGACCAACTGCAAAAGCTGATTGACACAATCAAAACCAA 39783 Query 20346 CCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGC 20405 ||| | ||||||||||| ||| |||| || ||||| | |||||| | ||| | || | Sbjct 39782 CCCTGAAGACAGAAGAATCATTCTATGTGCTTGGAA-TCGAAAGATCTTCCTCTCATACC 39724 Query 20406 TT-------TGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGT 20458 | |||| | || ||| || ||||| || ||||| | | || | ||| Sbjct 39723 CTGCCACCCTGCCCCTGTGCCATGCCCTTTGCCACTTCTACGTGGTGAGCCATCAGCTGT 39664 Query 20459 CGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAA 20518 | || || |||| || | || | || | ||| ||||| || | | ||| | || | Sbjct 39663 CCTG-CAGCTGTACCAGAGGTCAGGAGACAGGGGCCTGGGCGTGTCCTGCAACCTCGCCA 39605 Query 20519 GTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTAG 20578 | ||||| ||||| || || |||| | ||| | |||| | || | ||||||| | Sbjct 39604 GCTATGCCCTGCTCACCTACATGACCGAACACATCACAGGCCTGAAGCCAGGTGACTCTG 39545 Query 20579 TCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACAGT 20638 | ||||| | |||| || || |||||||| |||| || || | | ||| | ||| Sbjct 39544 TACACACTTTGCGAGATGCACACATTTACCTGGATCACATTGAGCTGCTGAAAATGCAGC 39485 Query 20639 TAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAAAGATATTA 20698 | || || ||| | ||||||| || || | ||| ||| | | || Sbjct 39484 TTCAGGGAGAATCAAGGCCTTTCCCAAAGCTCAAAATCCTTGGAAAAGTTGAGAAAATCG 39425 Query 20699 ACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAATTCAATTCCAA 20758 |||| || || ||||| || ||| | | ||||| || | ||||||| | ||| || Sbjct 39424 ACGACTTCAAGGCTGAAGACTTTCAGATTGAAGGCTACAGTCCCCATCCCACTATTAAAA 39365 Query 20759 TGGAAATGTCTGTTTA 20774 |||||||| ||||||| Sbjct 39364 TGGAAATGGCTGTTTA 39349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399127025340895