Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq11472 315 9e-81 seq2631 282 6e-71 seq11411 179 5e-40 seq2642 140 4e-28 seq11501 132 6e-26 seq6223 102 1e-16 seq1959 102 1e-16 seq541 100 4e-16 seq3798 87.8 2e-12 >seq11472 Length=944226 Score = 315 bits (348), Expect = 9e-81 Identities = 605/889 (68%), Gaps = 5/889 (1%) Strand=Plus/Plus Query 35852 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCT 35911 ||| | |||||||| | || || || || || | || || | || ||||| || ||| Sbjct 784050 GACGTCACTCCCATCCTCTGATACTCGCCTACTCTCTTCTCAGAGAAGTTAGTCTTCCCT 784109 Query 35912 TCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAAT 35971 || | ||| ||||| ||||| || || | |||||| || | ||| || || Sbjct 784110 TCCAGTGAAATATTCTCCATAAAGTCAAGTGGATTTTCTACTCTGAAAACCTTGCCAACA 784169 Query 35972 CCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAA 36031 |||| | || | ||| ||||| || ||||| || || ||||||| | || Sbjct 784170 CCCAGCCCCAGCATAAGTCTGTCTGCCACGAATTCGATGTACTGCTTCATCAGAGCGCAG 784229 Query 36032 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACC 36091 ||||| || || | || ||||| | ||| | || || | || ||||| || ||| Sbjct 784230 TTCATCCCAATGGGCTTCACTGGCGGGGCCTCCGTGAGGAGCTCCTGTTCTATCCTAACC 784289 Query 36092 GCGTCTGTT-ATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAA 36150 || ||| || || | | ||| | | || ||| | | | |||| || Sbjct 784290 GCA-CTGACGATTATTCCTTTGACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTCGAA 784348 Query 36151 CATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAA 36210 ||||| || || || || ||||||| |||||||||||| ||||| | |||||||||||| Sbjct 784349 CATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCGTTGGAAAA 784408 Query 36211 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGA 36270 ||||| |||||||| || || || ||||| ||||| || || || ||||| || ||||| Sbjct 784409 TGTGAGGCCGGGCATCAGTCCTCGTTTTTTGAGCCAGAACATCGATGCAAAAGAACCAGA 784468 Query 36271 AAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACT 36327 | |||| |||||||| ||||| |||||||| | | ||||| || | | | | Sbjct 784469 AGAGAAGATTCCTTCCACTGCGGCAAAGGCTGCGACACGTTCTCCGTACGTAGCCTCTTT 784528 Query 36328 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 36387 ||| |||| |||||||| |||||||| |||||||||||||||||||| || Sbjct 784529 GTCCCCGATCCGGCGCACGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCGAT 784588 Query 36388 AGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACT 36447 ||||| |||||| | | |||| | |||||||| | || |||| | ||||| Sbjct 784589 GGCATTGAAGAGAAATTCCCTTTCTCTGGAATCTTTAATGTGAGTGTCAACGAGGAGACT 784648 Query 36448 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTC 36507 |||||||| ||||| ||||||| | ||| ||||| || ||||||||||| | || || Sbjct 784649 CTACATTTCAGAATGTGTGTTTTCCACGGCAATTTGGAAGCCGTAGAAACAACGGGCTTC 784708 Query 36508 GGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACT 36567 |||||||| |||||| | ||| || || | || |||||||| ||||| || ||||| Sbjct 784709 TGTAATCTGAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTTACTATGCCATCACT 784768 Query 36568 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATT 36627 || ||| | || |||| ||||| | |||||| | || | || | || | Sbjct 784769 TGCCGCAGAGAAAGCCAGAACATGCGAAGTGAAATATCTCTCCTCAGGCTTCAGGGCTTC 784828 Query 36628 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 36687 || | | || || || || | ||||| || || |||||||||| || ||||| || Sbjct 784829 CCGGTGCTGAATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAAGGAAGCCTCAGC 784888 Query 36688 CTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 36736 || || ||| | | ||| || ||| | |||| || ||||| || ||| Sbjct 784889 TTTCTTCTACGTCTGCCAAATATCACGGTATTCGATAGGAAAGATGACA 784937 >seq2631 Length=239737 Score = 282 bits (312), Expect = 6e-71 Identities = 597/888 (67%), Gaps = 7/888 (1%) Strand=Plus/Minus Query 35852 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCT 35911 ||| | || ||||| | || || || || || | || || | || ||||| || ||| Sbjct 171526 GACGTCACGCCCATCCTCTGATACTCGCCTACTCTCTTCTCAGAGAAGTTAGTCTTCCCT 171467 Query 35912 TCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAAT 35971 || | ||| ||||| ||||| || || | |||||| || | ||| || || Sbjct 171466 TCCAGTGAAATATTCTCCATAAAGTCAAGTGGATTTTCTACTCTGAAAACCTTGCCAACA 171407 Query 35972 CCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAA 36031 |||| || || | ||| ||||| || ||||| || || ||||||| | || Sbjct 171406 CCCAGCTCCAGCATAAGTCTGTCTGCCACGAATTCGATGTACTGCTTCATCAGAGCGCAG 171347 Query 36032 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACC 36091 ||||| || || | || ||||| | ||| | || || | || ||||| || ||| Sbjct 171346 TTCATCCCAATGGGCTTCACTGGCGGGGCCTCCGTGAGGAGCTCCTGTTCTATGCTAACC 171287 Query 36092 GCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAAC 36151 |||| || || | | ||| | | || ||| | | | |||| ||| Sbjct 171286 GCGTTGACGATTATTCCTTTGACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTCGAAC 171227 Query 36152 ATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAAC 36211 ||| || || || || ||||||| |||||||||||| ||||| | ||| |||||||| Sbjct 171226 ATCGGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAAAT 171167 Query 36212 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAA 36271 ||||| |||||||| || || || ||||| ||||| || || || ||||| || |||||| Sbjct 171166 GTGAGGCCGGGCATCAGTCCTCGTTTTTTGAGCCAGAACATCGATGCAAAAGAACCAGAA 171107 Query 36272 AAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTG 36328 |||| |||||||| ||||| |||||||| | | ||||| || | | | || Sbjct 171106 GAGAAGATTCCTTCCACTGCGGCAAAGGCTGCGACACGTTCTCCGTACGTAGCCTCTTTG 171047 Query 36329 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA 36388 || |||| |||||||| | ||||||| ||||| ||||||||||| || Sbjct 171046 TCCCCGATCCGGCGCACGGCCCAATCTGGCTTCTTT---ACACA-GGCATTGTCTCGATG 170991 Query 36389 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA 36448 |||| |||||| | | |||| | |||||||| | || |||| | ||||| Sbjct 170990 ACATTGAAGAGAAATTCCCTTTCTCTGGAATCTTTAATGTGAGTGTCAACGAGGAGACTC 170931 Query 36449 TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCG 36508 |||||||| ||||| ||||||| | ||| ||||| || ||||||||||| | || || Sbjct 170930 TACATTTCAGAATGTGTGTTTTCCACGGCAATTTGGAAGCCGTAGAAACAACGGGCTTCT 170871 Query 36509 GTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG 36568 |||||||| |||||| | || || || | || |||||||| ||||| || ||||| Sbjct 170870 GTAATCTGAACTTCTTGGCTAAGCCGCTCCACCAAGTTTTCATTTACTATGCCATCACTT 170811 Query 36569 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTC 36628 |||||| | || |||| |||||| | |||||| | | | || | || | | Sbjct 170810 GCTGCAGAGAAAGCCAGAACATGTGAAGTGAAATATCTCTTCTCAGGCTTCAGGGCTTCC 170751 Query 36629 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 36688 | | | || || || || | ||||| || || ||||||| || || ||||| || Sbjct 170750 CGGTGCTGAATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAGAAGGAAGCCTCAGCT 170691 Query 36689 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 36736 || |||||| | | ||| || ||| | |||| || ||||| || ||| Sbjct 170690 TTCTTATACGTCTGCCAAATATCACGGTATTCGATAGGAAAGATGACA 170643 >seq11411 Length=1027607 Score = 179 bits (198), Expect = 5e-40 Identities = 161/202 (80%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 9231 TTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATCCAAG 9290 || |||||| | ||||||||| | | ||||| |||||||| |||||||||||||||||| Sbjct 916240 TTTTTATTAACTGCTTCCAAAACCCGCAACAGGTGCAAGAATAGATTGATGATATCCAAG 916299 Query 9291 TAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGAGTGC 9350 |||| |||| | ||||| ||||| |||||||| || ||| |||| || | ||||| Sbjct 916300 TAGAGGCTGATGGCAGCTAATACATACTCTTCAGGTGACAGCCTATGCATCAAGGAGTGT 916359 Query 9351 GTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAGCTCC 9410 ||||||||||| |||||||| ||||| | |||||| || | ||||| || ||||| |||| Sbjct 916360 GTGTCATAGATGATGAATCCACAGAAAAGAAGGGCTCCTACAGCAGCCAAGACCAACTCC 916419 Query 9411 ACTGTTTCACTTTGCACAAATA 9432 | ||| ||||| | | ||||| Sbjct 916420 ATTGTCTCACTGTAAAAAAATA 916441 Score = 147 bits (162), Expect = 3e-30 Identities = 104/119 (87%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539 |||||||||| ||| |||||||||||||| |||||||||||| || |||||| | ||||| Sbjct 921239 CCTGCTCCAAATTTGCTGAAATCTCTCTTAGATTGTAGAGTACATACAGTCAAACCAAGA 921298 Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598 || |||||||||||||| || |||||||||| ||| | || ||| |||||||||||||| Sbjct 921299 AATACTGCAGTAGTCAGTATAAAAGCTTGCAGAACAATATACACGTCATAGAAAGTAAC 921357 Score = 100 bits (110), Expect = 4e-16 Identities = 70/80 (88%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 ||||||| |||||||| |||| || ||||| ||||||||||||||||||||||||||| Sbjct 935088 CCATTCGGATGTGCACGTTGGCGGAGGCCACGCAGCTGCCATAGTTGAAGTCGTCCTCGA 935147 Query 9907 TGGAGGAGCACGCGTAGAGG 9926 |||||||||| | |||| || Sbjct 935148 TGGAGGAGCAGGGGTAGCGG 935167 Score = 84.2 bits (92), Expect = 3e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 9754 TCCGCATGCAGTCAAAGTATAAAAATACTGCAGTTGTTGCCGTTGTTAAAAGAAATTGTA 9813 |||| || | |||||||||||||| | | | |||||| || ||||| |||| ||| | Sbjct 926712 TCCGTATAGAATCAAAGTATAAAAAAAACGTGGATGTTGCTGTAGTTAAGAGAACTTGCA 926771 Query 9814 GACAAAGGATACCGTAGACTTTTCTTAGAAATGC 9847 || ||||||| | |||||||||||||||||| || Sbjct 926772 GAGAAAGGATGCTGTAGACTTTTCTTAGAAAGGC 926805 >seq2642 Length=239306 Score = 140 bits (154), Expect = 4e-28 Identities = 113/137 (82%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 || ||||||||||| ||||| ||||| |||||||| || ||||||||||| ||||| | Sbjct 104176 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTACTGGTATAAGGTTCAATT 104117 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 ||||||||||||||||| || ||||||||||| ||||| ||||| || || | | |||| Sbjct 104116 GACTCATTATTTCCCAATATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATGAGTAAA 104057 Query 65301 CTATTTCTAAGACCGTA 65317 || ||||| | ||| || Sbjct 104056 CTGTTTCTTATACCATA 104040 Score = 102 bits (112), Expect = 1e-16 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 |||| |||| ||| |||||||||||||| | || || ||||| || || || || | | Sbjct 83164 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCAATCCTTGCTGCCAGGA 83105 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 83104 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTCGCAGCTGTTTCAGCAGCCAAAGTATCTA 83045 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 ||| || || || || ||| | |||| |||||||| || ||||| Sbjct 83044 GTTCCACAGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCAT 82999 Score = 100 bits (110), Expect = 4e-16 Identities = 129/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 65419 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 65478 |||| || || ||||| || | || || || |||||||| || || || || || || | Sbjct 99831 CATAGGTTTCATATGGGCCATACTCCTTGGCCAGTTCACAGCTGGCTTCCAAGGCTCCAT 99772 Query 65479 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 65538 ||||||||||||| ||||||| |||||| | || || ||| | || ||||| || | Sbjct 99771 AATAAATGGTTTCAAAGATCTGCTTATTCAATAGCTGGGCCTCCGGACTCTCAAAAGGGT 99712 Query 65539 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATG 65596 | | | |||||||| || ||||| | ||||| || ||||| || || || | ||| Sbjct 99711 ACCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATG 99654 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115 || |||||||||||| |||||||| ||||||||||| || | || | || |||| | Sbjct 95486 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 95427 Query 66116 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCA 66175 || || || |||||||| || || || | ||| |||||| | | || || ||||||| Sbjct 95426 CTGCTCTTCCTTTCCTGTGTTTTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCA 95367 Query 66176 CGGTTCCAAGTATATGGC 66193 || |||| ||| || || Sbjct 95366 AGGCTCCAGGTAAATAGC 95349 >seq11501 Length=2026878 Score = 132 bits (146), Expect = 6e-26 Identities = 102/121 (84%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||||||||| ||||| | ||| |||||||| ||||| |||||||| || || || |||| Sbjct 1246983 CCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTT 1247042 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 | ||||| ||||| || ||||| || ||||||||||| |||||||| ||||| ||||||| Sbjct 1247043 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCGGCAAAGG 1247102 Query 36300 C 36300 | Sbjct 1247103 C 1247103 Score = 102 bits (112), Expect = 1e-16 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 36418 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 36477 |||||||| || || ||||| | |||||||||||||| ||||| |||||||| ||||| Sbjct 1248981 ATCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 1249040 Query 36478 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCT 36523 ||||| || || |||||||| | || || |||||||| |||||| Sbjct 1249041 AATTTGGAAGCCATAGAAACAACGGGCTTCCGTAATCTGAACTTCT 1249086 >seq6223 Length=75078 Score = 102 bits (112), Expect = 1e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 36182 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 36241 || ||||| || || | ||| |||||||| || ||||| ||||| || || | || || Sbjct 21900 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGTCCTCTTTTCTTT 21841 Query 36242 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300 ||||| ||||| | ||||| ||||| || ||||||||||||||||| || |||||||| Sbjct 21840 AGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 21782 Score = 84.2 bits (92), Expect = 3e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 36542 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 36601 |||||||||||||| ||||||||||||||||||||||| || || | || |||||| Sbjct 17271 AAATTTTCATTCACAATTCCGTCACTGGCTGCAAAAAAGGCTAAGATGTGAGAGATAAAA 17212 Query 36602 TATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCAC 36657 || || || | || | | || || ||||| | | || ||| || |||| ||| || Sbjct 17211 TACTTCTCTTCTGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTGATAAATCAAC 17156 >seq1959 Length=300652 Score = 102 bits (112), Expect = 1e-16 Identities = 147/207 (71%), Gaps = 3/207 (1%) Strand=Plus/Plus Query 33948 TTGTACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 34007 ||| ||||| | | |||||| ||| |||| |||| | | || ||||| || |||| ||| Sbjct 37257 TTGAACTTCCTCTACTTCTGGGTAAAATATCCGTTCACAAATGAGCTGTGCAATTCGATC 37316 Query 34008 CCCCGTATTTACATTGAATGTACATTTTCCATTATTAATAAGAATGACTCCTATATTTCC 34067 ||||| || || | ||| | ||| ||| ||||| || | || || | |||||| Sbjct 37317 ACCCGTTTTGACTTCGAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCC 37376 Query 34068 CCTATAATCTTCGTCTATTACACCGCCTCCTATATCAAT---ACCTTTTAGGGACAGACC 34124 ||||||||||| ||||| ||||| |||||| ||| || |||| | || || Sbjct 37377 TCTATAATCTTCATCTATGACACCAGCTCCTACATCTATGAAGTGTTTTGCAGCCAAGCC 37436 Query 34125 AGACCTAGGAGCTATTCTACCATAGCA 34151 ||| | ||||||| ||| |||||||| Sbjct 37437 AGAACGTGGAGCTACTCTCCCATAGCA 37463 >seq541 Length=1676364 Score = 100 bits (110), Expect = 4e-16 Identities = 152/216 (70%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 33939 ATCTAGAGATTGTACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGC 33998 ||||| | ||| ||||| | | |||||| ||| |||| |||| | | || ||||| || Sbjct 788239 ATCTAAAACTTGAACTTCCTCTATTTCTGGGTAAAATATCCGTTCACAAATGAGCTGTGC 788298 Query 33999 TATTCTATCCCCCGTATTTACATTGAATGTACATTTTCCATTATTAATAAGAATGACTCC 34058 |||| ||| ||| | || || | ||| | ||| ||| ||||| || | ||| || Sbjct 788299 AATTCGATCACCCTTTTTGACTTCGAACTTTTCTTTGCCAAAATTAAACAGTACGACACC 788358 Query 34059 TATATTTCCCCTATAATCTTCGTCTATTACACCGCCTCCTATATCAAT---ACCTTTTAG 34115 | | |||| ||||||||||| ||||| ||||| |||||| ||| || |||| Sbjct 788359 AACACTTCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCTATGAAGTGTTTTGC 788418 Query 34116 GGACAGACCAGACCTAGGAGCTATTCTACCATAGCA 34151 | || ||||| | ||||||| ||| |||||||| Sbjct 788419 AGCCAAGCCAGAACGTGGAGCTACTCTCCCATAGCA 788454 >seq3798 Length=177548 Score = 87.8 bits (96), Expect = 2e-12 Identities = 175/257 (68%), Gaps = 7/257 (3%) Strand=Plus/Minus Query 33900 TCCGGTTGATCCAAACCCT--TGATCTCCTCTATCTGTACTATCTAGAGATTGTACTTCT 33957 ||| || || ||||| ||| ||| | ||| | ||| ||||| | ||| ||||| Sbjct 167509 TCCAGTGGAACCAAAACCTCCTGAACCCCTTTCAGTGTC--ATCTAAAACTTGAACTTCC 167452 Query 33958 TTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCCCCCGTATTT 34017 | | |||||| ||| |||| ||| | | || ||||| || ||| ||| ||| | || Sbjct 167451 TCTATTTCTGGGTAAAATATCTGTTCACAAATGAGCTGGGCAATTTGATCACCCTTTTTG 167392 Query 34018 ACATTGAATGTACATTTTCCATTATTAATAAGAATGACTCCTATATTTCCCCTATAATCT 34077 || | || | ||| ||| ||||| || | || || | |||||| ||||||||| Sbjct 167391 ACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTCTATAATCT 167332 Query 34078 TCGTCTATTACACCGCCTCCTATATCAAT---ACCTTTTAGGGACAGACCAGACCTAGGA 34134 || ||||| ||||| |||||| ||| || |||| | || ||||||| ||| Sbjct 167331 TCATCTATGACACCAGCTCCTACATCTATGAAGGGTTTTGCAGCCAAGCCAGACCGTGGA 167272 Query 34135 GCTATTCTACCATAGCA 34151 |||| | | |||||||| Sbjct 167271 GCTACTGTCCCATAGCA 167255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658076451729240