Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq11472 104 2e-17 seq2631 96.9 2e-15 >seq11472 Length=944226 Score = 104 bits (114), Expect = 2e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| || || ||||| || | | |||||| || ||||| | || |||||||| Sbjct 784498 GCCTTTGCCGCAGTGGAAGGAATCTTCTCTTCTGGTTCTTTTGCATCGATGTTCTGGCTC 784439 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 || ||||| || ||||| || | | ||||||||||| | |||||| | ||||| Sbjct 784438 AAAAAACGAGGACTGATGCCCGGCCTCACATTTTCCAACGAACTTATTAGCAGAGACGAG 784379 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTT 22901 ||| |||||||||||||||| || || |||| Sbjct 784378 GGTTTACACTGTGACTTTGCCTGCCTGATGTT 784347 >seq2631 Length=239737 Score = 96.9 bits (106), Expect = 2e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| || || ||||| || | | |||||| || ||||| | || |||||||| Sbjct 171078 GCCTTTGCCGCAGTGGAAGGAATCTTCTCTTCTGGTTCTTTTGCATCGATGTTCTGGCTC 171137 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 || ||||| || ||||| || | | |||||||| || | |||||| | ||||| Sbjct 171138 AAAAAACGAGGACTGATGCCCGGCCTCACATTTTCCAATGAACTTATTAGCAGAGACGAG 171197 Query 22870 GGTCTACACTGTGACTTTGCTTG 22892 ||| |||||||||||||||| || Sbjct 171198 GGTTTACACTGTGACTTTGCCTG 171220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356182755557533