Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_006146.1 Length=171096 Score E Sequences producing significant alignments: (Bits) Value seq26 143 3e-29 >seq26 Length=722459 Score = 143 bits (158), Expect = 3e-29 Identities = 115/139 (83%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199 |||| |||||||| || || ||| |||| || ||||||||||||||||||||||| || | Sbjct 623439 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGAGGAGGTGA 623380 Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259 ||||||||||||| | || | |||| || ||| ||||| |||||||| ||||| |||| Sbjct 623379 TGCCACAGGCTGAGGACCATGGCCCCAACATCAAGGAGCATGTGAACTCCCTGGGGGAGA 623320 Query 10260 ATCTAAAGACCCTAAGGCT 10278 | || |||||||| ||||| Sbjct 623319 AGCTGAAGACCCTCAGGCT 623301 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418 |||| || || || || |||||||||||||||||||| |||||||| || || ||||| | Sbjct 621090 AGCTCCAAGAGAAGGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 621031 Query 10419 TAGAAGCATACATGAC 10434 ||||||| |||||||| Sbjct 621030 TAGAAGCCTACATGAC 621015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547299070527360