Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq8558 178 2e-39 seq11356 152 9e-32 seq3070 152 9e-32 seq1561 150 3e-31 seq6001 141 2e-28 seq688 136 7e-27 seq2241 127 4e-24 seq2057 122 2e-22 seq7544 114 2e-20 seq6260 113 8e-20 seq1010 111 3e-19 seq11564 86.0 1e-11 >seq8558 Length=1191863 Score = 178 bits (196), Expect = 2e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || |||||||| |||||||| ||||| || || || | |||||||| Sbjct 300022 ACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 299963 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| || || || ||||| || || |||||||| || ||||||||||| || || Sbjct 299962 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCCTTATCCTGG 299903 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||| ||| |||||||||||| | || || |||| ||||||||| || Sbjct 299902 ATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 299843 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || |||||||| ||||| ||||||||| || Sbjct 299842 CCGGTCAGGGTCTTCACGAAAATCTGCATTTTG 299810 >seq11356 Length=1134914 Score = 152 bits (168), Expect = 9e-32 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 68246 GCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCC 68305 ||||| ||||| || || ||||| ||||| |||||||| || || || || || | ||| Sbjct 1059007 GCGCAGGACCAAATGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCC 1059066 Query 68306 ATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTT 68365 ||| || | ||| |||||||| || || | || || ||||| || || ||||| || || Sbjct 1059067 ATCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCTTT 1059126 Query 68366 GTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGAT 68425 ||||| ||||| |||||||| |||||||||||| | || || |||| |||||| Sbjct 1059127 TTCTTGGATCTTCCCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGAT 1059186 Query 68426 GGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||| || || || | |||||| || || ||||||||| Sbjct 1059187 GGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCATT 1059223 >seq3070 Length=217634 Score = 152 bits (168), Expect = 9e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || |||||||| |||||||| ||||| || || || | |||||||| Sbjct 177711 ACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 177770 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || || || || ||||| || || ||||| | | ||||||||||| || || Sbjct 177771 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAAGGAGGATGCCTTCCTTATCCTGG 177830 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||| ||| |||||||||||| || || || |||| ||||| ||| || Sbjct 177831 ATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGACTCCACCTCCAGGGTGACGGTCTTG 177890 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||||| | ||||| |||||||| Sbjct 177891 CCAGTCAGGGTCGTCACGAAGATCTGCAT 177919 >seq1561 Length=353970 Score = 150 bits (166), Expect = 3e-31 Identities = 160/210 (76%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || ||||| | |||||||||||||| || || || | |||||||| Sbjct 203105 ACCAGGTGCAGGGTCAACTCTCTCTGGATGTTATAATCAGAAAGAGTGCGGCCATCTTCC 203046 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC-GGGTGGAATGCCTTCCTTGTCTTG 68371 | ||| || || || || ||||| || || ||||| ||| || ||||||||||| || || Sbjct 203045 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGGATGCCTTCCTTATCCTG 202986 Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431 ||||| ||||| ||| |||||||| ||| | || || |||| ||||||||| || Sbjct 202985 GATCTTGGCCTTCACGTTCTCGATGGCGTCACTGGGCTCCACCTCCAGGGTGATGGTCTT 202926 Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | |||||| ||||| |||||||| Sbjct 202925 ACCAGTCAAGGTCTTCACGAAGATCTGCAT 202896 >seq6001 Length=82083 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || |||||||| |||||||| ||||| || || || |||||||| Sbjct 45617 ACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCTTCC 45676 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || | || || ||||| || || ||||| || || |||||||| || || || Sbjct 45677 AGCTGTTTGCTTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTTTCCTGG 45736 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||| ||| |||||||||||| | || || |||| ||||||||| || Sbjct 45737 ATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 45796 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || | ||| || ||||| |||||| || || Sbjct 45797 CCAGTCAAGGTTTTCACGAAGATCTGCCTTTTG 45829 >seq688 Length=501387 Score = 136 bits (150), Expect = 7e-27 Identities = 162/220 (74%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 68242 GAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCC 68301 |||| | ||| || | || || |||||||| ||||| ||||| || || || | || Sbjct 311233 GAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAT 311292 Query 68302 TCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTT 68361 |||||||| | ||||| | || || || |||||||| |||||||| ||||| |||| Sbjct 311293 GTCCATCTTCCAGTTGCTTGTCAGCAAAGATCAGTCTTTGCTGGTCGGGAGGAATTCCTT 311352 Query 68362 CCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGG 68421 ||||||| || ||||| |||| ||| || || || || | | ||| || || | | Sbjct 311353 CCTTGTCCTGGATCTTGACCTTTACGTTTTCTATTGTATCCGAGGGTTCGACCTCGAGAG 311412 Query 68422 TGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || |||||||| |||||||| | ||| |||||||| Sbjct 311413 TGATAGTCTTTCCCGTCAGGGTCTTCATGAAAATCTGCAT 311452 >seq2241 Length=1355799 Score = 127 bits (140), Expect = 4e-24 Identities = 160/220 (73%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 68242 GAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCC 68301 |||| | ||| || | || || |||||||| ||||| ||||| || || || | | | Sbjct 781211 GAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAATAC 781270 Query 68302 TCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTT 68361 ||||| || | ||||| || || || || |||||||| ||||| || ||||| |||| Sbjct 781271 GTCCATCGTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTT 781330 Query 68362 CCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGG 68421 ||||||| || ||||| ||||| || || || || | | ||| || || | | Sbjct 781331 CCTTGTCCTGGATCTTGGCCTTTACATTTTCTATTACATCCGAGGGTTCGACCTCGAGAG 781390 Query 68422 TGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||||| || ||||| |||||||| ||||| |||||||| Sbjct 781391 TGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 781430 >seq2057 Length=292531 Score = 122 bits (134), Expect = 2e-22 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 68242 GAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCC 68301 |||| | ||| || | || || |||||||| ||||| ||||| || || | | || | Sbjct 86994 GAAGTCTCAACACAATATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAAACAAAGTAC 86935 Query 68302 TCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTT 68361 |||||||| | ||||| || || || || |||||||| ||||| |||| ||| |||| Sbjct 86934 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGTGAAATTCCTT 86875 Query 68362 CCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGG 68421 ||||||| || ||||| ||||| || || || || || | ||| || || | | Sbjct 86874 CCTTGTCCTGGATCTTGGCCTT-ACATTTTCTATTGTATCCAAGGGTTCGACCTCGAGAG 86816 Query 68422 TGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCA 68460 |||||| | |||| || |||||||| ||||| ||||||| Sbjct 86815 TGATGG-TCTTCCTGTCAGGGTCTTCACGAAAATCTGCA 86778 >seq7544 Length=40362 Score = 114 bits (126), Expect = 2e-20 Identities = 146/200 (73%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 68262 AGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTC 68321 || |||||||| ||||| ||||| | || || | || | |||||||| | ||||| Sbjct 28996 AGAGTGGACTCCTTTTGAATGTTGTCGTCAGAAAA-GTACATCCATCTTCCAGTTGCTTG 29054 Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381 || || || || |||||||| ||||| || | ||| ||||||||||| || ||||| ||| Sbjct 29055 CCAGCAAAGATCAGTCTTTGCTGGTCAGGAGAAATTCCTTCCTTGTCCTGGATCTTGGCC 29114 Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 || || || || || || | | ||| || || | |||| ||| || ||| | ||| Sbjct 29115 TTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGAGGGTCTTCCCCATCAGG 29174 Query 68442 GTCTTGACGAATATCTGCAT 68461 |||| ||||| |||||||| Sbjct 29175 GTCTCCACGAAAATCTGCAT 29194 >seq6260 Length=1196837 Score = 113 bits (124), Expect = 8e-20 Identities = 142/194 (73%), Gaps = 1/194 (1%) Strand=Plus/Minus Query 68269 ACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGA 68328 ||||||| |||||||| | ||| || || || |||||||| | |||||| || || | Sbjct 647309 ACTCTTTCTGGATGTTGTGATCAGAAAGAGTGTGGCCATCTTCCAGCTGCTTGCCTGCAA 647250 Query 68329 ATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGG 68388 | ||||| || || || | ||| ||| |||||||||| || || ||||| ||||| || Sbjct 647249 AGATGAGCCTCTGCTGTTGGGGAGGA-TGCCTTCCTTATCCTGCATCTTGGCCTTCACAT 647191 Query 68389 CCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGA 68448 | |||| |||| | ||||| |||| ||||||||| || | || | |||||| | Sbjct 647190 TCCTGATGATGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCTGGTCAAGGTCTTCA 647131 Query 68449 CGAATATCTGCATT 68462 |||| || ||| || Sbjct 647130 CGAAGATTTGCGTT 647117 >seq1010 Length=438066 Score = 111 bits (122), Expect = 3e-19 Identities = 158/221 (71%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 68242 GAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCC 68301 |||| | || ||| | || || || ||||| ||||| ||||| || || | | || | Sbjct 115245 GAAGTCTCACTACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGCCAAAGTAC 115186 Query 68302 TCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTT 68361 ||||||| | ||||| || || || || |||||||| ||||| || ||||| |||| Sbjct 115185 GTCCATCTTTCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTT 115126 Query 68362 CCTTGTCTTGAATCTTTGCCTTGAC-GGCCTCGATGGTGTCTGCTGATTCTACTTCCAAG 68420 ||||||| || |||| ||||| || || || || |||| | ||| || || | Sbjct 115125 CCTTGTCCTGGCTCTTGGCCTTTACATTTTTCTATTGTATCTGAGGGTTCAACCTCGAGA 115066 Query 68421 GTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||||| | || || |||||||| ||||| |||||||| Sbjct 115065 GTGATGGCCATCCCTGTCAGGGTCTTCACGAAAATCTGCAT 115025 >seq11564 Length=833382 Score = 86.0 bits (94), Expect = 1e-11 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 84451 AGAGCGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTT 84510 ||||||||||| |||||||||||| ||||| || ||||||| || ||||||||||| Sbjct 226504 AGAGCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTT 226445 Query 84511 CGAGCCCCACATCGGGC 84527 |||||||||| | |||| Sbjct 226444 CGAGCCCCACGTTGGGC 226428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921487486000920