Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq1010 86.0 4e-12 seq1833 82.4 5e-11 >seq1010 Length=438066 Score = 86.0 bits (94), Expect = 4e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||| || ||||| |||||||||||||| ||||| ||||| | ||| |||| || | Sbjct 115141 ACCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGAAAGATGGACGTACTTTGGCTGACT 115200 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTA 22043 |||| ||||| ||||| |||||||||||| | ||| Sbjct 115201 ACAACATTCAAAAGGAGTCTACTCTTCATCTTGTA 115235 >seq1833 Length=323201 Score = 82.4 bits (90), Expect = 5e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 21948 AACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGAT 22007 ||||| || ||||| |||||||||||||| ||||| |||||| | ||| || | || Sbjct 75915 AACCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGAC 75974 Query 22008 TACAATATTCAGAAGGAATCTACTCTTCAT 22037 ||||| ||||| ||||| || ||||||||| Sbjct 75975 TACAACATTCAAAAGGAGTCCACTCTTCAT 76004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358073685630694