Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq790 93.3 4e-14 >seq790 Length=469007 Score = 93.3 bits (102), Expect = 4e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 20249 TGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCC 20308 || || | ||| || || | |||| |||||||| ||||| || || || |||| ||| Sbjct 200252 TGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCCAGGCCC 200193 Query 20309 ATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGA 20368 |||||||| |||||||| |||||||| ||||| |||||||||| | || || || || Sbjct 200192 ATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGG 200133 Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCAT 20397 || | ||| || || || || ||||| Sbjct 200132 CAAAGGGCGTGGCACGGGGGTAGGGCCAT 200104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441308188539240