Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq8558 122 2e-22 seq3070 114 3e-20 seq1561 113 1e-19 seq688 109 1e-18 seq1478 105 2e-17 seq11454 98.7 2e-15 seq379 95.1 3e-14 seq1036 89.7 1e-12 >seq8558 Length=1191863 Score = 122 bits (134), Expect = 2e-22 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | || ||||| || ||||| | || || ||||| ||| Sbjct 300004 TCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 299945 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || ||||| ||||| ||||||||||| || || |||||||| Sbjct 299944 ATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTC 299885 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| |||||||| ||||| ||| Sbjct 299884 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 299825 Query 288463 AATATCTGCATTATG 288477 || ||||||||| || Sbjct 299824 AAAATCTGCATTTTG 299810 >seq3070 Length=217634 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | || ||||| || ||||| | ||||| ||||| ||| Sbjct 177729 TCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAG 177788 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || | |||| ||||| ||||||||||| || || |||||||| Sbjct 177789 ATGAGCCTCTGCTGGTCAAGGAGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTC 177848 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || || || || |||| ||||| || ||||| ||| | ||| Sbjct 177849 TCGATGGTGTCACTGGACTCCACCTCCAGGGTGACGGTCTTGCCAGTCAGGGTCGTCACG 177908 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 177909 AAGATCTGCAT 177919 >seq1561 Length=353970 Score = 113 bits (124), Expect = 1e-19 Identities = 141/192 (73%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||| | ||||| ||||| || | || ||||| || ||||| | ||||| ||||| ||| Sbjct 203087 TCTCTCTGGATGTTATAATCAGAAAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAG 203028 Query 288343 ATCAGACGCTGTTGAGAATCTGGG-ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | ||| || | ||| || ||||| ||||||||||| || || |||||||| Sbjct 203027 ATGAGCCTCTGCTGGTCAGGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTT 202968 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || || | || || || || ||||| ||||| || |||| ||||| || Sbjct 202967 CTCGATGGCGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCAC 202908 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 202907 GAAGATCTGCAT 202896 >seq688 Length=501387 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||||| ||| || ||||| || || ||||| | Sbjct 311226 CCACCATGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 311285 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCT 288363 | || |||| ||||| | ||| || | || |||||||| | |||| | | | Sbjct 311286 AAAGTATGTCCATCTTCCAGTTGCTTGTCAGCAAAGATCAGTCTTTGCTGGTCGGGA--- 311342 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || |||||||| || |||||||| || | || ||||||||||| | ||| | ||| Sbjct 311343 GGAATTCCTTCCTTGTCCTGGATCTTGACCTTTACGTTTTCTATTGTATCCGAGGGTTCG 311402 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| || ||||| ||||| | ||| |||||||| Sbjct 311403 ACCTCGAGAGTGATAGTCTTTCCCGTCAGGGTCTTCATGAAAATCTGCAT 311452 >seq1478 Length=366608 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | | ||||| ||||||| | ||||| ||||| ||| Sbjct 273066 TCTTTCTGGATGTTGTAATCAGAAATAGTGCGGCCGTCTTACAGCTGTTTGCCTGCAAAG 273007 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || | | || || ||||||||||||||| | || || ||||| || Sbjct 273006 ATGAGCCTCTGCTGGTCAGCGGGCATGCCTTCTTTATCCTGGGTCTTGGCCTTCACATTC 272947 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 | || | || || | || || || || ||||| ||||| || ||||| ||||| || Sbjct 272946 TTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCCCG 272887 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 272886 AAGATCTGCAT 272876 >seq11454 Length=977069 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || ||||| | || | || || || | ||| || || || ||| Sbjct 82850 TCCTTTTGAATGTTGTAGTCATACAAAGTATGGCCATCCTCCAGTTGCTTGCCAGCAAAG 82909 Query 288343 ATCAGAC---GCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | |||| | || | |||||||||||||||||||| || || | || || Sbjct 82910 ATCAGTCTTTGCTGGTCAGGA---GGGATTCCTTCTTTATCCTGCATCTTGGTCTTTACA 82966 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 |||||||| | ||| | ||| || | ||| ||||| |||||||| ||||| ||||| Sbjct 82967 TTTTCTATTGTATCTGAAGGTTCAACCTTGAGAGTGATGGTCTTCCCTGTCAGGGTCTTC 83026 Query 288460 ACGAATATCTGCAT 288473 | ||| |||||||| Sbjct 83027 ATGAAAATCTGCAT 83040 >seq379 Length=586137 Score = 95.1 bits (104), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 10/230 (4%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||||| ||| || ||||| | | | ||| | Sbjct 190721 CCACCATGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAGTGCTGTGGTCAGAC 190662 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCT 288363 | || | ||| ||||| | ||| || | || |||||||| | |||| | || | Sbjct 190661 AAAGTACATCCATCTTCCAGTTGCTTGTCAGCAAAGATCAGTCTTTGCTGGTCAGGA--- 190605 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||| |||| ||||||||||| || || || || |||||||| | ||| | ||| Sbjct 190604 GGAATTGCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCG 190545 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| |||||| |||| ||||| ||||| |||||||| Sbjct 190544 ACCTCGAGAGTGATGGTCTTC----TCAGGGTCTTCACGAAAATCTGCAT 190499 >seq1036 Length=435897 Score = 89.7 bits (98), Expect = 1e-12 Identities = 161/232 (69%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || |||| | || ||||||| ||| || ||||| || || |||| | Sbjct 183692 CCACCACGAAGTCACAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGCAGTCAGAC 183751 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCT 288363 | || | ||| || || ||||| || | || |||||||| | |||| | || | Sbjct 183752 AAAGTACATCCATCCTCCAATTGCTTGACAGCAAAGATCAGTCTTTGCTGGTCAGGA--- 183808 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||||| ||||||||||| || || || || |||||||| | ||| | || Sbjct 183809 GGAGTTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTTG 183868 Query 288424 ACTTC--GAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||| ||||| |||||||| ||| ||||| | ||| |||||||| Sbjct 183869 ACCTCGAGAGAGTGATGGTCTTCCCCGTC--GGTCTTCATGAAAATCTGCAT 183918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179477396175058