Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq8558 136 4e-27 seq6001 122 9e-23 seq11356 114 1e-20 seq2241 111 2e-19 seq3070 107 2e-18 seq688 107 2e-18 seq1478 104 2e-17 seq1833 102 8e-17 seq1010 102 8e-17 seq6260 98.7 1e-15 seq2057 96.9 3e-15 seq7544 95.1 1e-14 seq11454 87.8 2e-12 seq323 84.2 2e-11 >seq8558 Length=1191863 Score = 136 bits (150), Expect = 4e-27 Identities = 150/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||||||||| | | ||||| | ||||| ||||||||||| Sbjct 300010 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 299951 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||||| |||||||||||| || || ||||| || || || || || ||| Sbjct 299950 GCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 299891 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || |||| || ||||| || | || | |||||||||||||| || Sbjct 299890 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 299831 Query 64427 TTTACGAAAATTTGCATTTT 64446 || |||||||| |||||||| Sbjct 299830 TTCACGAAAATCTGCATTTT 299811 >seq6001 Length=82083 Score = 122 bits (134), Expect = 9e-23 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||||||||| | | ||| | | ||||| ||||| |||| Sbjct 45629 GTAGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCTTCCAGCTGTTTGCTT 45688 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||||| ||||||||| || || || ||||||||||| || || || ||| Sbjct 45689 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTTTCCTGGATCTTGGCCTTC 45748 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || |||| || ||||| || | || | ||||||||| ||||| ||| Sbjct 45749 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAAGGTT 45808 Query 64427 TTTACGAAAATTTGCATTTT 64446 || ||||| || ||| |||| Sbjct 45809 TTCACGAAGATCTGCCTTTT 45828 >seq11356 Length=1134914 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || |||||||| || |||||||| || | | ||||||| | || || ||||| || ||| Sbjct 1059026 GTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCCAGCTGTTTCCCG 1059085 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || | || ||||||||| || || || || ||||||||||| || || ||| Sbjct 1059086 GCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCTTTTTCTTGGATCTTCCCCTTG 1059145 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || |||| || ||||| || | || | |||||| || ||||| || Sbjct 1059146 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTCAAGGTC 1059205 Query 64427 TTTACGAAAATTTGCATT 64444 || || || || |||||| Sbjct 1059206 TTCACAAAGATCTGCATT 1059223 >seq2241 Length=1355799 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| | | ||| | ||| ||||||| || || || |||||||||||||| || | Sbjct 781203 ACCGCCATGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 781262 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | | || | || || || |||||||| ||| | || || | |||||||| ||||| Sbjct 781263 CAAAATACGTCCATCGTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGG 781322 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||||||| || || || || || ||||||| || | | ||| || || || Sbjct 781323 AATTCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTTCTATTACATCCGAGGGTTCGAC 781382 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | ||| | |||||| || |||| || || |||||||| ||||| || Sbjct 781383 CTCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATT 781433 >seq3070 Length=217634 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||||||||| | | ||||| | ||||| ||||| ||||| Sbjct 177723 GTAGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGTTTGCCT 177782 Query 64307 GCATAAATGAGCCGCTGCTGGTC-GGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTT 64365 ||| | ||||||| ||||||||| ||||| || ||||| || || || || || ||| Sbjct 177783 GCAAAGATGAGCCTCTGCTGGTCAAGGAGG-ATGCCTTCCTTATCCTGGATCTTGGCCTT 177841 Query 64366 TACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 || ||| | || |||| || ||||| || | || ||||||||||| |||| || Sbjct 177842 CACGTTCTCGATGGTGTCACTGGACTCCACCTCCAGGGTGACGGTCTTGCCAGTCAGGGT 177901 Query 64426 TTTTACGAAAATTTGCAT 64443 | ||||| || ||||| Sbjct 177902 CGTCACGAAGATCTGCAT 177919 >seq688 Length=501387 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| | ||| ||||||| || || || |||||||||||||| || | | || | | Sbjct 311237 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCC 311296 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 ||||| || |||||| | ||| | || || | ||||||||||||||||||||||| || Sbjct 311297 ATCTTCCAGTTGCTTGTCAGCAAAGATCAGTCTTTGCTGGTCGGGAGGAATTCCTTCCTT 311356 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 || || || || |||||| || | |||||| || || || || | ||| | Sbjct 311357 GTCCTGGATCTTGACCTTTACGTTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTGAT 311416 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||||| || |||| || || | |||||| ||||| || Sbjct 311417 AGTCTTTCCCGTCAGGGTCTTCATGAAAATCTGCATATT 311455 >seq1478 Length=366608 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||||||||| | | ||||| |||||| ||||| ||||| Sbjct 273072 GTAGACTCTTTCTGGATGTTGTAATCAGAAATAGTGCGGCCGTCTTACAGCTGTTTGCCT 273013 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||||| ||||||||| | || || |||||||| || || | || ||| Sbjct 273012 GCAAAGATGAGCCTCTGCTGGTCAGCGGGCATGCCTTCTTTATCCTGGGTCTTGGCCTTC 272953 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || |||| || ||||| || | || | ||||||||| |||| || Sbjct 272952 ACATTCTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 272893 Query 64427 TTTACGAAAATTTGCAT 64443 || |||| || ||||| Sbjct 272892 TTCCCGAAGATCTGCAT 272876 >seq1833 Length=323201 Score = 102 bits (112), Expect = 8e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 ||||||| || || || |||||||||||||| || | | || || | ||||| || Sbjct 76006 AGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGT 75947 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 |||||||| ||| | || || | ||||||| | ||||||| |||| || ||||| || Sbjct 75946 TGCTTGCCAGCAAAGATCAGTCTTTGCTGGTTAGAAGGAATTACTTCCTTATCTTGGATC 75887 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 || ||||||| || | |||||| || || || || | ||| | |||||| || Sbjct 75886 TTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTGATGGTCTTCCCT 75827 Query 64418 GTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| | || || ||||| ||||| Sbjct 75826 GTCAGGATCTTCACAAAAATCTGCAT 75801 >seq1010 Length=438066 Score = 102 bits (112), Expect = 8e-17 Identities = 151/213 (71%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||||| || || || |||||||||||||| || || | || || | |||| Sbjct 115234 ACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGCCAAAGTACGTCCATCTTTC 115175 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 || |||||||| ||| | || || | |||||||| |||||||||||||| || || || Sbjct 115174 AGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGG 115115 Query 64355 ATTTTTTGCTTTACA-ACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 | || ||||||| || | |||||| || || || || | ||| | || | | Sbjct 115114 CTCTTGGCCTTTACATTTTTCTATTGTATCTGAGGGTTCAACCTCGAGAGTGATGGCCAT 115055 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || |||| || || |||||||| ||||| || Sbjct 115054 CCCTGTCAGGGTCTTCACGAAAATCTGCATATT 115022 >seq6260 Length=1196837 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/199 (71%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||| | ||||| || ||||||| ||| | | ||| | | ||||| ||||||||||| Sbjct 647313 GTCAACTCTTTCTGGATGTTGTGATCAGAAAGAGTGTGGCCATCTTCCAGCTGCTTGCCT 647254 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||||| |||||| | |||||| || ||||| || || || || || ||| Sbjct 647253 GCAAAGATGAGCCTCTGCTGTTGGGGAGG-ATGCCTTCCTTATCCTGCATCTTGGCCTTC 647195 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| | | | |||| || || || || | || | |||||||| |||||| || Sbjct 647194 ACATTCCTGATGATGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCTGGTCAAGGTC 647135 Query 64427 TTTACGAAAATTTGCATTT 64445 || ||||| |||||| ||| Sbjct 647134 TTCACGAAGATTTGCGTTT 647116 >seq2057 Length=292531 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/215 (71%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| | ||| | ||||| || || || |||||||||||||| || | || || | Sbjct 86990 TCTCAACACAATATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAAACAAAGTACGTCC 86931 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 ||||| || |||||||| ||| | || || | |||||||| || | ||||||||| || Sbjct 86930 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGTGAAATTCCTTCCTT 86871 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 || || | | || || ||||| || | |||||| || || || || | ||| | Sbjct 86870 GTCCTGGA-TCTTGGCCTTACATTTTCTATTGTATCCAAGGGTTCGACCTCGAGAGTGAT 86812 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCA 64442 |||||| || |||| || || |||||||| |||| Sbjct 86811 GGTCTT-CCTGTCAGGGTCTTCACGAAAATCTGCA 86778 >seq7544 Length=40362 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/219 (70%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| | ||| ||| ||| || || || ||||||||||||| || | | || | | Sbjct 28980 TCTCAACACAAGACGAAGAGTGGACTCCTTTTGAATGTTGTCGTCAG-AAAAGTACATCC 29038 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 ||||| || |||||||| ||| | || || | |||||||| |||| ||||||||| || Sbjct 29039 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGAAATTCCTTCCTT 29098 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 || || || || ||||||| || | |||||| || || || || | ||| | Sbjct 29099 GTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGAG 29158 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 |||||| || ||| || | |||||||| ||||| || Sbjct 29159 GGTCTTCCCCATCAGGGTCTCCACGAAAATCTGCATATT 29197 >seq11454 Length=977069 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 64246 CGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCC 64305 ||| || || |||||||||||||| || | || | | || || || |||||||| Sbjct 82843 CGTGGACTCCTTTTGAATGTTGTAGTCATACAAAGTATGGCCATCCTCCAGTTGCTTGCC 82902 Query 64306 GGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTT 64365 ||| | || || | |||||||| ||||| ||||||||||| || || || || ||| Sbjct 82903 AGCAAAGATCAGTCTTTGCTGGTCAGGAGGGATTCCTTCTTTATCCTGCATCTTGGTCTT 82962 Query 64366 TACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 |||| || | |||||| | || || | | ||| | |||||| || |||| || Sbjct 82963 TACATTTTCTATTGTATCTGAAGGTTCAACCTTGAGAGTGATGGTCTTCCCTGTCAGGGT 83022 Query 64426 TTTTACGAAAATTTGCATTTT 64446 || | |||||| ||||| || Sbjct 83023 CTTCATGAAAATCTGCATCTT 83043 >seq323 Length=596616 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 6/228 (3%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTA-GATGAATCGTCGATTCTTTTTGAATGTTGTAATCTG 64274 ||| || || | ||| | || || |||||| || || || |||||||||||||| || Sbjct 311033 ACCACCACGAAGTCTTAACATTAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC-- 311090 Query 64275 CGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAG 64334 | || || | ||||| || |||||||| || | || || | |||| ||| |||| Sbjct 311091 --AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCGAAGATTAGTCTTTGCTTGTCAGGAG 311148 Query 64335 GAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCA 64394 |||||| ||| ||||| || | || ||||||| | |||||| || || | Sbjct 311149 GAATTCTTTCCTTTTCCTGGGTCTTGGCCTTTACATTTTTTGTTGTATCTGAGGGTTCAA 311208 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCA 64442 |||| | ||| | |||| | || | || ||||| | |||||| |||| Sbjct 311209 CTTCAAGAGTGATGGTCATCCCCG-GAAGGTTTTCATGAAAATCTGCA 311255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499571658246840