Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq11454 84.2 2e-11 seq11356 84.2 2e-11 >seq11454 Length=977069 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||||||||||||||| || |||| | ||||| ||||| || || | | Sbjct 82847 GACTCCTTTTGAATGTTGTAGTCATACAAAGTATGGCCATCCTCCAGTTGCTTGCCAGCA 82906 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGT-TTTAA 138539 |||| || | || ||||| ||||| || |||||||| || || | || || |||| Sbjct 82907 AAGATCAGTCTTTGCTGGTCAGGAGGGATTCCTTCTTTATC-CTGCATCTTGGTCTTTAC 82965 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | ||| | || || | | || |||| || || | || || || ||||| || || Sbjct 82966 ATTTTCTATTGTATCTGAAGGTTCAACCTTGAGAGTGATGGTCTTCCCTGTCAGGGTCTT 83025 Query 138600 TACAAAAATCTGCAT 138614 | ||||||||||| Sbjct 83026 CATGAAAATCTGCAT 83040 >seq11356 Length=1134914 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 138396 CAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACG 138455 ||| |||| || ||||| | | || || || || ||||||||||| || || || Sbjct 1059004 CAAGCGCAGGACCAAATGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCG 1059063 Query 138456 CGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTC 138515 | ||||| || ||||| |||| | |||| | | ||| ||||| || || || || || Sbjct 1059064 CCCATCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTC 1059123 Query 138516 TTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGT 138575 ||| || ||| || || | | || | |||||| | | ||||||||| | || Sbjct 1059124 TTTTTCTTGGATCTTCCCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGT 1059183 Query 138576 CAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || |||||||||| || || ||||| |||||||| Sbjct 1059184 GATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 1059222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496189753387920