Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30]
11,711 sequences; 2,280,727,784 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq2057 86.0 4e-12
seq688 86.0 4e-12
seq2241 84.2 2e-11
>seq2057
Length=292531
Score = 86.0 bits (94), Expect = 4e-12
Identities = 156/226 (69%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| | | ||| || || | |||||| || || || ||||| |||||||| ||
Sbjct 87001 CCACCATGAAGTCTCAACACAATATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAAAC 86942
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | | | | ||||| | ||| |||||||| | |||| | || ||||| || |
Sbjct 86941 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGTGAA 86882
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|||||||||||||| || ||| ||||| ||||||| ||||| ||| ||
Sbjct 86881 ATTCCTTCCTTGTCCTGGATCTTG-GCCTTACATTTTCTATTGTATCCAAGGGTTCGACC 86823
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCA 15175
|| | || ||||| || |||||||| || || || ||||| ||||
Sbjct 86822 TCGAGAGTGATGGTCTT-CCTGTCAGGGTCTTCACGAAAATCTGCA 86778
>seq688
Length=501387
Score = 86.0 bits (94), Expect = 4e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| | | ||| || || | |||||| || || || ||||| |||||||| ||
Sbjct 311226 CCACCATGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 311285
Query 15010 AGAAT-TCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068
| | | | || | ||||| | ||| ||| |||| | |||| | || |||||| ||
Sbjct 311286 AAAGTATGTC-CATCTTCCAGTTGCTTGTCAGCAAAGATCAGTCTTTGCTGGTCGGGAGG 311344
Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128
||||||||||||||| || ||| ||||| ||||||| ||||| ||| ||
Sbjct 311345 AATTCCTTCCTTGTCCTGGATCTTGACCTTTACGTTTTCTATTGTATCCGAGGGTTCGAC 311404
Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
|| | || || || || || ||||| || || | ||||| ||||||||
Sbjct 311405 CTCGAGAGTGATAGTCTTTCCCGTCAGGGTCTTCATGAAAATCTGCATATT 311455
>seq2241
Length=1355799
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 14961 TCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGC 15020
||| || || | |||||| || || || ||||| |||||||| || | ||| | |
Sbjct 781215 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAATACGTCC 781274
Query 15021 GTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTT 15080
|| || | ||| ||||| || | |||| | || ||||| ||||||||||||||
Sbjct 781275 ATCGTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTT 781334
Query 15081 GTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAAT 15140
||| || ||| |||||| ||||||| ||| ||| || || | || ||
Sbjct 781335 GTCCTGGATCTTGGCCTTTACATTTTCTATTACATCCGAGGGTTCGACCTCGAGAGTGAT 781394
Query 15141 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
||| || || ||||| || || || ||||| ||||||||
Sbjct 781395 GGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATT 781433
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357340990221635
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |