Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq8558 122 1e-22 seq1478 109 6e-19 >seq8558 Length=1191863 Score = 122 bits (134), Expect = 1e-22 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || || | ||| | ||||| |||| || ||| || ||||| ||||| || || Sbjct 300041 GCCACCCCTCAGACGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGA 299982 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 |||||||| | || || ||||||||||| || || || | | ||||||||||| || Sbjct 299981 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGG 299922 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | || ||||| ||| |||||| ||| | || | | ||||| || | ||||| Sbjct 299921 GATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCAC 299862 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 |||| |||||||| ||||| ||||| || || || || || ||||||||| Sbjct 299861 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTG 299810 >seq1478 Length=366608 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || |||| ||| | ||||| |||| ||| ||| || ||||| ||||| || || Sbjct 273103 GCCACCCCTTAGACGGAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGA 273044 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 | |||||| |||| | ||||| ||||| || || || | | ||||||||| || || Sbjct 273043 AATAGTGCGGCCGTCTTACAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGCGGG 272984 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 || || || || ||| | |||| ||| | || | ||||| || | ||||| Sbjct 272983 CATGCCTTCTTTATCCTGGGTCTTGGCCTTCACATTCTTGATGGTGTCACTGGGCTCCAC 272924 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| |||||||| ||||||||||| || || | ||||| ||||| Sbjct 272923 CTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCCCGAAGATCTGCAT 272876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565155656163720