Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq11356 91.5 1e-13 >seq11356 Length=1134914 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 39501 CAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCG 39560 ||| ||||| |||||||||| |||| |||||| || || || || || | || ||| Sbjct 1059004 CAAGCGCAGGACCAAATGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCG 1059063 Query 39561 TTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTC 39620 |||| |||| ||||||||| |||| || || | |||||| || | ||| | ||| || Sbjct 1059064 CCCATCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTC 1059123 Query 39621 TTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTC--TGCGCTTTCCACGTCCAAA 39678 ||| || || || || | || | | ||||| || ||| |||| |||| Sbjct 1059124 TTTTTCTTGGATCTTCCCCTTGACGTTCTCGATGGTGTCACTGGGCT--CCACCTCCAGG 1059181 Query 39679 GTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || || ||||| || || || || || ||||||||||| Sbjct 1059182 GTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 1059222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347320020696863