Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq11472 273 2e-68 seq2631 250 2e-61 seq11356 127 2e-24 seq8558 123 2e-23 seq6001 109 5e-19 seq1478 109 5e-19 seq3070 95.1 1e-14 seq1561 93.3 4e-14 >seq11472 Length=944226 Score = 273 bits (302), Expect = 2e-68 Identities = 433/614 (71%), Gaps = 10/614 (2%) Strand=Plus/Plus Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944 |||||||| ||| |||||||| || || || |||||||| ||| ||| ||||||||| Sbjct 784346 GAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCGTTGGA 784405 Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCC 133004 || || | ||||||||| || || |||||||||||||| || || | || ||| || Sbjct 784406 AAATGTGAGGCCGGGCATCAGTCCTCGTTTTTTGAGCCAGAACATCGATGCAAAAGAACC 784465 Query 133005 CGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTC 133064 ||| |||||| || || || || || || || | | || || ||| |||| || || Sbjct 784466 AGAAGAGAAGATTCCTTCCACTGCGGCAAAGGCTGCGACACGTTCTCCGTACGTAGCCTC 784525 Query 133065 TTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT-TTCTTTGACGCACGGCATCGTTT 133123 |||| |||||| ||||| ||||| || ||||| |||||| || || ||||| || | Sbjct 784526 TTTGTCCCCGATCCGGCGCACGGCCCAATCTGCCTTCTTCTTT-ACACAAGGCATTGTCT 784584 Query 133124 CGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAA---CGCACGTAGGTGTCGATGA 133180 ||||||| || || | | | || | ||| |||| | || ||||| | || Sbjct 784585 CGATGGCATTGAAGA---GAAATTCCCTTTCTCTGGAATCTTTAATGTGAGTGTCAACGA 784641 Query 133181 GGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACC 133240 || |||||||| || ||| ||| |||| ||| ||||| |||||||| || || | Sbjct 784642 GGAGACTCTACATTTCAGAATGTGTGTTTTCCACGGCAATTTGGAAGCCGTAGAAACAAC 784701 Query 133241 GCGCCTCGACCACCTGCACTTCTTGAGCGAAA-CGCTCGACCAGATTTTCGTTGACGATG 133299 | || || | ||| |||||||| || ||| ||||| |||| ||||| || || ||| Sbjct 784702 GGGCTTCTGTAATCTGAACTTCTTG-GCTAAACCGCTCCACCAAGTTTTCATTTACTATG 784760 Query 133300 CCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTC 133359 || || || || || | || ||||| || ||| |||||| | ||| | ||| Sbjct 784761 CCATCACTTGCCGCAGAGAAAGCCAGAACATGCGAAGTGAAATATCTCTCCTCAGGCTTC 784820 Query 133360 AAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGAC 133419 | | |||| || | |||||||||| |||||||||||||| | |||||||| || Sbjct 784821 AGGGCTTCCCGGTGCTGAATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAAGGAA 784880 Query 133420 GCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAAC 133479 ||||| ||||| || ||| | ||| || || |||| || ||||| || ||| | Sbjct 784881 GCCTCAGCTTTCTTCTACGTCTGCCAAATATCACGGTATTCGATAGGAAAGATGACAGAG 784940 Query 133480 CGGCGGGGGTTTTC 133493 |||||||||||||| Sbjct 784941 CGGCGGGGGTTTTC 784954 >seq2631 Length=239737 Score = 250 bits (276), Expect = 2e-61 Identities = 642/962 (67%), Gaps = 37/962 (4%) Strand=Plus/Minus Query 132550 TAAAAGTCCGCATCCAAAGTAAAGG-------TGTCGTCCTTGGCAAACATCACGCCAAA 132602 || ||||| |||||||| ||||||| ||||| || | || ||||||| | Sbjct 171568 TAGAAGTCAGCATCCAAGGTAAAGGAATTCTCTGTCGGACTGG----ACGTCACGCCCAT 171513 Query 132603 TTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAG 132662 | ||||| ||||| || | |||||| | || ||||| || || |||| ||||| Sbjct 171512 CCTCTGATACTCGCCTACTCTCTTCTCAGAGAAGTTAGTCTTCCCTTCCAGTGAAATATT 171453 Query 132663 CGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAG 132722 | |||||| || | || || || || | |||| | ||| || | | Sbjct 171452 CTCCATAAAGTCAAGTGGATTTTCTACTCTGAAAACCTTGCCAACACCCAGCTCCAGCAT 171393 Query 132723 CAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAG 132782 || ||||| |||||||| |||||||| ||| ||| |||| || | ||||| | Sbjct 171392 AAGTCTGTCTGCCACGAATTCGATGTACTGCTTCATCAGAGCGCAGTTCA-TCCCAATGG 171334 Query 132783 ACG-CACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGA 132841 | ||| ||| | || || ||||| | || || ||| ||||||| |||||| Sbjct 171333 GCTTCACTGGCGGGGCCTCCGTGAGGAGCTCCTGTTCTATGCTAACCGCGT---TGACGA 171277 Query 132842 TT-TCCCTAACGCGCGCCGCGCTCGGCCGTT---GCACCAAATGCTTGAACATCAAGCAA 132897 || | ||| | | | || | || ||| | | || || | ||||||| ||| Sbjct 171276 TTATTCCTTTGACTCTCTGCTC-CGAAGGTTTGTGTAGCAGGTGTTCGAACATCGGGCAG 171218 Query 132898 GCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCG 132957 |||||||| || || || |||||||| ||| ||| ||||| ||| || || | |||| Sbjct 171217 GCAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCG 171158 Query 132958 GGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACG 133017 ||||| || || |||||||||||||| || || | || ||| || ||| |||||| Sbjct 171157 GGCATCAGTCCTCGTTTTTTGAGCCAGAACATCGATGCAAAAGAACCAGAAGAGAAGATT 171098 Query 133018 CCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATC 133077 || || || || || || || | | || || ||| |||| || |||||| ||||| Sbjct 171097 CCTTCCACTGCGGCAAAGGCTGCGACACGTTCTCCGTACGTAGCCTCTTTGTCCCCGATC 171038 Query 133078 CAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAAC 133137 | ||||| ||||| || | ||| |||| || || ||||| || |||||| | || || Sbjct 171037 CGGCGCACGGCCCAATCTGGCTT--CTTT-ACACA-GGCATTGTCTCGATGACATTGAAG 170982 Query 133138 AAACGGAGTTTCTCTTCCGAGGAACGC---ACGTAGGTGTCGATGAGGGTCGAATACATT 133194 | | | || | ||| |||| | || ||||| | |||| |||||| Sbjct 170981 AGA---AATTCCCTTTCTCTGGAATCTTTAATGTGAGTGTCAACGAGGAGACTCTACATT 170925 Query 133195 TCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACC 133254 || || ||| ||| |||| ||| ||||| |||||||| || || || || || | | Sbjct 170924 TCAGAATGTGTGTTTTCCACGGCAATTTGGAAGCCGTAGAAACAACGGGCTTCTGTAATC 170865 Query 133255 TGCACTTCTTGAGCGAAAC-GCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGC 133313 || |||||||| || || | |||| |||| ||||| || || ||||| || || || || Sbjct 170864 TGAACTTCTTG-GCTAAGCCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGC 170806 Query 133314 GAAAAAGGCCAGCACGTGCTTGA--TGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAG 133371 | || ||||| || || ||| |||||| | || | |||| | |||| | Sbjct 170805 AGAGAAAGCCAGAACATG--TGAAGTGAAATATCTCTTCTCAGGCTTCAGGGCTTCCCGG 170748 Query 133372 TCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTT 133431 | | |||||||||| |||||||||||||| | ||||| || || ||||| ||||| Sbjct 170747 TGCTGAATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAGAAGGAAGCCTCAGCTTTC 170688 Query 133432 TTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTT 133491 || ||| | ||| || || |||| || ||||| || ||| | |||||||||||| Sbjct 170687 TTATACGTCTGCCAAATATCACGGTATTCGATAGGAAAGATGACAGAGCGGCGGGGGTTT 170628 Query 133492 TC 133493 || Sbjct 170627 TC 170626 >seq11356 Length=1134914 Score = 127 bits (140), Expect = 2e-24 Identities = 163/222 (73%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || || || | || || || ||||||||| | || || ||| ||| Sbjct 1059223 AATGCAGATCTTTGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 1059164 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | || | || |||| || |||||||| || ||| | |||| Sbjct 1059163 TGACACCATCGAGAACG-TCAAGGGGAAGATCCAAGAAAAAGAGGGCATCCCCCCAGACC 1059105 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| || | || | || || ||||||||||| || | ||||||||| ||||||| Sbjct 1059104 AGCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCTGACTACA 1059045 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGA 38463 ||||||| || ||| | || ||||||||||| ||||| |||| Sbjct 1059044 ACATCCAGAAAGAATCCACTCTGCATTTGGTCCTGCGCTTGA 1059003 >seq8558 Length=1191863 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || ||||| || || || || ||||| ||||||||| | || || ||| || Sbjct 299811 AAAATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 299870 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | |||| | || | || |||| || || || || || ||| |||| Sbjct 299871 AGTGACACCATCGAGAACG-TGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCCGA 299929 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||| ||||||| | || ||||| |||||||| || | ||||| || || || Sbjct 299930 CCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTA 299989 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||| || || | || ||||| |||| || ||| |||| || ||| Sbjct 299990 CAACATCCAGAAAGAGTCAACCCTGCACCTGGTCCTCCGTCTGAGGGGTGGC 300041 >seq6001 Length=82083 Score = 109 bits (120), Expect = 5e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||| ||| || ||||| ||||| | || ||||| ||||||||| | || || ||| || Sbjct 45828 AAAAGGCAGATCTTCGTGAAAACCTTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCC 45769 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | |||| | || | || |||| || ||||| || || ||| | || Sbjct 45768 AGTGACACCATCGAGAACG-TGAAGGCCAAGATCCAGGAAAAAGAAGGCATCCCCCCTGA 45710 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||| ||||||| | || ||||||||||||| || | | ||| || || || Sbjct 45709 CCAGCAGAGGCTCATCTTTGCAAGCAAACAGCTGGAAGATGGCCACACTCTTTCTGATTA 45650 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||| || || | || ||||| |||| || || |||| || ||| Sbjct 45649 CAACATCCAGAAAGAGTCTACCCTGCACCTGGTCCTATGTCTGAGGGGTGGC 45598 >seq1478 Length=366608 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || |||| || || || |||||||| ||||||||| | || || ||| ||| Sbjct 272876 ATGCAGATCTTCGGGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 272935 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || | || || ||||| || || ||||| ||||| Sbjct 272936 GACACCATCAAGAATGTGAAGGCCAAGACCCAGGATAAAGAAGGCATGCCCGCTGACCAG 272995 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | || |||||||||||| | |||| ||||| | || |||||| Sbjct 272996 CAGAGGCTCATCTTTGCAGGCAAACAGCTGTAAGACGGCCGCACTATTTCTGATTACAAC 273055 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || || | || ||||| |||| || ||| | || || ||| Sbjct 273056 ATCCAGAAAGAGTCTACCCTGCACCTGGTCCTCCGTCTAAGGGGTGGC 273103 >seq3070 Length=217634 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| | || || || ||||| ||| ||||| | || || ||| ||| Sbjct 177919 ATGCAGATCTTCGTGACGACCCTGACTGGCAAGACCGTCACCCTGGAGGTGGAGTCCAGT 177860 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| || || || || || | | ||||| Sbjct 177859 GACACCATCGAGAACG-TGAAGGCCAAGATCCAGGATAAGGAAGGCATCCTCCTTGACCA 177801 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| ||||||| | || |||||||||||||| || | ||||| || || ||||| Sbjct 177800 GCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTTTCTGATTACAA 177741 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| || || | || ||||| |||| || | | |||| || ||| Sbjct 177740 CATCCAGAAAGAGTCTACCCTGCACCTGGTCCTCCATCTGAGGGGTGGC 177692 >seq1561 Length=353970 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || ||||||||| | || || ||| ||| Sbjct 202896 ATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 202955 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 ||| | | | |||| | || | || |||| || || || || || ||| || |||| Sbjct 202956 GACGCCATCGAGAACG-TGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCCTGACC 203014 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| ||||||| | || |||||||||||||| || | ||||| || || || | Sbjct 203015 AGCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTTTCTGATTATA 203074 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| | || ||| ||||| |||| || ||| |||| || ||| Sbjct 203075 ACATCCAGAGAGAGTTGACCCTGCACCTGGTCCTCCGTCTGAGGGGTGGC 203124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500099580954240