Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq11564 93.3 5e-14 seq11435 93.3 5e-14 seq4708 93.3 5e-14 seq10026 89.7 6e-13 seq565 89.7 6e-13 seq541 86.0 7e-12 >seq11564 Length=833382 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 14472 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 14530 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 32458 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 32516 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 230236 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 230178 >seq11435 Length=999106 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 303406 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 303464 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 327894 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 327836 >seq4708 Length=1250766 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 959981 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 960039 >seq10026 Length=7383 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||| | |||||| Sbjct 656 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCAACCCCCGT 714 >seq565 Length=520080 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||| ||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 322504 TAGCTCAGTAGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 322446 >seq541 Length=1676364 Score = 86.0 bits (94), Expect = 7e-12 Identities = 187/276 (68%), Gaps = 8/276 (3%) Strand=Plus/Minus Query 158462 CTCTACCCCCAGGATGTTATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACT 158521 |||| || | || || |||||| | || || || ||||| || ||||||| || |||| Sbjct 788468 CTCTTCCTTCTGGGTGCTATGGGAGAGTAGCTCCACGTTCTGGCTTGGCTGCAAAACACT 788409 Query 158522 GTATCAACGTTGGTGCGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTC 158581 || | || || || || ||||| ||| ||||||| ||| || ||||| | Sbjct 788408 TCATAGATGTAGGAGCTGGTGTCATAGATGAAGATTATAGAGGAAGTGTTGGTGTCGTAC 788349 Query 158582 TCTTCAATCATGG---AGACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGC 158638 | || ||| ||| ||| ||| || || || || ||||||||||| || ||||||| Sbjct 788348 TGTTTAATTTTGGCAAAGAAAAG---TTCGAAGTCAAAAAGGGTGATCGAATTGCACAGC 788292 Query 158639 TTGTTCTAGAAC-GTTGTGAGACGCCACCCATTGAGGAAATTAACATCGTCGAAGATACG 158697 | || |||| | | | || ||| || |||||| || | | | || || || Sbjct 788291 TCATTTGTGAACGGATATTTTAC-CCAGAAATAGAGGAAGTTCAAGTTTTAGATGACACT 788233 Query 158698 GAGAGGGGTTCGGGTGGATTTGGTTCTACTGGCAAT 158733 || |||||||| || || |||||||| | ||| ||| Sbjct 788232 GAAAGGGGTTCAGGAGGTTTTGGTTCCAGTGGAAAT 788197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588889781275800