Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq688 145 2e-29 seq2241 136 9e-27 seq6001 134 3e-26 seq7544 129 1e-24 seq1833 129 1e-24 seq2057 123 6e-23 seq11356 122 2e-22 seq379 105 1e-17 seq5560 102 2e-16 seq1036 102 2e-16 seq1478 100 6e-16 seq323 96.9 8e-15 >seq688 Length=501387 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| ||||| |||||||||||||| |||||||| ||||| || | | ||| Sbjct 311235 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGT 311294 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| || ||||| | || ||||| |||| ||| ||||| |||||||| ||||| Sbjct 311295 CCATCTTCCAGTTGCTTGTCAGCAAAGATCAGTCTTTGCTGGTCGGGAGGAATTCCTTCC 311354 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| || || || ||| ||||| || || || ||||| ||| || || || || Sbjct 311355 TTGTCCTGGATCTTGACCTTTACGTTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTG 311414 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||||||| |||| || || | ||| | ||||| Sbjct 311415 ATAGTCTTTCCCGTCAGGGTCTTCATGAAAATCTGCAT 311452 >seq2241 Length=1355799 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| ||||| |||||||||||||| |||||||| ||||| || | | | | | Sbjct 781213 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAATACGT 781272 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || || ||||| ||||| ||||| |||| ||| ||||| |||||||| ||||| Sbjct 781273 CCATCGTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 781332 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| || || || ||| || || || || ||||| ||| || || || || Sbjct 781333 TTGTCCTGGATCTTGGCCTTTACATTTTCTATTACATCCGAGGGTTCGACCTCGAGAGTG 781392 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || |||| || || ||||| | ||||| Sbjct 781393 ATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 781430 >seq6001 Length=82083 Score = 134 bits (148), Expect = 3e-26 Identities = 159/214 (74%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || |||||||| || || |||||||| | |||||| |||||||| Sbjct 45617 ACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCTTCC 45676 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || | ||| ||||| || | || ||||| || || ||||||||||| || || Sbjct 45677 AGCTGTTTGCTTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTTTCCTGG 45736 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || ||| |||||||| |||||||| ||| ||||| || ||||| | ||| Sbjct 45737 ATCTTGGCCTTCACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGTC 45793 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || || ||||| ||||| ||||| | ||| ||| Sbjct 45794 TTGCCAGTCAAGGTTTTCACGAAGATCTGCCTTT 45827 >seq7544 Length=40362 Score = 129 bits (142), Expect = 1e-24 Identities = 160/218 (73%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| ||||| ||||||||||||| |||||||| |||| || | || ||| | Sbjct 28978 AGTCTCAACACAAGACGAAGAGTGGACTCCTTTTGAATGTTGTCGTCAG-AAAAGTACAT 29036 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| || ||||| || || ||||| |||| ||| ||||| |||| ||| ||||| Sbjct 29037 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGAAATTCCTTCC 29096 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| || || || ||| || || || || || ||||| ||| || || || || Sbjct 29097 TTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTG 29156 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || ||| || | ||||| | ||||| Sbjct 29157 AGGGTCTTCCCCATCAGGGTCTCCACGAAAATCTGCAT 29194 >seq1833 Length=323201 Score = 129 bits (142), Expect = 1e-24 Identities = 146/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| | ||| |||||||||||||| |||||||| ||||| || | | ||| | Sbjct 76018 AGTCTCAACAGAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 75959 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| || ||||| || || ||||| |||| ||| |||| | |||||| |||| Sbjct 75958 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTTAGAAGGAATTACTTCC 75899 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || ||||| || || ||| || || || || || ||||| ||| || || || || Sbjct 75898 TTATCTTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTG 75839 Query 195103 ACCGTCTTTCCTGTCA 195118 | ||||| ||||||| Sbjct 75838 ATGGTCTTCCCTGTCA 75823 >seq2057 Length=292531 Score = 123 bits (136), Expect = 6e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| |||| |||||||||||||| |||||||| ||||| || | ||| | Sbjct 86992 AGTCTCAACACAATATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAAACAAAGTACGT 86933 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| || ||||| || || ||||| |||| ||| ||||| || | ||| ||||| Sbjct 86932 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGTGAAATTCCTTCC 86873 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| || | | || || | || || || || || ||| | ||| || || || || Sbjct 86872 TTGTCCTGGA-TCTTGGCCTTACATTTTCTATTGTATCCAAGGGTTCGACCTCGAGAGTG 86814 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCA 195139 | ||| ||||||||| || || ||||| | |||| Sbjct 86813 ATGGTC-TTCCTGTCAGGGTCTTCACGAAAATCTGCA 86778 >seq11356 Length=1134914 Score = 122 bits (134), Expect = 2e-22 Identities = 152/207 (73%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || |||||||| ||||| || || ||||| || | || || | |||||| || ||||| Sbjct 1059020 TGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCCAGCTGT 1059079 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || ||||| | | || |||||||| || ||||| ||||| ||||| || || Sbjct 1059080 TTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCTTTTTCTTGGATCTTC 1059139 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCCT 195114 |||||||||||| |||||||| ||| ||||| || ||||| | ||||| || Sbjct 1059140 CCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGTCTTACCA 1059196 Query 195115 GTCAAAGTTTTTACGAACACTTGCATT 195141 ||||| || || || || | |||||| Sbjct 1059197 GTCAAGGTCTTCACAAAGATCTGCATT 1059223 >seq379 Length=586137 Score = 105 bits (116), Expect = 1e-17 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| ||||| |||||||||||||| |||||| | ||| || | | ||| | Sbjct 190712 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAGTGCTGTGGTCAGACAAAGTACAT 190653 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| || ||||| | || ||||| |||| ||| ||||| |||||||| |||| Sbjct 190652 CCATCTTCCAGTTGCTTGTCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTGCTTCC 190593 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || || || || || ||| || || || || || || || ||| || || || || Sbjct 190592 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCGACCTCGAGAGTG 190533 Query 195103 ACCGTCTT 195110 | ||||| Sbjct 190532 ATGGTCTT 190525 >seq5560 Length=95284 Score = 102 bits (112), Expect = 2e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || |||||||| || || ||||||| | |||||| | |||||||| Sbjct 18250 ACCAGGTGCAGGGTCGACTCTTTCTGGATGCTGTAATCAGAAAGAGTGCGGCCATCTTCC 18309 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || ||||| ||||| || | || || || ||| | ||||||||||| || | Sbjct 18310 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGATCAGGAAGGATGCCTTCTTTATCCTCG 18369 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || || ||| |||||||| ||||||| Sbjct 18370 ATCTTGGCCTTCACGTTCTCGGTGGTGTC 18398 >seq1036 Length=435897 Score = 102 bits (112), Expect = 2e-16 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||| ||| ||||| |||||||||||||| |||||||| ||| | || | | ||| | Sbjct 183701 AGTCACAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGCAGTCAGACAAAGTACAT 183760 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || | ||||| | || ||||| |||| ||| ||||| |||||| | ||||| Sbjct 183761 CCATCCTCCAATTGCTTGACAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAGTTCCTTCC 183820 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGA 195083 || || || || || ||| || || || || || ||||| Sbjct 183821 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGA 183861 >seq1478 Length=366608 Score = 100 bits (110), Expect = 6e-16 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || |||||||| || || |||||||| | || ||| | || |||| Sbjct 273084 ACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAATAGTGCGGCCGTCTTAC 273025 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || ||||| ||||| || | || ||||| | || ||||||||||| || || Sbjct 273024 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGCGGGCATGCCTTCTTTATCCTGG 272965 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 | || ||| || |||| |||||||| ||| ||||| || ||||| | ||| Sbjct 272964 GTCTTGGCCTTCACATTCTTGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGTC 272908 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||| || || |||| | ||||| Sbjct 272907 TTGCCCGTCAGGGTCTTCCCGAAGATCTGCAT 272876 >seq323 Length=596616 Score = 96.9 bits (106), Expect = 8e-15 Identities = 146/206 (71%), Gaps = 5/206 (2%) Strand=Plus/Plus Query 194934 AAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAG 194993 ||| |||||||||||||| |||||||| ||||| || | ||| | |||||||| || Sbjct 311055 AAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACGTCCATCTTCCAG 311110 Query 194994 CTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAAT 195053 ||||| || |||||||| |||| ||| | ||| |||||||| | ||| || || || | Sbjct 311111 TTGCTTGCCAGCGAAGATTAGTCTTTGCTTGTCAGGAGGAATTCTTTCCTTTTCCTGGGT 311170 Query 195054 TTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCC 195113 || ||| || || | | || || || ||| |||||||| || | ||| | || Sbjct 311171 CTTGGCCTTTACATTTTTTGTTGTATCTGAGGGTTCAACTTCAAGAGTGATGGTCATCCC 311230 Query 195114 TGTCAAAGTTTTTACGAACACTTGCA 195139 | || ||||| | ||| | |||| Sbjct 311231 CG-GAAGGTTTTCATGAAAATCTGCA 311255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109315125406337