Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_016447.1 Length=219474 Score E Sequences producing significant alignments: (Bits) Value seq4748 98.7 1e-15 >seq4748 Length=126695 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 197419 ACAGATATTGAGAACGTGGCTTGGAACGGCCCTAAAATCGCTTTAGCATTTGCCAATCCT 197478 ||||| |||||| || | || |||| || || || | ||||| || || || || | Sbjct 92998 ACAGAAATTGAGCACATCGCCTGGAGTGGTCCCCAAGTAGCTTTGGCTTTAGCAGATGCA 92939 Query 197479 AAAG---ACGTTACCATAATGGATAAAAGCTACCAGGGTCGTGTCAACATTAGCCAAACC 197535 | || | ||| | | | || |||||||||||||| || | ||| | | ||| Sbjct 92938 AGAGGAAAGATTATCTTTTTAGACAAAAGCTACCAGGGGCGAATAAACGTCACCCA---G 92882 Query 197536 AACTACTCTTTGTGCATTAGGAACCTGACCGTGAATGATGCTGGTTCGTATAAGGCCCAA 197595 ||| |||| |||| || | || ||||| |||| ||||| || || || || ||||| Sbjct 92881 AACAACTCCTTGTCTATCAACAAGCTGACTCTGAAAGATGCAGGATCCTACAAAGCCCAG 92822 Query 197596 ATTAACAAAAATAATTCCCAAGTCACCACCAAGGAGGAATTTACTCTGTCT 197646 || ||| |||| ||||| |||||||||| | ||| |||| || |||||| Sbjct 92821 ATAAACCAAAAGAATTCTGAAGTCACCACAAGTGAGAAATTCACCCTGTCT 92771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 702086008337040