Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq2241 87.8 1e-12 >seq2241 Length=1355799 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 |||||| | ||| || ||| ||| |||||||| ||||| ||||| | | | || | || Sbjct 781218 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAATACGTCCATC 781277 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||| ||||| || ||||| ||||||| || || || | |||| || |||||||| Sbjct 781278 GTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTGTC 781337 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||||| |||||| | | || || | || ||||| | || || || Sbjct 781338 CTGGATCTTGGCCTTTACATTTTCTATTACATCCGAGGGTTCGACCTCGAGAGTGATGGT 781397 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||||| || || || ||||||||||| Sbjct 781398 CTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 781430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380883229609653