Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq341 174 3e-38 seq11472 154 3e-32 seq2652 150 3e-31 seq2631 125 1e-23 seq11614 93.3 8e-14 seq2642 86.0 1e-11 >seq341 Length=589206 Score = 174 bits (192), Expect = 3e-38 Identities = 182/239 (76%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 241389 GCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCC 241448 |||| ||||| | || | ||| || ||||| ||||||||| ||||||||||| || | Sbjct 179593 GCTGGCAGCCGTTGCTGACGTGGGTCATGACCTTCTGTTTGAGCTGGGCCACCTGCTCGC 179534 Query 241449 GCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCT 241508 | || | | || || ||||||| || ||||| || | |||||| |||||| || | Sbjct 179533 GGAGGAGGCCGGCAGTGCTGGACAGCCCCGCGTTCTCGGCCTTGAGTGTCTTCACCTTGT 179474 Query 241509 CCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGT 241568 ||||||| ||||||||||| ||||| || ||| ||||| |||||||| |||| |||| Sbjct 179473 CCTCCAGGCGCGCGATGCGCTCCAGCTTCCGCTTCCGGCACTTGGTGGCCGCCAGCCGGT 179414 Query 241569 TCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 |||| || | ||| || || | |||||||| |||||||| ||||||| ||| || ||| Sbjct 179413 TCCGCAGCCGCTTGCGCTCTACTTTGATGCGCTCCTGGTCTTCCATGTTGATGGGGGAC 179355 >seq11472 Length=944226 Score = 154 bits (170), Expect = 3e-32 Identities = 543/842 (64%), Gaps = 17/842 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||| || || || ||||| |||||| ||||||| |||||||| |||| || || ||||| Sbjct 784067 CTGATACTCGCCTACTCTCTTCTCAGAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTC 784126 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTAT-ACACCCGTGTCAGGCCCATCTGTTCCAGCA 47957 ||| ||| | || || | | | | | | || || || || | | |||||| Sbjct 784127 CATAAAGTCAAGTGGATTT--TCTACTCTGAAAACCTTGCCAACACC--CAGCCCCAGCA 784182 Query 47958 GGTGA---TCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGA 48014 | || || ||| | |||||||| | ||| || | | |||||| || ||| Sbjct 784183 TAAGTCTGTCTGCCACGAATTCGATGTACTGCTTCATCAGAGCGCAGTTCATCCCAATGG 784242 Query 48015 GGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074 | ||| ||| |||| ||||| | ||||| |||||| || || | | | Sbjct 784243 GCTTCACTGGCGGGGCCTCCGTGAGGAGCTCCTGTTCTATCCTAACCGCACTGACGATTA 784302 Query 48075 TCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134 | || || | ||| || ||||||| ||||||| | | | | || ||||| Sbjct 784303 TTCCTTTGACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTCGA---ACATCAGGCAGG 784359 Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 ||||||| | ||| || || ||||| | ||| || || ||||||| || ||| || | Sbjct 784360 CAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCGG 784419 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 |||| | || | | |||||||||||| || | || ||||| ||||| ||||||| | Sbjct 784420 GCATCAGTCCTCGTTTTTTGAGCCAGAACATCGATGCAAAAGAACCAGAAGAGAAGATTC 784479 Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314 | |||||||| || || || | || | |||||| | | ||| | ||||| ||||| Sbjct 784480 CTTCCACTGCGGCAAAGGCTGCGACACGTTCTCCGTACGTAGCCTCTTTGTCCCCGATCC 784539 Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA 48374 | | ||||| |||||||||||||| | || ||||| ||||| ||||| ||||| Sbjct 784540 GGCGCACGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCGATGGCATTGAAGA 784599 Query 48375 GCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCT 48431 | | | || | | || || | || | ||| || | ||||| | Sbjct 784600 GAAATTCCCTTTCTCTGGAATCTTTAATGTGAGTGTCAACGAGGAGACT---CTACATTT 784656 Query 48432 CAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCT 48491 |||| || || || | || || ||||| |||||||| | ||| || | || Sbjct 784657 CAGAATGTGTGTTTTCCACGGCAATTTGGAAGCCGTAGAAACAACGGGCTTCTGTAATCT 784716 Query 48492 GCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAA 48551 | |||||| | || | ||||| || || ||||| ||||| ||||| || ||| Sbjct 784717 GAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCCGCAG 784776 Query 48552 AGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCT 48611 |||| || || ||||| | ||||| | ||| | | | || || | || | || Sbjct 784777 AGAAAGCCAGAACATGCGAAGTGAAATATCTCTCCTCAGGCTTCAGGGCTTCCCGGTGCT 784836 Query 48612 GTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGT 48671 | | ||| ||| |||||||| || || | ||||| ||||| || ||||| || | Sbjct 784837 GAATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTCT 784896 Query 48672 AC 48673 || Sbjct 784897 AC 784898 >seq2652 Length=2380422 Score = 150 bits (166), Expect = 3e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 ||||||| ||| ||||| || |||||||| || ||||| | | ||| || | ||| Sbjct 1186477 AGGACCTTCTGCTTGAGCTGCGCCACCTGCTCGCGCAGCAGGCTCGCCGTGGACGCCAGC 1186536 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | | ||||||| ||||||||||||||| || |||| |||||| ||||| Sbjct 1186537 TCCGTGTTCTGACTCTTGAGCGTCTTCACTTTCTCCTCGAGGCGCGAGATGCGCTCCAGC 1186596 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 |||||| |||||| |||| ||| || | |||||| || || | ||| || |||||||| Sbjct 1186597 TTGCGCTTGCGGCACTTGGAGGCAGCGATGCGGTTGCGCAGCCGCTTGCGCTCCGCCTTA 1186656 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 ||||| ||||| ||||||||||| || ||| Sbjct 1186657 ATGCGCTCCTGCGTGTCCATGTCGATGGGCGAC 1186689 >seq2631 Length=239737 Score = 125 bits (138), Expect = 1e-23 Identities = 540/843 (64%), Gaps = 23/843 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||| || || || ||||| |||||| ||||||| |||||||| |||| || || ||||| Sbjct 171509 CTGATACTCGCCTACTCTCTTCTCAGAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTC 171450 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTAT-ACACCCGTGTCAGGCCCATCTGTTCCAGCA 47957 ||| ||| | || || | | | | | | || || || || | | ||||||| Sbjct 171449 CATAAAGTCAAGTGGATTT--TCTACTCTGAAAACCTTGCCAACACC--CAGCTCCAGCA 171394 Query 47958 GGTGA---TCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGA 48014 | || || ||| | |||||||| | ||| || | | |||||| || ||| Sbjct 171393 TAAGTCTGTCTGCCACGAATTCGATGTACTGCTTCATCAGAGCGCAGTTCATCCCAATGG 171334 Query 48015 GGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074 | ||| ||| |||| ||||| | ||||| ||||| || || | | | | Sbjct 171333 GCTTCACTGGCGGGGCCTCCGTGAGGAGCTCCTGTTCTATGCTAACCGCGTTGACGATTA 171274 Query 48075 TCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134 | || || | ||| || ||||||| ||||||| | | | | | ||||| Sbjct 171273 TTCCTTTGACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTCGA---ACATCGGGCAGG 171217 Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 ||||||| | ||| || || ||||| | ||| || || | ||||| || ||| || | Sbjct 171216 CAAAGTCACAGTGTAAACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGG 171157 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 |||| | || | | |||||||||||| || | || ||||| ||||| ||||||| | Sbjct 171156 GCATCAGTCCTCGTTTTTTGAGCCAGAACATCGATGCAAAAGAACCAGAAGAGAAGATTC 171097 Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314 | |||||||| || || || | || | |||||| | | ||| | ||||| ||||| Sbjct 171096 CTTCCACTGCGGCAAAGGCTGCGACACGTTCTCCGTACGTAGCCTCTTTGTCCCCGATCC 171037 Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA 48374 | | ||||| |||| |||||| | || ||||| ||||| ||| | ||||| Sbjct 171036 GGCGCACGGCCCAATCTG---GCTTCTTTACACA-GGCATTGTCTCGATGACATTGAAGA 170981 Query 48375 GCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCT 48431 | | | || | | || || | || | ||| || | ||||| | Sbjct 170980 GAAATTCCCTTTCTCTGGAATCTTTAATGTGAGTGTCAACGAGGAGACT---CTACATTT 170924 Query 48432 CAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCT 48491 |||| || || || | || || ||||| |||||||| | ||| || | || Sbjct 170923 CAGAATGTGTGTTTTCCACGGCAATTTGGAAGCCGTAGAAACAACGGGCTTCTGTAATCT 170864 Query 48492 GCACTTCTGTGGAGAA-TCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550 | |||||| ||| || | ||||| || || ||||| ||||| ||||| || ||| Sbjct 170863 GAACTTCT-TGGCTAAGCCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCA 170805 Query 48551 AAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCC 48610 |||| || || |||||| | ||||| | || | | | || || | || | | Sbjct 170804 GAGAAAGCCAGAACATGTGAAGTGAAATATCTCTTCTCAGGCTTCAGGGCTTCCCGGTGC 170745 Query 48611 TGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTG 48670 || | ||| ||| |||||||| || || | ||||||||||| || ||||| || Sbjct 170744 TGAATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAGAAGGAAGCCTCAGCTTTCTTA 170685 Query 48671 TAC 48673 ||| Sbjct 170684 TAC 170682 >seq11614 Length=797556 Score = 93.3 bits (102), Expect = 8e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 241499 TTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCT 241558 |||||||| ||||||||||| ||||| | ||||| || | ||||| |||| ||| Sbjct 632378 TTCACTTTTTCCTCCAGCCGGGCGATTCTCTCCAGCTTCCTTTTCCGGCACTTGGAGGCA 632319 Query 241559 GCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCG 241618 || | |||||||| | | ||| | ||||||||||| || |||||| |||||||||| Sbjct 632318 GCGATGCGGTTCCTCATGCGCTTCCTCTCCGCCTTGATCCGCTCCTGGGACTCCATGTCG 632259 Query 241619 ATCGGAGAC 241627 || || ||| Sbjct 632258 ATGGGGGAC 632250 >seq2642 Length=239306 Score = 86.0 bits (94), Expect = 1e-11 Identities = 95/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587 || ||||| | || || |||||||||||||||||| ||| || || |||||||| ||| Sbjct 96804 GTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCTAGGTTCTGCTGG 96745 Query 213588 TTTGACTTTGCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTG 213646 ||| || || | || ||||| |||||||||||||| |||| || |||||| ||| Sbjct 96744 -TTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACCTGTCTCTGTCTG 96686 Query 213647 GGAC 213650 ||| Sbjct 96685 AGAC 96682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931396435242240