Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq11472 127 4e-24 seq2631 107 4e-18 seq6223 87.8 3e-12 >seq11472 Length=944226 Score = 127 bits (140), Expect = 4e-24 Identities = 320/475 (67%), Gaps = 21/475 (4%) Strand=Plus/Minus Query 25601 TGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCA 25660 |||| |||| ||| || |||||| ||||| || || || || ||| | || | | Sbjct 784785 TGGCTTTCTCTGCGGCAAGTGATGGCATAGTAAATGAAAACTTGGTGGAGCGGTTTAGCC 784726 Query 25661 GGGAAGTGCAG--TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAA 25718 ||||| ||| ||| || ||| ||||||||||| ||||| || ||| | ||||| Sbjct 784725 AAGAAGTTCAGATTACA--GAAGCCCGTTGTTTCTACGGCTTCCAAATTGCCGTGGAAAA 784668 Query 25719 TGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGT--ACATTACAGACGTCGCCGA 25775 || ||||| |||| | || || | |||| |||||| ||| | || Sbjct 784667 CACACATTCTGAAATGTAG---AGTCTCCTCGTTGACACTCACATTAAAGATTCCAGAGA 784611 Query 25776 GAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTG 25835 || || || || |||||||||| || || | | |||| |||||| || Sbjct 784610 AAGGGAATTTCTCTTCAATGCCATCGAGACAATGCCTTGTGTAAAGAAGAAGGCAGATTG 784551 Query 25836 GGCCATGAAGTGGATCA---ACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTT 25892 |||| || ||||| ||| |||| ||||||| || || || | | |||||| Sbjct 784550 GGCCGTGCGCCGGATCGGGGACAA--AGAG-GCTACGTACGGAGAACGTGTCGCAGCCTT 784494 Query 25893 TGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCA 25952 ||| || ||||| || ||||| | ||||| ||||| | || ||||||||||| | Sbjct 784493 TGCCGCAGTGGAAGGAATCTTCTCTTCTGGTTCTTTTGCATCGATGTTCTGGCTCAAAAA 784434 Query 25953 GAAGGGGACC-ATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTC 26011 | | |||| |||||||| || ||||||||||| || || ||||| ||||||||| Sbjct 784433 -ACGAGGACTGATGCCCGGCCTCACATTTTCCAACGAACTTATTAGCAGAGACGAGGGTT 784375 Query 26012 TCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTC 26066 | ||| | || |||||||||||| | | | | ||| |||| ||||||||||| Sbjct 784374 TACACTGTGACTTTGCCTGCCTGATGTTC---GAACACCTGCTACACAAACCTTC 784323 >seq2631 Length=239737 Score = 107 bits (118), Expect = 4e-18 Identities = 152/209 (73%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 25859 AGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCA 25918 |||| ||||||| || || || | | ||||||||| || ||||| || ||||| | Sbjct 171050 AGAG-GCTACGTACGGAGAACGTGTCGCAGCCTTTGCCGCAGTGGAAGGAATCTTCTCTT 171108 Query 25919 GCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTAC 25977 ||||| ||||| | || ||||||||||| | | | |||| |||||||| || Sbjct 171109 CTGGTTCTTTTGCATCGATGTTCTGGCTCAA-AAAACGAGGACTGATGCCCGGCCTCACA 171167 Query 25978 TTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTC 26037 |||||||| || || || ||||| ||||||||| | ||| | || |||||||||| | | Sbjct 171168 TTTTCCAATGAACTTATTAGCAGAGACGAGGGTTTACACTGTGACTTTGCCTGCCCGATG 171227 Query 26038 TACACGGGCCACTTGCTCCACAAACCTTC 26066 | | | ||| |||| ||||||||||| Sbjct 171228 TTC---GAACACCTGCTACACAAACCTTC 171253 >seq6223 Length=75078 Score = 87.8 bits (96), Expect = 3e-12 Identities = 100/129 (78%), Gaps = 4/129 (3%) Strand=Plus/Plus Query 25880 GGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCT 25939 || |||| |||||||||||||| || || || || ||| || || ||||| || || | Sbjct 21774 GGGTGGTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCGGGATCTTTTGCTGCTATAT 21833 Query 25940 TCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTAC-TTTTCCAACGAGCTCATCAG 25997 ||||||| ||| | ||| |||| ||||| || || ||| |||||||| || |||||||| Sbjct 21834 TCTGGCTAAAG-AAAAGAGGACTTATGCCTGGACT-TACTTTTTCCAATGAACTCATCAG 21891 Query 25998 CAGGGACGA 26006 ||| || || Sbjct 21892 CAGAGATGA 21900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928708828731840