Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq688 136 4e-27 seq11356 131 2e-25 seq2241 114 1e-20 seq11454 109 5e-19 seq1833 107 2e-18 seq7544 98.7 9e-16 seq2057 96.9 3e-15 seq1010 91.5 1e-13 seq1036 89.7 5e-13 >seq688 Length=501387 Score = 136 bits (150), Expect = 4e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || || || || || || || || ||||| || ||||| || ||| || | Sbjct 311452 ATGCAGATTTTCATGAAGACCCTGACGGGAAAGACTATCACTCTCGAGGTCGAACCCTCG 311393 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||||| ||||| |||||||| ||||| |||||||| |||||||| || Sbjct 311392 GATACAATAGAAAACGTAAAGGTCAAGATCCAGGACAAGGAAGGAATTCCTCCCGACCAG 311333 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTATAA 24882 ||| | |||||||||| | || || ||||| ||| || | || | ||| || || || Sbjct 311332 CAAAGACTGATCTTTGCTGACAAGCAACTGGAAGATG-GACATACTTTGTCTGACTACAA 311274 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 |||||||||||| || || || || | |||||| || Sbjct 311273 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGA 311237 >seq11356 Length=1134914 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||||||| | || || | || ||||| || || || || || || || || Sbjct 1059225 ACAATGCAGATCTTTGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAGGTGGAGCCC 1059166 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | || || ||||||||||| ||||| || || || || || Sbjct 1059165 AGTGACACCATCGAGAACGTCAAGGGGAAGATCCAAGAAAAAGAGGGCATCCCCCCAGAC 1059106 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || | |||||||||||||||||||||||||||||| | | | | |||| || || Sbjct 1059105 CAGCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCTGACTAC 1059046 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || || ||||| || || || ||||| |||| ||| ||||| Sbjct 1059045 AACATCCAGAAAGAATCCACTCTGCATTTGGTCCTGCGCTTGAAGGGAGG 1058996 >seq2241 Length=1355799 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || || || || || || || ||||| || ||| || | Sbjct 781430 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTCG 781371 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || | |||||| ||||| |||||||| ||||| |||||||| ||||| || || Sbjct 781370 GATGTAATAGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAG 781311 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | |||||||||| || || || ||||| ||| | | |||| || || ||| Sbjct 781310 CAAAGACTGATCTTTGCAGGCAAGCAACTGGACGATGGACGTATTTTGTCTGACTACAAC 781251 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 ||||||||||| || || || || | |||||| || Sbjct 781250 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGA 781215 >seq11454 Length=977069 Score = 109 bits (120), Expect = 5e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || || || || || || || || || || || ||| | || ||| | | Sbjct 83041 GATGCAGATTTTCATGAAGACCCTGACAGGGAAGACCATCACTCTCAAGGTTGAACCTTC 82982 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| ||||| ||||| || || ||||||||||| ||||| || || Sbjct 82981 AGATACAATAGAAAATGTAAAGACCAAGATGCAGGATAAAGAAGGAATCCCTCCTGACCA 82922 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC-ATGTCAGATTATA 24881 ||| | |||||||||| || || || |||||||| | | | || ||| || || | Sbjct 82921 GCAAAGACTGATCTTTGCTGGCAAGCAACTGGAGGA-TGGCCATACTTTGTATGACTACA 82863 Query 24882 ACATTCAAAAGGAATCGAC 24900 ||||||||||||| || || Sbjct 82862 ACATTCAAAAGGAGTCCAC 82844 >seq1833 Length=323201 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | || | || || || || || || || ||||| || ||| || | Sbjct 75800 GATGCAGATTTTTGTGAAGATCCTGACAGGGAAGACCATCACTCTCGAGGTCGAACCCTC 75859 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| ||||| ||||||||||| || |||| ||| ||| | | || Sbjct 75860 GGATACAATAGAAAATGTAAAGGCCAAGATCCAAGATAAGGAAGTAATTCCTTCTAACCA 75919 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||||||||| || || || ||||| ||| | | |||| || || || Sbjct 75920 GCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 75979 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 |||||||||||| || || || || | ||||| || Sbjct 75980 CATTCAAAAGGAGTCCACTCTTCATCTTCTGTTGAGA 76016 >seq7544 Length=40362 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/229 (70%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | | || || | || || || | || ||||| || ||| || | Sbjct 29194 ATGCAGATTTTCGTGGAGACCCTGATGGGGAAGACCCTCACTCTCGAGGTTGAACCCTCG 29135 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||||| ||||| |||||||| ||||| |||||||| |||| || || Sbjct 29134 GATACAATAGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTTCTCCTGACCAG 29075 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | |||||||||| || || || ||||| ||| || || | || || | ||| Sbjct 29074 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATG-GATGTACTTTTCTGACGACAAC 29016 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 ||||||||||| || || || | | |||||| || | | || |||| Sbjct 29015 ATTCAAAAGGAGTCCACTCTTCGTCTTGTGTTGAGACTTTGTGGTGGCG 28967 >seq2057 Length=292531 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/215 (71%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 ||||||| || | || || || || || || || || || ||||| || ||| || | Sbjct 86778 TGCAGATTTTCGTGAAGACCCTGACAGG-AAGACCATCACTCTCGAGGTCGAACCCTTGG 86836 Query 24765 ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 | ||| |||||| |||| | || |||||| ||||| |||||||| | || || || | Sbjct 86837 ATACAATAGAAAATGTAAGGCCAA-GATCCAGGACAAGGAAGGAATTTCACCTGACCAGC 86895 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884 || | |||||||||| || || || ||||| ||| | | ||| || || |||| Sbjct 86896 AAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTTTGACTACAACA 86955 Query 24885 TTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 |||||||||| || || || || | |||||| || Sbjct 86956 TTCAAAAGGAGTCCACTCTTCATATTGTGTTGAGA 86990 >seq1010 Length=438066 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || || || | | || || ||||| || ||| || | Sbjct 115025 ATGCAGATTTTCGTGAAGACCCTGACAGGGATGGCCATCACTCTCGAGGTTGAACCCTCA 115084 Query 24764 GACACAGTAGAAACG-GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| ||||| |||| ||| ||||| |||||||| ||||| || || Sbjct 115085 GATACAATAGAAAAATGTAAAGGCCAAGAGCCAGGACAAGGAAGGAATTCCTCCTGACCA 115144 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||||||||| || || || ||| | ||| | | || | || || || Sbjct 115145 GCAAAGACTGATCTTTGCTGGCAAGCAACTGAAAGATGGACGTACTTTGGCTGACTACAA 115204 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910 |||||||||||| || || || || |||| Sbjct 115205 CATTCAAAAGGAGTCTACTCTTCATCTTG 115233 >seq1036 Length=435897 Score = 89.7 bits (98), Expect = 5e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTC--GAAGTAGAAGCC 24760 ||||||||| || || || || || || || || || || ||| || || || || Sbjct 183919 GATGCAGATTTTCATGAAGACCG--ACGGGGAAGACCATCACTCTCTCGAGGTCAAACCC 183862 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | || ||| |||||| ||||| |||||||| || || ||||||| ||||| || Sbjct 183861 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAACTCCTCCTGAC 183802 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || ||| | |||||||||| | || || |||||||| | | |||| || | Sbjct 183801 CAGCAAAGACTGATCTTTGCTGTCAAGCAATTGGAGGATGGATGTACTTTGTCTGACTGC 183742 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||||||| || || || || | |||||| || | || || || Sbjct 183741 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGTGACTTCGTGGTGG 183692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449831740615080