Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq6001 82.4 6e-11 >seq6001 Length=82083 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/229 (68%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 |||| ||| || || || ||||| || || ||||| ||||| ||| | || |||||| Sbjct 45828 AAAAGGCAGATCTTCGTGAAAACCTTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCC 45769 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 || || ||| | || || ||||| || ||||||||| | ||| || Sbjct 45768 AGTGACACCATCGAGAACGTGAAGGCCAAGATCCAGGAAAAAGAAGGCATCCCCCCTGAC 45709 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || || || || | ||| | ||||||||||| |||| | || | | |||||| Sbjct 45708 CAGCAGAGGCTCATCTTTGCAAGCAAACAGCTGGAAGATGGCCACACTCTTTCTGATTAC 45649 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGG 110498 ||||| || ||||| ||||| ||||| |||| || | || |||||| Sbjct 45648 AACATCCAGAAAGAGTCTACCCTGCACCTGGTCCTATGTCT--GAGGGG 45602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412782676021523