Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq11356 131 1e-25 seq2241 113 3e-20 seq8558 107 1e-18 seq688 105 4e-18 seq1561 96.9 2e-15 seq3070 89.7 3e-13 seq2057 87.8 1e-12 seq6001 82.4 5e-11 >seq11356 Length=1134914 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||| |||| | |||||||| || | ||| || ||||| ||||| ||||| || Sbjct 1058996 CCTCCCTTCAAGCGCAGGACCAAATGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGAC 1059055 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| ||||| |||| ||||| || || ||||| ||||||| | ||||||||| | || Sbjct 1059056 AGGGTGCGCCCATCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGG 1059115 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||| || || | || || |||||| | || | ||| ||| ||| || Sbjct 1059116 ATGCCCTCTTTTTCTTGGATCTTCCCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 1059175 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| |||||||| || || | |||||| |||||||||||||| Sbjct 1059176 TCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 1059222 >seq2241 Length=1355799 Score = 113 bits (124), Expect = 3e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 |||| || || |||| ||| |||||| |||||||| ||||| || | | || || Sbjct 781216 CTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAATACGTCCA 781275 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 |||||||||||||| || || |||||||||| ||||||||| | || | || |||||| Sbjct 781276 TCGTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTG 781335 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || || || | |||| || || ||||| || | || ||| Sbjct 781336 TCCTGGATCTTGGCCTTTACATTTTCTATTACATCCGAGGGTTCGACCTCGAGAGTGATG 781395 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| |||||||| || || |||||||| Sbjct 781396 GTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 781430 >seq8558 Length=1191863 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||||| | ||| ||| ||||| ||||| || || || Sbjct 300040 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAA 299981 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| ||||| || || ||||| || | |||||||| | || Sbjct 299980 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 299921 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || ||||| || | || || || ||| | || | ||| ||| ||| || Sbjct 299920 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 299861 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| |||||||| || || |||||||| || || |||||||| Sbjct 299860 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCAT 299814 >seq688 Length=501387 Score = 105 bits (116), Expect = 4e-18 Identities = 157/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 |||| || || |||| ||| |||||| |||||||| ||||| || | | | || Sbjct 311238 CTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCA 311297 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || ||||||||||| | || |||||||||| ||||||||| | || | || |||||| Sbjct 311298 TCTTCCAGTTGCTTGTCAGCAAAGATCAGTCTTTGCTGGTCGGGAGGAATTCCTTCCTTG 311357 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || || ||| | |||| | || || ||||| || | || || Sbjct 311358 TCCTGGATCTTGACCTTTACGTTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTGATA 311417 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGATAGTGG 34985 ||||||||||| |||||||| | || |||||||| | |||| Sbjct 311418 GTCTTTCCCGTCAGGGTCTTCATGAAAATCTGCATATTGGTGG 311460 >seq1561 Length=353970 Score = 96.9 bits (106), Expect = 2e-15 Identities = 159/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||||| | ||| ||| |||| |||||||| || || Sbjct 203123 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCAACTCTCTCTGGATGTTATAATCAGAA 203064 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC-TTGCGG 34869 || |||| |||| ||||| || || || || ||||| || | |||||||| | || Sbjct 203063 AGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 203004 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929 | || ||||| || | || || || ||| | || | ||| ||| ||| || Sbjct 203003 GATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGCGTCACTGGGCTCCAC 202944 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| |||||||| || || | |||||| || ||||||||||| Sbjct 202943 CTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 202896 >seq3070 Length=217634 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | ||| ||| ||||| ||||| || || || || |||| |||| Sbjct 177708 AGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 177767 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || || || ||||| || | |||||||| | | | || ||||| || Sbjct 177768 TCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAAGGAGGATGCCTTCCTTATCC 177827 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | ||| ||| ||| || || | ||| | |||| Sbjct 177828 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGACTCCACCTCCAGGGTGACGGTC 177887 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||| | || ||||||||||| Sbjct 177888 TTGCCAGTCAGGGTCGTCACGAAGATCTGCAT 177919 >seq2057 Length=292531 Score = 87.8 bits (96), Expect = 1e-12 Identities = 142/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 34775 TGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGC 34834 |||| ||| |||||| |||||||| ||||| | | | || |||| ||||||||| Sbjct 86977 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAAACAAAGTACGTCCATCTTCCAGTTGC 86918 Query 34835 TTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTT 34894 || || || |||||||||| ||||||||| | | | || |||||||| | | | || Sbjct 86917 TTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGTGAAATTCCTTCCTTGTCCTGGA-TCTT 86859 Query 34895 TGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTG 34954 | | || | |||| | || || ||||| || | || |||||| |||| || Sbjct 86858 GGCCTTACATTTTCTATTGTATCCAAGGGTTCGACCTCGAGAGTGATGGTC-TTCCTGTC 86800 Query 34955 AGGGTCTTTACAAAGATCTGCA 34976 |||||||| || || ||||||| Sbjct 86799 AGGGTCTTCACGAAAATCTGCA 86778 >seq6001 Length=82083 Score = 82.4 bits (90), Expect = 5e-11 Identities = 153/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||||| | ||| ||| ||||| ||||| || || || Sbjct 45599 CCACCCCTCAGACATAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAA 45658 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || || | |||| ||||| || || | || ||||| || | |||||||| | || Sbjct 45659 AGAGTGTGGCCATCTTCCAGCTGTTTGCTTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 45718 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || || || || | || || || ||| | || | ||| ||| ||| || Sbjct 45719 ATGCCTTCTTTTTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 45778 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGC 34975 || | ||| |||||||| || || | ||| || || ||||||||| Sbjct 45779 TCCAGGGTGATGGTCTTGCCAGTCAAGGTTTTCACGAAGATCTGC 45823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325646314579109