Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq11356 116 2e-21 >seq11356 Length=1134914 Score = 116 bits (128), Expect = 2e-21 Identities = 167/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||| || |||| || | |||||||| |||||| ||||| || |||||||| || | Sbjct 1058994 CACCTCCCTTCAAGCGCAGGACCAAATGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAG 1059053 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | || ||||| | || |||| ||||| |||||||| ||||| | |||||| ||| | | Sbjct 1059054 ACAGGGTGCGCCCATCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGG 1059113 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | || ||||| || || ||| || | | | || | |||||| || | ||| Sbjct 1059114 GGATGCCCTCTTTTTCTTGGATCTTCCCCTTGA-CGTTCTCGATGGTGTCACTGGGCTCC 1059172 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 || || | ||||| || ||||| || || || || |||||||||||||| || Sbjct 1059173 ACCTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCATTGT 1059225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328657084797120