Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq688 127 5e-24 seq1833 123 6e-23 seq2057 120 7e-22 seq1010 120 7e-22 seq7544 109 1e-18 seq379 104 6e-17 seq323 98.7 2e-15 seq8558 89.7 1e-12 seq6001 89.7 1e-12 seq11454 86.0 1e-11 seq3070 86.0 1e-11 >seq688 Length=501387 Score = 127 bits (140), Expect = 5e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || ||||| || |||||| | || || ||| || || ||| | ||| Sbjct 311437 AAGACCCTGACGGGAAAGACTATCACTCTCGAGGTCGAACCCTCGGATACAATAGAAAAC 311378 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| || || || ||||||||| || ||| |||||||| ||||| Sbjct 311377 GTAAAGGTCAAGATCCAGGACAAGGAAGGAATTCCTCCCGACCAGCAAAGACTGATCTTT 311318 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || | ||||| ||||||||||| |||||| | || |||||| | || || ||||| Sbjct 311317 GCTGACAAGCAACTGGAAGATGGACATACTTTGTCTGACTACAACATTCAAAAGGAGTCC 311258 Query 206365 ACTCTTCACCTTGTTTTGAGACTTC 206389 |||||||| ||||| |||||||||| Sbjct 311257 ACTCTTCATCTTGTGTTGAGACTTC 311233 Score = 87.8 bits (96), Expect = 4e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 204753 GAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCC 204812 |||||||||| ||||| |||||||| ||||| || || | || ||||||| |||||| Sbjct 311233 GAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAT 311292 Query 204813 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||||||| ||||| | || ||||| || | ||| || Sbjct 311293 GTCCATCTTCCAGTTGCTTGTCAGCAAAGATCAGTCTTTGCTG 311335 >seq1833 Length=323201 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || | || ||||| || || |||||| | || || ||| || || Sbjct 75804 CAGATTTTTGTGAAGATCCTGACAGGGAAGACCATCACTCTCGAGGTCGAACCCTCGGAT 75863 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | ||| |||||| ||||| ||||| || |||| |||| | || ||| Sbjct 75864 ACAATAGAAAATGTAAAGGCCAAGATCCAAGATAAGGAAGTAATTCCTTCTAACCAGCAA 75923 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||| ||||| || || ||||| ||||||||||| | |||||| | || |||||| | Sbjct 75924 AGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATT 75983 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || || ||||| |||||||| ||| | ||||||||||| Sbjct 75984 CAAAAGGAGTCCACTCTTCATCTTCTGTTGAGACTTCG 76021 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||||| | ||| |||||||| ||||| || || | || ||||||| |||||| Sbjct 76021 CGAAGTCTCAACAGAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 75962 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | |||||||||||| ||||| || || ||||| || | ||| || Sbjct 75961 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTG 75918 >seq2057 Length=292531 Score = 120 bits (132), Expect = 7e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || ||||||| | | |||||| | || || ||| | || ||| | ||| Sbjct 86792 AAGACCCTGACAGGAAGACC-ATCACTCTCGAGGTCGAACCCTTGGATACAATAGAAAAT 86850 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||| || || ||| || || || |||||||||| || ||| |||||||| ||||| Sbjct 86851 GTAAGGCCAA-GATCCAGGACAAGGAAGGAATTTCACCTGACCAGCAAAGACTGATCTTT 86909 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| | |||||| || |||||| | || || ||||| Sbjct 86910 GCTGGCAAGCAACTGGAAGATGGACGTACTTTGTTTGACTACAACATTCAAAAGGAGTCC 86969 Query 206365 ACTCTTCACCTTGTTTTGAGACTTC 206389 |||||||| |||| |||||||||| Sbjct 86970 ACTCTTCATATTGTGTTGAGACTTC 86994 Score = 87.8 bits (96), Expect = 4e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 204753 GAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCC 204812 |||||||||| |||| |||||||| ||||| || || | || |||||| |||||| | Sbjct 86994 GAAGTCTCAACACAATATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAAACAAAGTAC 86935 Query 204813 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||||||| ||||| || || ||||| || | ||| || Sbjct 86934 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTG 86892 >seq1010 Length=438066 Score = 120 bits (132), Expect = 7e-22 Identities = 151/206 (73%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || ||||| | | |||||| | || || ||| || || ||| | ||| | Sbjct 115040 AAGACCCTGACAGGGATGGCCATCACTCTCGAGGTTGAACCCTCAGATACAATAGAAAAA 115099 Query 206245 -GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 |||||| |||| || || || ||||||||| || ||| |||||||| ||||| Sbjct 115100 TGTAAAGGCCAAGAGCCAGGACAAGGAAGGAATTCCTCCTGACCAGCAAAGACTGATCTT 115159 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||| || |||||||| | |||||||| || |||||| | || || ||||| Sbjct 115160 TGCTGGCAAGCAACTGAAAGATGGACGTACTTTGGCTGACTACAACATTCAAAAGGAGTC 115219 Query 206364 TACTCTTCACCTTGTTTTGAGACTTC 206389 ||||||||| ||||| ||||||||| Sbjct 115220 TACTCTTCATCTTGTAGTGAGACTTC 115245 Score = 96.9 bits (106), Expect = 8e-15 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 204753 GAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCC 204812 ||||||||| ||||| |||||||||||||| || || | || |||||||||||||| | Sbjct 115245 GAAGTCTCACTACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGCCAAAGTAC 115186 Query 204813 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||| ||| ||||| || || ||||| || | ||| || Sbjct 115185 GTCCATCTTTCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTG 115143 >seq7544 Length=40362 Score = 109 bits (120), Expect = 1e-18 Identities = 134/182 (74%), Gaps = 1/182 (1%) Strand=Plus/Minus Query 206207 TCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAA 206266 ||||| | || || ||| || || ||| | ||| |||||| ||||| || || | Sbjct 29157 TCACTCTCGAGGTTGAACCCTCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGACA 29098 Query 206267 AAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATG 206326 | |||||||||| || ||| |||||||| ||||| || || ||||| ||||||||| Sbjct 29097 AGGAAGGAATTTCTCCTGACCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATG 29038 Query 206327 GAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGAC 206386 || | ||||| | || ||||| | || || ||||| ||||||| ||||| ||||||| Sbjct 29037 GATGTACTTT-TCTGACGACAACATTCAAAAGGAGTCCACTCTTCGTCTTGTGTTGAGAC 28979 Query 206387 TT 206388 || Sbjct 28978 TT 28977 >seq379 Length=586137 Score = 104 bits (114), Expect = 6e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 206200 AAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATT 206259 || || |||||| | || || ||| || || ||| | ||| |||||| ||||| Sbjct 190525 AAGACCATCACTCTCGAGGTCGAACCCTCAGATACAATAGAAAATGTAAAGGCCAAGATC 190584 Query 206260 CAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTG 206319 || || || |||| |||| || ||| |||||||| ||||| || | ||||| || Sbjct 190585 CAGGATAAGGAAGCAATTCCTCCTGACCAGCAAAGACTGATCTTTGCTGACAAGCAACTG 190644 Query 206320 GAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTT 206379 ||||||||| | |||||| | || ||| | || || ||||| |||||||| ||||| Sbjct 190645 GAAGATGGATGTACTTTGTCTGACCACAGCACTCAAAAGGAGTCCACTCTTCATCTTGTG 190704 Query 206380 TTGAGACTTC 206389 |||||||||| Sbjct 190705 TTGAGACTTC 190714 >seq323 Length=596616 Score = 98.7 bits (108), Expect = 2e-15 Identities = 136/189 (72%), Gaps = 5/189 (3%) Strand=Plus/Minus Query 206203 ACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAA 206262 || |||||| | ||||| ||| || || ||| || |||||| |||| || Sbjct 311224 ACCATCACTCTTGAAGTTGAACCCTCAGATACAACAAAAAATGTAAAGGCCAAGACCCAG 311165 Query 206263 GAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAA 206322 ||||| ||| ||||| || ||| |||||||| |||||||| || ||||| ||||| Sbjct 311164 GAAAAGGAAAGAATTCCTCCTGACAAGCAAAGACTAATCTTCGCTGGCAAGCAACTGGAA 311105 Query 206323 GATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTT-GTTTT 206381 |||||| | ||||| || |||||| | || || ||||| |||||||| ||| | || Sbjct 311104 GATGGACGTACTTT----GACTACAACATTCAAAAGGAGTCCACTCTTCATCTTAATGTT 311049 Query 206382 GAGACTTCG 206390 |||||||| Sbjct 311048 AAGACTTCG 311040 >seq8558 Length=1191863 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| |||| ||||| |||||| |||| Sbjct 299829 AAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAGAAC 299888 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || ||||| || || ||| || || || ||||| Sbjct 299889 GTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCCGACCAGCAGAGGCTCATCTTT 299948 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||||||||| | ||| | | ||||||||| ||||||||||||| Sbjct 299949 GCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCA 300008 Query 206365 ACTCTTCACCTTGT 206378 || || ||||| || Sbjct 300009 ACCCTGCACCTGGT 300022 >seq6001 Length=82083 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || || || ||||| |||| ||||| |||||| |||| Sbjct 45810 AAAACCTTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAGAAC 45751 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || ||||||||||| || || ||| || || || ||||| Sbjct 45750 GTGAAGGCCAAGATCCAGGAAAAAGAAGGCATCCCCCCTGACCAGCAGAGGCTCATCTTT 45691 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || | || ||| |||||||||| ||| | | ||||||||| |||||||||||||| Sbjct 45690 GCAAGCAAACAGCTGGAAGATGGCCACACTCTTTCTGATTACAACATCCAGAAAGAGTCT 45631 Query 206365 ACTCTTCACCTTGT 206378 || || ||||| || Sbjct 45630 ACCCTGCACCTGGT 45617 >seq11454 Length=977069 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || ||||| || || |||||| | | || ||| ||| || ||| | ||| Sbjct 83025 AAGACCCTGACAGGGAAGACCATCACTCTCAAGGTTGAACCTTCAGATACAATAGAAAAT 82966 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| || || ||||||||||| || ||| |||||||| ||||| Sbjct 82965 GTAAAGACCAAGATGCAGGATAAAGAAGGAATCCCTCCTGACCAGCAAAGACTGATCTTT 82906 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| |||| ||||| |||||| || |||||| | || || ||||| Sbjct 82905 GCTGGCAAGCAACTGGAGGATGGCCATACTTTGTATGACTACAACATTCAAAAGGAGTCC 82846 Query 206365 AC 206366 || Sbjct 82845 AC 82844 >seq3070 Length=217634 Score = 86.0 bits (94), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 206188 ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTC--TGACACAGTCGAATCAG 206245 || || || || || || |||| |||| ||||| || | |||||| |||| | Sbjct 177901 ACCCTGACTGGCAAGACCGTCACCCTGGAGGTGGA--GTCCAGTGACACCATCGAGAACG 177844 Query 206246 TAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCG 206305 | ||| ||||| || || || ||||| || | | ||| || || || ||||| | Sbjct 177843 TGAAGGCCAAGATCCAGGATAAGGAAGGCATCCTCCTTGACCAGCAGAGGCTCATCTTTG 177784 Query 206306 CCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTA 206365 | || || ||| |||||||||| | ||| | | ||||||||| ||||||||||||||| Sbjct 177783 CAGGCAAACAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCTA 177724 Query 206366 CTCTTCACCTTGT 206378 | || ||||| || Sbjct 177723 CCCTGCACCTGGT 177711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181643471112831