Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq11356 89.7 5e-13 seq2642 87.8 2e-12 >seq11356 Length=1134914 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 |||||||| |||||||| | | || ||||| || ||||||||||| || ||| || Sbjct 1059004 CAAGCGCAGGACCAAATGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCG 1059063 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 | ||| || |||||||| |||| | |||| | | ||| || ||||| || ||||| || Sbjct 1059064 CCCATCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTC 1059123 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 ||| || || || || | | || | || || | |||||||| || | || Sbjct 1059124 TTTTTCTTGGATCTTCCCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGT 1059183 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | || |||||||||| || || | || |||||||| Sbjct 1059184 GATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 1059222 >seq2642 Length=239306 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 147505 TACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTG 147564 |||| || ||||| | |||||||||||||||||| || ||| | || ||||| ||| Sbjct 96801 TACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCTAGGTTCTGCTGGTTG 96742 Query 147565 CTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602 || |||||||| || | |||||| ||||||||||||| Sbjct 96741 CTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGG 96704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476541430077960