Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq372 273 3e-68 seq790 178 2e-39 seq7436 161 1e-34 seq26 154 2e-32 seq9731 134 2e-26 seq11402 131 2e-25 >seq372 Length=588469 Score = 273 bits (302), Expect = 3e-68 Identities = 252/319 (79%), Gaps = 0/319 (0%) Strand=Plus/Minus Query 171072 GTGGTGACCCAGGATGAGAGGGTGCTGCTGAACACGCCAGCCTCCCTGAAATGCTCCCTG 171131 |||| ||||| |||| || | | |||||||||| || || || | | |||||| ||| Sbjct 327874 GTGGAGACCCGAGATGTAAGAGAGTTGCTGAACACACCTGCTTCTTTAAGATGCTCTCTG 327815 Query 171132 CAGACTTCTCAGGAGGTGCTGATTGTCACCTGGCAGAAAATCAAGCCCACCATTCCAGAG 171191 || | | ||||| || ||||||| || ||||| ||||||||| | | ||||| Sbjct 327814 CAACATCCCCAGGAAGTTTTGATTGTGACATGGCAAAAAATCAAGGCTGTAAGCCCAGAA 327755 Query 171192 AACATGATAACTTTTAGCAAAGACCACGGGGTGGTGGTCCAGCCGGCTTATAAGGACAAG 171251 |||||||| || |||||| | |||| ||||| || |||||||| || |||||||||||| Sbjct 327754 AACATGATCACCTTTAGCCAGAACCATGGGGTTGTAGTCCAGCCTGCCTATAAGGACAAG 327695 Query 171252 ATAAACATCACCCAGCTTGGACTCCAAAACTCAACCATCACTTTTTGGAATACCACCTTA 171311 ||||||||||||||||| |||||| ||||||||||| || || |||||||||||||| Sbjct 327694 ATAAACATCACCCAGCTGGGACTCATGAACTCAACCATTACCTTCTGGAATACCACCTTG 327635 Query 171312 GAGGACGAGGGGTGCTACAACTGCCTCTTTAACACCTTTGGGTCTGGGAAAATCTCGGGG 171371 || || || ||||| ||||| |||||||| || |||||||| |||||||| ||||| || Sbjct 327634 GAAGATGAAGGGTGTTACAAGTGCCTCTTCAATACCTTTGGTTCTGGGAAGATCTCAGGA 327575 Query 171372 GTGGCCTGCCTCACCCTCT 171390 | ||||||||||| |||| Sbjct 327574 ATAGCCTGCCTCACTCTCT 327556 Score = 212 bits (234), Expect = 7e-50 Identities = 213/277 (77%), Gaps = 0/277 (0%) Strand=Plus/Minus Query 171393 GTGCAGCCCACTGTGTTTCTGCATTATAAATTTTTTGATGACCACCTGAACATCACCTGT 171452 || |||||||| || || || || |||||||| | ||| |||||||| || ||||| || Sbjct 325208 GTACAGCCCACAGTATTCCTTCACTATAAATTATCTGAAGACCACCTAAATATCACTTGC 325149 Query 171453 TCTGCCAATGCCCGCCCGCCACCTCAGATTTTTTGGAAGATTTCGGGGTCAGAAATTGAA 171512 ||||||||||| ||||| | ||| ||| | |||||| | || |||||||| ||||| Sbjct 325148 TCTGCCAATGCTCGCCCAGCCCCTGTGATCTCCTGGAAGGTCTCTGGGTCAGAGATTGAG 325089 Query 171513 AACAGTAGCGAGGTTCTTTCCCATTCTAATGGAACTACTTCTGTAACCAGTGTACTCCAA 171572 ||||||| ||| |||| || || | ||||| || || ||||| ||||| | ||||| Sbjct 325088 AACAGTACTGAGATTCTCTCACAACCCAATGGGACAACGTCTGTCACCAGCATCCTCCAG 325029 Query 171573 GTTAAAGACCCCAAGAGTCAGTTGGGAAAGGAGGTTATCTGCCAAGTGTGGCACCTGGGA 171632 | |||||||||||||||||| |||| || ||||| |||||||| || ||||||||| Sbjct 325028 ATCAAAGACCCCAAGAGTCAGGTGGGGAAAGAGGTGATCTGCCAGGTACTGCACCTGGGG 324969 Query 171633 AATGTAACTAACTTAAGGGAAACTGTAAGCAAGGGTA 171669 | ||| || ||| ||||||||||| ||| |||| Sbjct 324968 ACTGTGACCGACTACAGGGAAACTGTGCACAAAGGTA 324932 >seq790 Length=469007 Score = 178 bits (196), Expect = 2e-39 Identities = 139/166 (84%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| ||||| || | ||| || | ||||||||||||||| | ||||||||| |||||||| Sbjct 200268 CTTCAGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAA 200209 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||| || |||||||||||||| || |||||||||||||||||||| || ||||| |||| Sbjct 200208 GGGCACACCCAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTT 200149 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATG 147147 ||||||| |||||||| ||| ||||||||| || || |||||| Sbjct 200148 CACCACGTAGAACTGGCAAAGGGCGTGGCACGGGGGTAGGGCCATG 200103 >seq7436 Length=43218 Score = 161 bits (178), Expect = 1e-34 Identities = 260/370 (70%), Gaps = 3/370 (1%) Strand=Plus/Plus Query 146772 CTAAACCGCCAGCGCCATGGGGATGGAGGGGTGCGGGTGGTAGCCCTCGAGGGCAAAATC 146831 |||||| |||| |||| || | ||| || || |||||| || | ||| || Sbjct 39348 CTAAACAGCCATTTCCATTTTAATAGTGGGATGGGGACTGTAGCCTTCAATCTGAAAGTC 39407 Query 146832 TTCTGCCCTGAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGGGAAGGG 146891 ||| ||| |||| ||||| || | ||| || | | || |||||||| ||||| || Sbjct 39408 TTCAGCCTTGAAGTCGTCGATTTTCTCAACTTTTCCAAGGATTTTGAGCTTTGGGAAAGG 39467 Query 146892 TCGGGGGT-TCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCG 146950 | | | ||| | ||||| |||||||| |||| | ||| | ||||| | ||| | Sbjct 39468 CCTTGATTCTCCCTGA-AGCTGCATTTTCAGCAGCTCAATGTGATCCAGGTAAATGTGTG 39526 Query 146951 CGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGT 147010 | || | || ||||| ||| |||| || ||||| ||||| || | ||| | ||||| Sbjct 39527 CATCTCGCAAAGTGTGTACAGAGTCACCTGGCTTCAGGCCTGTGATGTGTTCGGTCATGT 39586 Query 147011 AGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACC 147070 |||||||||| | |||||||| | |||| ||| || ||||||||| |||| || |||| Sbjct 39587 AGGTGAGCAGGGCATAGCTGGCGAGGTTGCAGGACACGCCCAGGCCCCTGTCTCCTGACC 39646 Query 147071 TCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGC 147130 |||||||||||| ||| || |||| | ||||||| || ||||| ||| |||| Sbjct 39647 TCTGGTACAGCT-GCAGGACAGCTGATGGCTCACCACGTAGAAGTGGCAAAGGGCATGGC 39705 Query 147131 ACGGCGGCAG 147140 || | ||||| Sbjct 39706 ACAGGGGCAG 39715 >seq26 Length=722459 Score = 154 bits (170), Expect = 2e-32 Identities = 133/167 (80%), Gaps = 12/167 (7%) Strand=Plus/Minus Query 178231 AGGGTTACTTGGGTTGCCAGGCCTTGTCAGAGATGATTCAGTTTTACTTGGAGGAGGTGA 178290 |||||||| |||||||||| |||||||| |||||||| ||||||||| |||||||||||| Sbjct 623439 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTGGAGGAGGTGA 623380 Query 178291 TGCCTCAGGCCGAGAATCACAGCGGGGGTGGAGGCCCGGACATTAAGGAGCATGTAAACT 178350 |||| ||||| ||| | || ||||| |||| ||||||||||| |||| Sbjct 623379 TGCCACAGGCTGAGGACCA------------TGGCCCCAACATCAAGGAGCATGTGAACT 623332 Query 178351 CTCTGGGGGAAAAGCTAAAGACCCTTAGAGTGAGGCTGCGGCGATGT 178397 | |||||||| ||||| |||||||| || |||||||| |||| ||| Sbjct 623331 CCCTGGGGGAGAAGCTGAAGACCCTCAGGCTGAGGCTGAGGCGCTGT 623285 Score = 113 bits (124), Expect = 5e-20 Identities = 77/87 (89%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 178462 AGCTTCAAGAAAAGGGTGTTTACAAAGCTATGAGTGAGTTTGATATTTTTATTAACTACA 178521 |||| ||||| |||||||| |||||||| |||||||||||||| || || || ||||||| Sbjct 621090 AGCTCCAAGAGAAGGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 621031 Query 178522 TAGAAGCTTACATGACAACAAAAATGA 178548 ||||||| |||||||||||||| |||| Sbjct 621030 TAGAAGCCTACATGACAACAAAGATGA 621004 >seq9731 Length=16050 Score = 134 bits (148), Expect = 2e-26 Identities = 266/389 (68%), Gaps = 10/389 (3%) Strand=Plus/Minus Query 146765 TTTTTTCCTAAACCGCCAGCGCCATGGGGATGGAGGGGTGCGGGTGGTAGCCCTCGAGGG 146824 |||||| ||||| |||| |||| || | ||| || || |||||| || | Sbjct 11000 TTTTTTTTTAAACAGCCATTTCCATTTTAATAGTGGGATGGGGACTGTAGCCTTCAATCT 10941 Query 146825 CAAAATCTTCTGCCCTGAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGG 146884 ||| ||||| ||| |||| | || || | ||| || | | || |||||||| | Sbjct 10940 GAAAGTCTTCAGCCTTGAAGCCATCGATTTTCTCAACTTTTCCAAGGATTTTGAGCTTTG 10881 Query 146885 GGAAGGGTCGGGGGT-TCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAG 146943 |||| || | | | ||| | ||||| |||||||| |||| ||| | ||||| Sbjct 10880 GGAAAGGGCTTGATTCTCCCTGA-AGCTGCATTTTCAGCAGCTCAGTGTGATCCAGGTAA 10822 Query 146944 ACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCC 147003 | ||| || || | || |||| | ||| || ||||| ||||| || | ||| || Sbjct 10821 ATGTGTGCATCTCGCAAAATGTGTA----GTCACCTGGCTTCAGGCCTGTGATGTGTGCG 10766 Query 147004 ACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCC 147063 ||||||||||||||| | |||||||| | |||| ||| || ||||||||| ||| Sbjct 10765 GTCATGTAGGTGAGCAGGGCATAGCTGGCGAGGTTGCAGGACACACCCAGGCCCCTGTGT 10706 Query 147064 CCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGG 147123 || |||||||||||||||| ||| || |||| || ||||||| || ||||| ||| Sbjct 10705 CCTGACCTCTGGTACAGCT-GCAGGACAGCTGATGGTTCACCACGTAGAAGTGGCAAAGG 10647 Query 147124 ATGTGGCACGGCGGCAGCGCCATGGCGGG 147152 |||||| ||||| | ||||||| Sbjct 10646 GCATGGCACAAGGGCAGGG---TGGCGGG 10621 >seq11402 Length=1033750 Score = 131 bits (144), Expect = 2e-25 Identities = 535/835 (64%), Gaps = 44/835 (5%) Strand=Plus/Minus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 ||| || |||||||| | |||| || | ||||||| ||||| | | |||||| Sbjct 907720 GTATTCCCTGGTGTTCACGGTTGGTCTGCTGGGCAATGTAGTGGTGGTGGTGATCCTCAC 907661 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 ||| ||||| | |||| || ||||||||||||| |||| |||| ||||| || || Sbjct 907660 AAAATACAATAAGCTCCGGGCTATGACCAACATCTACCTGCTCAATTTGGCCATTTCGGA 907601 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCACTCGGGGGGAACTGGTGG 8789 | |||| | | ||||| || || || |||||||||| | ||| |||| || Sbjct 907600 CTTGCTCTTCTTATTCACTCTGCCATTCTGGATTCACT--ATGTTGGGAGGAA----TGA 907547 Query 8790 GTGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCTTTGCAACGTGGCACTGTA 8849 ||||| | |||||| ||||||||||| | || || | || ||| |||| Sbjct 907546 GTGGGTTTTTGGCCACCATATGTGTAAGTTGCTCTCTGGGCTCTATTACATGGGCTTGTA 907487 Query 8850 CAGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGCAGTTGTGTACGC 8909 ||| || || | || ||||| || |||| | ||| ||||||| || | || || | Sbjct 907486 CAGTGAGATCTTCTTCATCATACTCCTGACCATAGACCGGTATCTGGCCATCGTTCACAC 907427 Query 8910 GGTGGCTTACAGGCTGGTCCGCGTGGTACCAATAGGCATCCTCGCCAGCCTCCTGGCCTG 8969 ||| | | | | ||| ||| | | || ||| || ||||| || | |||| Sbjct 907426 TGTGTTTGCCCTTCGAGCCCGGACGGTCACTTTGGGTATCGTCACCAGCGTCTTCACCTG 907367 Query 8970 GATTCTGGCTGTGTTGGGAACCATGCCAGAGTTTATCTTTTATGAATCCAATAATGCCAC 9029 | ||||| | ||| | | || | || || |||||||| |||| || | | | Sbjct 907366 GGGCCTGGCAGGGTTAGCAGCCCTCCCTGAATTTATCTTCCATGAGTCTCAAGAGGAGTT 907307 Query 9030 AGGCAAGGGGGTCTGCCAAGC-CTC-CTACAC------------AGACTTTTGGAAGGGG 9075 | || ||||| ||| ||| ||| | | || |||||| | Sbjct 907306 TGAACAGACTTTCTGC--AGCTCTCTTTACCCAAATAATGGAGAAAACACCTGGAAGTGT 907249 Query 9076 GTTGATGTTACCAGCATGACCAT----GGTCACCCTCATCCTGCCTTTGCTTATCATGGC 9131 | ||| | || |||| ||| |||| | || |||||| ||||| | ||||| Sbjct 907248 TTCCATGCTCTGAGGATGAACATCTTGGGTCTCGCT----CTGCCTCTGCTTGTTATGGC 907193 Query 9132 CTTCTGCTACTGGAAAATCATCAAGGTCCTCCTCA-AGGCCCACAACAGGTCGAGAAACC 9190 | ||||||||| ||| | || || || | | |||| ||| | ||| Sbjct 907192 CGTCTGCTACTCAGGAATAGTTAAAACACTGCTGAGATGCCC----CAGCAAAAAAAAAT 907137 Query 9191 TGCACGCCGTCAAGCTCATTTTGATCATGGTGGTGCTTTATTTTGTCTTTTGGATCCCCT 9250 | ||| || ||||||||| |||| ||||| | | ||| | || |||| |||| Sbjct 907136 ATAAGGCCATCCGGCTCATTTTTGTCATCATGGTGGTCTTCTTTATTTTCTGGACACCCT 907077 Query 9251 ACAACGTCCTGCTCATTTTACACACCTACCAAGAGGCCATTTTTGGGCCAGACTGTGAAG 9310 ||||| | | || || | | || || | | || | | | |||||||||| Sbjct 907076 ACAACCTGGTTGTCCTTCT-CTCAACTTTTCAAATGC--ACCTGGAGACAGACTGTGA-- 907022 Query 9311 CGCGGCGCAG---GGTGGACATGGCCCTCTTGGTGGCTGAGATGATCGCCTGCACCCACT 9367 || | |||| | ||||| ||||| | ||||| | ||| ||||||||| |||||||| Sbjct 907021 -GCAGAGCAGAAAGCTGGACCTGGCCATGCTGGTGACGGAGGTGATCGCCTACACCCACT 906963 Query 9368 GCTGCGTCAACCCCGTCATCTACGCGTTTGTGGGCGAAAAGTTCCAACAGAACCT 9422 |||| ||||||||||| |||||||| || || ||||| | |||||| || |||| Sbjct 906962 GCTGTGTCAACCCCGTGATCTACGCCTTCGTTGGCGAGAGGTTCCAGAAGCACCT 906908 Score = 111 bits (122), Expect = 2e-19 Identities = 205/300 (68%), Gaps = 18/300 (6%) Strand=Plus/Plus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 |||||| |||| ||| | |||| || | ||||| ||| ||| |||| |||||||| Sbjct 971677 GTACTCAGTGGTATTTGTCATTGGCCTGGTAGGCAACATCCTAGTGGTCCTGGTCCTCAT 971736 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 | ||||||||||||| | |||||||| ||||| ||| ||||||||||| | ||| Sbjct 971737 GCAATACAAGAGGCTCAAAAGCATGACCAGCATCTACCTCCTCAACCTGGCCATGTCTGA 971796 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCACTCGGGGGGA--ACTGG- 8786 |||| | | | ||||| || ||||| |||||| || | ||| | | ||| ||||| Sbjct 971797 CCTGATCTTCCTCTTCACGCTGCCCTTCTGGATTGAC-TACACGCTGAAGGATGACTGGA 971855 Query 8787 ---TGGGTGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCTTTGCAACGTGGC 8843 | |||| | |||||||| ||||| | || || | | ||| Sbjct 971856 TTTTTGGTG-----------ATCACATGTGCAAGTTGCTCTCTGGGCTCTATTTCTTGGG 971904 Query 8844 ACTGTACAGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGCAGTTGT 8903 |||||||||| || | || ||||||||| |||| | |||||||| || || |||| Sbjct 971905 CTTGTACAGCGAGATCTTCTTCATCATCCTGCTGACCATCGACAGGTACCTGGCCATTGT 971964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583402584650400