Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2241 104 2e-17 seq8558 102 7e-17 seq1833 100 3e-16 seq688 98.7 9e-16 seq2057 89.7 5e-13 seq6001 87.8 2e-12 seq3070 87.8 2e-12 seq1010 87.8 2e-12 seq1478 86.0 6e-12 >seq2241 Length=1355799 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCG 35581 |||||||| | ||| | || |||||||||||||||||| || | ||| | || | Sbjct 781216 CTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAATACGTCCA 781275 Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 |||||||| ||||| || ||||| |||| | |||||||| | ||||| | |||||| Sbjct 781276 TCGTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTG 781335 Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATC 35701 ||| |||||| ||| | | || | | || | ||| ||||| | ||||| Sbjct 781336 TCCTGGATCTTGGCCTTTACATTTTCTATTACATCCGAGGGTTCGACCTCGAGAGTGATG 781395 Query 35702 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || ||||||| || ||||| || |||||||| Sbjct 781396 GTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 781430 >seq8558 Length=1191863 Score = 102 bits (112), Expect = 7e-17 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | || || | || ||||||||||| || ||||| Sbjct 300005 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 299946 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || | || ||||| ||| |||||| ||||| | Sbjct 299945 GATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTT 299886 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||||||| ||||| || || || |||| || ||||| Sbjct 299885 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 299826 Query 35725 AAATATCTGCATTCTG 35740 || ||||||||| || Sbjct 299825 GAAAATCTGCATTTTG 299810 >seq1833 Length=323201 Score = 100 bits (110), Expect = 3e-16 Identities = 169/245 (69%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 35496 TCATCTCTTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAA 35555 |||| | ||| | ||| |||| | ||||||| | ||| | || ||||||||||| Sbjct 76041 TCATTTTCTTAGTACCAGCACGAAGTCTCAACAGAAGATGAAGAGTGGACTCCTTTTGAA 75982 Query 35556 TGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCT 35615 ||||||| || | ||| || || | || ||||| ||||| || ||||| |||| | | Sbjct 75981 TGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTT 75922 Query 35616 GCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGT 35675 |||||| ||||||| ||||| || |||||| ||| | | || | | || | Sbjct 75921 GCTGGTTAGAAGGAATTACTTCCTTATCTTGGATCTTGGCCTTTACATTTTCTATTGTAT 75862 Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 | | ||| ||||| | ||||| || || || |||| | |||||||| ||||||| Sbjct 75861 CCGAGGGTTCGACCTCGAGAGTGATGGTCTTCCCTGTCAGGATCTTCACAAAAATCTGCA 75802 Query 35736 TTCTG 35740 | ||| Sbjct 75801 TCCTG 75797 >seq688 Length=501387 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||| | | |||||||| | ||| | || |||||||||||||||||| || | | Sbjct 311226 CCACCATGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 311285 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || | | || ||||| ||||| | ||||| |||| | |||||||| | |||| Sbjct 311286 AAAGTATGTCCATCTTCCAGTTGCTTGTCAGCAAAGATCAGTCTTTGCTGGTCGGGAGGA 311345 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| |||||| ||| | || | | || || | ||| ||| Sbjct 311346 ATTCCTTCCTTGTCCTGGATCTTGACCTTTACGTTTTCTATTGTATCCGAGGGTTCGACC 311405 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || ||||||| || |||| || |||||||| Sbjct 311406 TCGAGAGTGATAGTCTTTCCCGTCAGGGTCTTCATGAAAATCTGCAT 311452 >seq2057 Length=292531 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||| | | |||||||| | ||| | || |||||||||||||||||| || | Sbjct 87001 CCACCATGAAGTCTCAACACAATATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAAAC 86942 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| |||| | |||||||| | | | Sbjct 86941 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGTGAA 86882 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| |||| || || | | | || | | || || | ||| ||| Sbjct 86881 ATTCCTTCCTTGTCCTGGATC-TTGGCCTTACATTTTCTATTGTATCCAAGGGTTCGACC 86823 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 || | ||||| || || || |||| || ||||| || ||||||| Sbjct 86822 TCGAGAGTGATGGTCTT-CCTGTCAGGGTCTTCACGAAAATCTGCA 86778 >seq6001 Length=82083 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | || | | || |||||||| || | ||||| Sbjct 45634 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCTTCCAGCTGTTTGCTTGCAAA 45693 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || | || || || ||| |||||| ||||| | Sbjct 45694 GATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTTTCCTGGATCTTGGCCTTCACGTT 45753 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||||||| ||||| || || || ||||| |||||||| Sbjct 45754 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAAGGTTTTCAC 45813 Query 35725 AAATATCTGCATTCTG 35740 || |||||| || || Sbjct 45814 GAAGATCTGCCTTTTG 45829 >seq3070 Length=217634 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | || || | || |||||||| || || ||||| Sbjct 177728 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAA 177787 Query 35605 TATCAACCGCTGCTGGTCCGAAGGA--ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGA 35662 || | || ||||||||| ||||| | || ||||| ||| |||||| ||||| Sbjct 177788 GATGAGCCTCTGCTGGTC--AAGGAGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACG 177845 Query 35663 GTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTC 35722 | | | ||||| || || |||||||||| |||| || || || |||| || || Sbjct 177846 TTCTCGATGGTGTCACTGGACTCCACCTCCAGGGTGACGGTCTTGCCAGTCAGGGTCGTC 177905 Query 35723 ACAAATATCTGCAT 35736 || || |||||||| Sbjct 177906 ACGAAGATCTGCAT 177919 >seq1010 Length=438066 Score = 87.8 bits (96), Expect = 2e-12 Identities = 157/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||| | | |||| || | ||| | ||| |||||||||||||||||| || ||| Sbjct 115252 CCACCATGAAGTCTCACTACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGCC 115193 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || | ||| ||||| || ||||| |||| | |||||||| | |||| Sbjct 115192 AAAGTACGTCCATCTTTCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGA 115133 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGA-GTTGCCACCGTGTCGCTCGATTCCAC 35688 | | ||||||||| | |||| ||| | | || | | || || | ||| || Sbjct 115132 ATTCCTTCCTTGTCCTGGCTCTTGGCCTTTACATTTTTCTATTGTATCTGAGGGTTCAAC 115073 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||| | | || |||| || ||||| || |||||||| Sbjct 115072 CTCGAGAGTGATGGCCATCCCTGTCAGGGTCTTCACGAAAATCTGCAT 115025 >seq1478 Length=366608 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | || || |||| | |||||| || || ||||| Sbjct 273067 CTCTTTCTGGATGTTGTAATCAGAAATAGTGCGGCCGTCTTACAGCTGTTTGCCTGCAAA 273008 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || | || || || ||| | |||| ||||| | | Sbjct 273007 GATGAGCCTCTGCTGGTCAGCGGGCATGCCTTCTTTATCCTGGGTCTTGGCCTTCACATT 272948 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | ||||| || | |||||||||| ||||| || || ||||||| || ||| | Sbjct 272947 CTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCCC 272888 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 272887 GAAGATCTGCAT 272876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450727609451880