Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq11356 102 8e-17 seq2241 102 8e-17 seq688 102 8e-17 seq6001 96.9 4e-15 seq8558 93.3 4e-14 seq11454 89.7 5e-13 seq1833 82.4 8e-11 >seq11356 Length=1134914 Score = 102 bits (112), Expect = 8e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || |||||||| || || ||||||||||| | |||| | || || |||||| Sbjct 1059020 TGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCCAGCTGT 1059079 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| ||||| | |||||| || || || ||||| ||||||||||| || || Sbjct 1059080 TTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCTTTTTCTTGGATCTTC 1059139 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||||| || | ||||| | ||||| || || || ||||| ||||| || Sbjct 1059140 CCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTC 1059199 Query 134691 AAAGTTTTAACGAAAATTTGCATT 134714 || || || || || || |||||| Sbjct 1059200 AAGGTCTTCACAAAGATCTGCATT 1059223 >seq2241 Length=1355799 Score = 102 bits (112), Expect = 8e-17 Identities = 158/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 |||| |||||| || || || ||||| |||||||||||||||||||| | ||| | | Sbjct 781213 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAA-AATACG 781271 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 ||||| || || ||||||||||| |||| | ||||| || || || || ||||| Sbjct 781272 TCCATCGTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTC 781331 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || || || || | | || || | ||| || |||||||| Sbjct 781332 CTTGTCCTGGATCTTGGCCTTTACATTTTCTATTACATCCGAGGGTTCGACCTCGAGAGT 781391 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || || || | || || |||||||| ||||| ||| Sbjct 781392 GATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATTG 781434 >seq688 Length=501387 Score = 102 bits (112), Expect = 8e-17 Identities = 158/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 |||| |||||| || || || ||||| |||||||||||||||||||| | ||| || || Sbjct 311235 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAA-AGTATG 311293 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || || || || ||| | ||||| |||| | ||||| ||||| || || ||||| Sbjct 311294 TCCATCTTCCAGTTGCTTGTCAGCAAAGATCAGTCTTTGCTGGTCGGGAGGAATTCCTTC 311353 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || || || || | ||| || || | ||| || |||||||| Sbjct 311354 CTTGTCCTGGATCTTGACCTTTACGTTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGT 311413 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || || || | || || | |||||| ||||| ||| Sbjct 311414 GATAGTCTTTCCCGTCAGGGTCTTCATGAAAATCTGCATATTG 311456 >seq6001 Length=82083 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || || || || || |||||||| || || ||||| || || Sbjct 45617 ACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCTTCC 45676 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 |||||||||| |||||| || | | |||||| || || || |||||||||||||| || Sbjct 45677 AGCTGTTTGCTTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTTTCCTGG 45736 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || || | ||||| | ||||| || || || ||||| || Sbjct 45737 ATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 45796 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || ||||| ||||| || ||| ||||| Sbjct 45797 CCAGTCAAGGTTTTCACGAAGATCTGCCTTTTG 45829 >seq8558 Length=1191863 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || || || || | || ||||| || || || || || || |||||||| || | Sbjct 300040 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAA 299981 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| ||||||||||| || | | |||||| ||||| || Sbjct 299980 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 299921 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || || || || | ||||| | ||||| Sbjct 299920 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 299861 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || ||||| || ||||| | || || |||||||| ||||||||| Sbjct 299860 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTTG 299810 >seq11454 Length=977069 Score = 89.7 bits (98), Expect = 5e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 134516 CGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575 |||||| |||||||||||||||||||| | || || || || || || ||||| Sbjct 82843 CGTGGACTCCTTTTGAATGTTGTAGTCATACAAAGTATGGCCATCCTCCAGTTGCTTGCC 82902 Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635 ||||| |||| | ||||| || || || || |||||||| || || || || || Sbjct 82903 AGCAAAGATCAGTCTTTGCTGGTCAGGAGGGATTCCTTCTTTATCCTGCATCTTGGTCTT 82962 Query 134636 GACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695 || || | ||| || || | ||| || | |||||| ||||| || || || | || Sbjct 82963 TACATTTTCTATTGTATCTGAAGGTTCAACCTTGAGAGTGATGGTCTTCCCTGTCAGGGT 83022 Query 134696 TTTAACGAAAATTTGCATTTTG 134717 || | |||||| ||||| ||| Sbjct 83023 CTTCATGAAAATCTGCATCTTG 83044 >seq1833 Length=323201 Score = 82.4 bits (90), Expect = 8e-11 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 |||| ||||| || || || ||||| |||||||||||||||||||| | ||| || | Sbjct 76018 AGTCTCAACAGAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAA-AGTACG 75960 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || || || || ||||| ||||| |||| | ||||| | | || || |||| Sbjct 75959 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTTAGAAGGAATTACTTC 75900 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || ||||| || || || || || | ||| || || | ||| || |||||||| Sbjct 75899 CTTATCTTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGT 75840 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || | | || || ||||| ||||| Sbjct 75839 GATGGTCTTCCCTGTCAGGATCTTCACAAAAATCTGCAT 75801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505324415991720