Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30]
11,711 sequences; 2,280,727,784 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq11472 190 2e-43
seq2631 179 3e-40
seq874 129 5e-25
seq11501 107 2e-18
seq11597 98.7 8e-16
seq6223 82.4 6e-11
>seq11472
Length=944226
Score = 190 bits (210), Expect = 2e-43
Identities = 584/891 (66%), Gaps = 18/891 (2%)
Strand=Plus/Minus
Query 43702 TGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTC 43761
|||| | ||||| || |||| | ||| || ||||| | ||| || ||||| |||| ||
Sbjct 784937 TGTCATCTTTCCTATCGAATACCGTGATATTTGGCAGACGTAGAAGAAAGCTGAGGCTTC 784878
Query 43762 ATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTT--AGCACATTGGATTGCATTA 43819
||||||||||| || || || || | | || ||| | ||||| | | || |
Sbjct 784877 CTTTTGGACAGCTGAGGAGGTGGACCTTTCCAAGGACATTCAGCACCGGGAA--GCCCTG 784820
Query 43820 AAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGG 43879
|| || | || | | |||| | || ||| |||| || | ||| || || || ||
Sbjct 784819 AAGCCTGAGGAGAGATATTTCACTTCGCATGTTCTGGCTTTCTCTGCGGCAAGTGATGGC 784760
Query 43880 ATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCACG 43938
||||| |||||||| ||||| |||||| ||||||||||| |||| ||||||| ||
Sbjct 784759 ATAGTAAATGAAAACTTGGTGGAGCGGTTTAGCCAAGAAGTTCAGATTA-CAGAAGCCCG 784701
Query 43939 ATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCT 43998
||||| || || || ||||||||| | ||||| | ||||| |||||||| ||||| ||
Sbjct 784700 TTGTTTCTACGGCTTCCAAATTGCCGTGGAAAACACACATTCTGAAATGTAGAGTCTCCT 784641
Query 43999 GATAGATACGTACATCAAAGATGGGCACGAGAA--GCATCGATTGTTTAATGCGATAGAA 44056
| || || |||| |||||| | ||||| | | | || ||||| || ||
Sbjct 784640 CGTTGACACTCACATTAAAGAT--TCCAGAGAAAGGGAATTTCTCTTCAATGCCATCGAG 784583
Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AAATTCAAAT 44113
||| | ||| | || | || ||||| |||||| | |||| | | |
Sbjct 784582 ACAATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCGTGCGCCGGATCGGGGACAAAGAG 784523
Query 44114 GATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173
| | | | |||||||| | | || ||||| | |||||||| || |||| ||| ||
Sbjct 784522 GCTACGTACGGAGAACGTGTCGCAGCCTTTGCCGCAGTGGAAGGAATCTTCTCTTCTGGT 784463
Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233
|| ||||| | || || ||| | || |||||||| ||||||| || | || |||||
Sbjct 784462 TCTTTTGCATCGATGTTCTGGCTCAAAAAACGAGGACTGATGCCCGGCCTCACATTTTCC 784403
Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293
|| || | || || | || || || ||||| || || ||||| ||| || | | | |
Sbjct 784402 AACGAACTTATTAGCAGAGACGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCGAA 784343
Query 44294 TATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTA 44353
| || | || | || ||||| ||| | | | || || | || || ||
Sbjct 784342 CACCT--GCTAC-ACAAACCTTCGGAGCAGAGAGTCAAAGGAATAATCGTCAGTGCGGTT 784286
Query 44354 AAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA-TGA 44412
| ||||||||| || | | || || || || || || || ||||| ||
Sbjct 784285 AGGATAGAACAGGAGCTCCTCACGGAGGCCCCGCCAGTGAAGCCCATTGGGATGAACTGC 784226
Query 44413 ACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTG 44472
| | ||||||| || || || |||| | | ||||| | | | ||| ||||||
Sbjct 784225 GC-TCTGATGAAGCAGTACATCGAATTCGTGGCAGACAGACTTATGCTGGGGCTGGGTGT 784167
Query 44473 CGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGG 44532
| || | | ||| |||| || |||| |||||||| |||||||| |||||||
Sbjct 784166 TGGCAAGGTTTTCAGAGTAGAAAATCCACTTGACTTTATGGAGAATATTTCACTGGAAGG 784107
Query 44533 CAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGT 44583
|| || ||||| | ||| || | || || || |||||| | ||||| ||
Sbjct 784106 GAAGACTAACTTCTCTGAGAAGAGAGTAGGCGAGTATCAGAGGATGGGAGT 784056
>seq2631
Length=239737
Score = 179 bits (198), Expect = 3e-40
Identities = 583/891 (65%), Gaps = 22/891 (2%)
Strand=Plus/Plus
Query 43702 TGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTC 43761
|||| | ||||| || |||| | ||| || ||||| | ||| || ||||| |||| ||
Sbjct 170643 TGTCATCTTTCCTATCGAATACCGTGATATTTGGCAGACGTATAAGAAAGCTGAGGCTTC 170702
Query 43762 ATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTT--AGCACATTGGATTGCATTA 43819
|| |||||||| || || || || | | || ||| | ||||| | | || |
Sbjct 170703 CTTCTGGACAGCTGAGGAGGTGGACCTTTCCAAGGACATTCAGCACCGGGAA--GCCCTG 170760
Query 43820 AAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGG 43879
|| || | | | | |||| | || ||| |||| || | ||| || || || ||
Sbjct 170761 AAGCCTGAGAAGAGATATTTCACTTCACATGTTCTGGCTTTCTCTGCAGCAAGTGATGGC 170820
Query 43880 ATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCACG 43938
||||| |||||||| ||||| ||| || ||||||||||| |||| ||||||| ||
Sbjct 170821 ATAGTAAATGAAAACTTGGTGGAGCGGCTTAGCCAAGAAGTTCAGATTA-CAGAAGCCCG 170879
Query 43939 ATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCT 43998
||||| || || || ||||||||| | ||||| | ||||| |||||||| ||||| ||
Sbjct 170880 TTGTTTCTACGGCTTCCAAATTGCCGTGGAAAACACACATTCTGAAATGTAGAGTCTCCT 170939
Query 43999 GATAGATACGTACATCAAAGATGGGCACGAGAA--GCATCGATTGTTTAATGCGATAGAA 44056
| || || |||| |||||| | ||||| | | | || |||| || ||
Sbjct 170940 CGTTGACACTCACATTAAAGAT--TCCAGAGAAAGGGAATTTCTCTTCAATGTCATCGAG 170997
Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AAATTCAAAT 44113
||| | |||| | ||| | || |||| |||||| | |||| | | |
Sbjct 170998 ACAATGCCTGTG--TAA--AGAAGCCAGATTGGGCCGTGCGCCGGATCGGGGACAAAGAG 171053
Query 44114 GATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173
| | | | |||||||| | | || ||||| | |||||||| || |||| ||| ||
Sbjct 171054 GCTACGTACGGAGAACGTGTCGCAGCCTTTGCCGCAGTGGAAGGAATCTTCTCTTCTGGT 171113
Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233
|| ||||| | || || ||| | || |||||||| ||||||| || | || |||||
Sbjct 171114 TCTTTTGCATCGATGTTCTGGCTCAAAAAACGAGGACTGATGCCCGGCCTCACATTTTCC 171173
Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293
||||| | || || | || || || ||||| || || ||||| ||| | | | | |
Sbjct 171174 AATGAACTTATTAGCAGAGACGAGGGTTTACACTGTGACTTTGCCTGCCCGATGTTCGAA 171233
Query 44294 TATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTA 44353
| || | || | || ||||| ||| | | | || || | || | || ||
Sbjct 171234 CACCT--GCTAC-ACAAACCTTCGGAGCAGAGAGTCAAAGGAATAATCGTCAACGCGGTT 171290
Query 44354 AAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA-TGA 44412
| |||||||| || | | || || || || || || || ||||| ||
Sbjct 171291 AGCATAGAACAGGAGCTCCTCACGGAGGCCCCGCCAGTGAAGCCCATTGGGATGAACTGC 171350
Query 44413 ACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTG 44472
| | ||||||| || || || |||| | | ||||| | | | |||| ||||||
Sbjct 171351 GC-TCTGATGAAGCAGTACATCGAATTCGTGGCAGACAGACTTATGCTGGAGCTGGGTGT 171409
Query 44473 CGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGG 44532
| || | | ||| |||| || |||| |||||||| |||||||| |||||||
Sbjct 171410 TGGCAAGGTTTTCAGAGTAGAAAATCCACTTGACTTTATGGAGAATATTTCACTGGAAGG 171469
Query 44533 CAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGT 44583
|| || ||||| | ||| || | || || || |||||| | ||||||||
Sbjct 171470 GAAGACTAACTTCTCTGAGAAGAGAGTAGGCGAGTATCAGAGGATGGGCGT 171520
>seq874
Length=1608279
Score = 129 bits (142), Expect = 5e-25
Identities = 164/226 (73%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 47222 CAATTTTTAGGACTTTATGAAAAATCAGGGAAAATATTATTTCTCGGGTTAGACAATGCA 47281
|| ||||||||| | ||| | ||| | || ||| | ||||||| || || || ||||
Sbjct 945946 CAGTTTTTAGGATTATATAAGAAAACTGGTAAATTGGTATTTCTTGGATTGGATAATGTG 945887
Query 47282 GGAAAAACGGCATTACTCCACATGCTCAAATACAATTGCATGAAAGAGCATAACCCTACA 47341
|||||||| |||| || |||||||| ||| | | | | | | ||| ||| |
Sbjct 945886 GGAAAAACAACATTGCTACACATGCTAAAAGATGACGGACTTGGACAACATGTCCCAATG 945827
Query 47342 TTACATCCGACCTCTGAACAACTAACAATTGCTGGCATAACATTTAGCACATTTGATTTA 47401
|||||||| || || ||| ||||||| ||||||||||| || |||| || |||||| |
Sbjct 945826 TTACATCCCACTTCAGAAGAACTAACCATTGCTGGCATGACCTTTACAACTTTTGATCTG 945767
Query 47402 GGAGGACACATTCAAGCGCGTAGAATGTGGCAAAATTATTTTCATG 47447
|| ||||| ||||||| || ||| ||||| |||| || ||| ||
Sbjct 945766 GGTGGACATGTTCAAGCTCGAAGAGTGTGGAAAAACTACCTTCCTG 945721
>seq11501
Length=2026878
Score = 107 bits (118), Expect = 2e-18
Identities = 96/118 (81%), Gaps = 2/118 (2%)
Strand=Plus/Minus
Query 43904 CGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGC 43962
|||||| ||||||||||| ||||| ||||| || ||||| ||||| || ||||||||
Sbjct 1249097 CGGTTTAGCCAAGAAGTTCAGATTACG-GAAGCCCGTTGTTTCTATGGCTTCCAAATTGC 1249039
Query 43963 CATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020
||| ||||| || ||||| |||||||| ||||| || || || || ||||| ||||||
Sbjct 1249038 CATGGAAAACATACATTCTGAAATGTATAGTCTCCTCATTGACACTTACATTAAAGAT 1248981
>seq11597
Length=809246
Score = 98.7 bits (108), Expect = 8e-16
Identities = 209/304 (69%), Gaps = 10/304 (3%)
Strand=Plus/Plus
Query 77263 GTCGGCCTCCTCATTGCCTTTGTATCCTGCGTGTCCTGGGATGTGCAGCCAGACAACCTC 77322
||| || || ||||||||| | |||| | ||||| || | |||| ||| || ||
Sbjct 721732 GTCAGCTTCTTCATTGCCTATAAATCCCGAATGTCCAGGAACATGCATCCACTGAATGTC 721791
Query 77323 CAGCTCCAAATTGAGTTGGTCCAGCTTCATAAAGTCATCCTTGTTGA-CAACTGACCCTC 77381
|| || || |||||| | || ||||| || ||||||| || || |||
Sbjct 721792 CATGCCCTGGACAAGCCTGTCCAGTTCCACGAAGTCCTCTTTGTTGATCACCT---CCTT 721848
Query 77382 CGCCATGCAG--CCTCCAGCCGTTCTGCTTCCAGTTCTTA-ACCCACTTAGTCACACCAT 77438
| | ||| |||||| || |||| ||||||| |||| ||||| ||||| | ||||
Sbjct 721849 CCCTGTGCTTGTCCTCCATCCATTCTTCTTCCAGC-CTTACACCCAATTAGTGATGCCAT 721907
Query 77439 TGATGGTGAACATGCTGTCTGTGTAGACGACCAGCTTCTTGATTTTGTTCTCCTGAGCTT 77498
|||| || ||||||||||| |||||| |||| ||| |||| || | ||| ||||
Sbjct 721908 TGATAGTAAACATGCTGTCCATGTAGAGAACCAACTTACTGATGTTCTGAGCCTTCGCTT 721967
Query 77499 GTTGCAGT-GCTTTGGATGCAGCCTGGATTTCAGCGCGCTGGTTTGTCTGTTGCCCCACA 77557
||| | || |||||| | || || || || || || | |||||||| ||| ||| |
Sbjct 721968 GTT-CTGTGGCTTTGCAGGCTGCATGAATCTCTGCTCTTTGGTTTGTTTGTCACCCAGGA 722026
Query 77558 AGTC 77561
||||
Sbjct 722027 AGTC 722030
>seq6223
Length=75078
Score = 82.4 bits (90), Expect = 6e-11
Identities = 68/83 (82%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759
|||||| | |||||||| || || | |||||| ||| ||||||| ||| | ||||||||
Sbjct 13614 TTTGTCATCTTTCCAATCCAGTACCCTGACATTTGGAAAATGTATAAACAGGCACAGGCA 13673
Query 43760 TCATTTTGGACAGCAGAAGAAGT 43782
|| || |||||||||||||| ||
Sbjct 13674 TCCTTCTGGACAGCAGAAGAGGT 13696
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397399271974555
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