Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq4034 127 3e-24 >seq4034 Length=161105 Score = 127 bits (140), Expect = 3e-24 Identities = 195/274 (71%), Gaps = 8/274 (3%) Strand=Plus/Plus Query 14277 GACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTACGGGACGCCC 14336 ||||| |||||||| |||||| | || |||||||| | ||||| || || | ||| Sbjct 93768 GACACATACAGCCCGGACGAGTATCTCTGGGCCACTATTCAGAGGATCCCCGA-AGTCCC 93826 Query 14337 GGGGGGATCCCCGTTC--ACGTCA--AGTACGACACCTCGGACATGTGGGCCAAGGTCAG 14392 ||| || | || | | | || ||||||||| || |||||| || | | ||| Sbjct 93827 AGGG---TCACTGTCCTTAAGCCATAAGTACGACATGTCCGACATGCACGCGATTGCCAG 93883 Query 14393 GTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCGCCTTG 14452 ||| ||||||||||| |||| || || || || || || |||| |||||||| || Sbjct 93884 GTTTGTCAAGTGGCAGTACTTTGAAGGTGACATTTCCAAGGGCGCCCCCTACCCGCCGTG 93943 Query 14453 CGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGGCTGAA 14512 | |||| ||||||| | | || | ||| | ||||| |||| ||| |||| ||| || Sbjct 93944 CAGCGGCGTCCACGTGCGCTCCGTGTGCGTTTTCGGAGCCGGTGACTTGAACTGGATGTT 94003 Query 14513 GAGCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546 | ||| | ||| |||||||||||||||||||| Sbjct 94004 GCACGTGCACCACTTGTTCGCCAACAAGTTCGAC 94037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658642768815360