Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq8558 129 1e-24 seq1478 118 2e-21 seq11356 116 9e-21 seq3070 116 9e-21 seq6001 114 3e-20 seq688 113 1e-19 seq2241 111 4e-19 seq1010 109 1e-18 seq7544 102 2e-16 seq2057 100 7e-16 seq1833 100 7e-16 seq1561 98.7 2e-15 seq379 89.7 1e-12 seq323 87.8 4e-12 >seq8558 Length=1191863 Score = 129 bits (142), Expect = 1e-24 Identities = 166/228 (73%), Gaps = 6/228 (3%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | |||||| || || || || |||||||| |||||||||||||| | | ||| Sbjct 300035 CCTCAGACGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGT 299976 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || || || || ||||| |||||||||||||| | | ||| || Sbjct 299975 GCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCC 299916 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059 |||||| || || || || || || |||| | | |||| ||| ||| || || Sbjct 299915 TTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTC---ACTGGGCTCCACCTC 299859 Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || ||||| || || ||||||||||| | ||||||||| Sbjct 299858 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCATTTT 299811 >seq1478 Length=366608 Score = 118 bits (130), Expect = 2e-21 Identities = 162/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | |||||| || || || ||||||||||| |||||||||||||| | | ||| Sbjct 273097 CCTTAGACGGAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAATAGT 273038 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | || |||| || ||| || || ||||| |||||||||||||| || | || || Sbjct 273037 GCGGCCGTCTTACAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGCGGGCATGCC 272978 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059 ||| || || || | || || ||| ||| | | |||| ||| ||| || || Sbjct 272977 TTCTTTATCCTGGGTCTTGGCCTTCACATTCTTGATGGTGTC---ACTGGGCTCCACCTC 272921 Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || |||||||| || |||||| |||||| |||||| Sbjct 272920 CAGGGTGATGGTCTTGCCCGTCAGGGTCTTCCCGAAGATCTGCAT 272876 >seq11356 Length=1134914 Score = 116 bits (128), Expect = 9e-21 Identities = 156/216 (72%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | ||| ||||| || ||||| ||||||||||| || | | || | |||||| Sbjct 1059011 AGGACCAAATGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCC 1059070 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||||||||| ||||| | |||||||||||| | | ||| || || |||||| Sbjct 1059071 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCTTTTTCT 1059130 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || ||||| |||| | | |||| ||| ||| || || || || || Sbjct 1059131 TGGATCTTCCCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 1059187 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || || | |||||||| |||| ||||||| Sbjct 1059188 GTCTTACCAGTCAAGGTCTTCACAAAGATCTGCATT 1059223 >seq3070 Length=217634 Score = 116 bits (128), Expect = 9e-21 Identities = 156/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || || || ||||||||||| |||||||||||||| | | ||| | ||||| Sbjct 177707 GAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATC 177766 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || ||| || || ||||| |||||||||||||| ||| |||||||| || Sbjct 177767 TTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAAGGAGGATGCCTTCCTTATC 177826 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATA 152069 || || || || || |||| | | ||| ||| | ||| || || || || | Sbjct 177827 CTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGA--CTCCACCTCCAGGGTGACG 177884 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||| ||||||||| |||||| Sbjct 177885 GTCTTGCCAGTCAGGGTCGTCACGAAGATCTGCAT 177919 >seq6001 Length=82083 Score = 114 bits (126), Expect = 3e-20 Identities = 157/218 (72%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || ||||||||||| |||||||||||||| | | ||| |||||| Sbjct 45614 AGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGTGGCCATCT 45673 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| | || ||||| |||||||||||||| | | ||| ||||| ||||| Sbjct 45674 TCCAGCTGTTTGCTTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTTTCC 45733 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || || |||| | | |||| ||| ||| || || || || || Sbjct 45734 TGGATCTTGGCCTTCACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 45790 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||| || | || |||||||||| |||| |||| Sbjct 45791 GTCTTGCCAGTCAAGGTTTTCACGAAGATCTGCCTTTT 45828 >seq688 Length=501387 Score = 113 bits (124), Expect = 1e-19 Identities = 160/223 (72%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||||||||||| ||||| ||||| |||||||| || | ||||| Sbjct 311235 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGT 311294 Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 |||||||| || |||| | | || ||||| || || |||||||| | | ||||||| Sbjct 311295 CCATCTTCCAGTTGCTTGT--CAGCAAAGATCAGTCTTTGCTGGTCGGGAGGAATTCCTT 311352 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064 |||| || || || || || || | |||| | || || || || || |||| Sbjct 311353 CCTTGTCCTGGATCTTGACCTTTACGTTTTCTATTGTATCCGAGGGTTCGACCTCGAGAG 311412 Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | ||||| || ||||| || ||||||| ||| | |||||| || Sbjct 311413 TGATAGTCTTTCCCGTCAGGGTCTTCATGAAAATCTGCATATT 311455 >seq2241 Length=1355799 Score = 111 bits (122), Expect = 4e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||||||||||| ||||| ||||| |||||||| || | ||| | | Sbjct 781213 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAATACGT 781272 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||| || || || || || ||||| || || |||||||| | | ||||||||| Sbjct 781273 CCATCGTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 781332 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || || ||| | |||| || || || || || ||||| Sbjct 781333 TTGTCCTGGATCTTGGCCTTTACATTTTCTATTACATCCGAGGGTTCGACCTCGAGAGTG 781392 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || ||||| || ||||||||||| | |||||| || Sbjct 781393 ATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATT 781433 >seq1010 Length=438066 Score = 109 bits (120), Expect = 1e-18 Identities = 158/222 (71%), Gaps = 1/222 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||||||||||||||||| ||||| |||||||| || || ||||| | Sbjct 115243 AGTCTCACTACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGCCAAAGTACGT 115184 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||||| || || || || ||||| || || |||||||| | | ||||||||| Sbjct 115183 CCATCTTTCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 115124 Query 152007 TTTTCTTGAATTTTTTGTTTGACA-GTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || || || | || || ||| | |||| | ||||| || || || ||||| Sbjct 115123 TTGTCCTGGCTCTTGGCCTTTACATTTTTCTATTGTATCTGAGGGTTCAACCTCGAGAGT 115064 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || | | || || || ||||||||||| | |||||| || Sbjct 115063 GATGGCCATCCCTGTCAGGGTCTTCACGAAAATCTGCATATT 115022 >seq7544 Length=40362 Score = 102 bits (112), Expect = 2e-16 Identities = 156/221 (71%), Gaps = 1/221 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||| ||||||| ||||| ||||| ||||||| || | ||||| | Sbjct 28978 AGTCTCAACACAAGACGAAGAGTGGACTCCTTTTGAATGTTGTCGTCAGA-AAAGTACAT 29036 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || || || || ||||| || || |||||||| | || ||||||||| Sbjct 29037 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGAAATTCCTTCC 29096 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || || ||| | |||| | || || || || || ||||| Sbjct 29097 TTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTG 29156 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || || ||| | || |||| |||||| | |||||| || Sbjct 29157 AGGGTCTTCCCCATCAGGGTCTCCACGAAAATCTGCATATT 29197 >seq2057 Length=292531 Score = 100 bits (110), Expect = 7e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||| ||||||||| ||||| ||||| |||||||| || ||||| | Sbjct 86992 AGTCTCAACACAATATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAAACAAAGTACGT 86933 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || || || || ||||| || || |||||||| | || ||||||||| Sbjct 86932 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGTGAAATTCCTTCC 86873 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || | | || | | ||| | |||| | || | || || || ||||| Sbjct 86872 TTGTCCTGGA-TCTTGGCCTTACATTTTCTATTGTATCCAAGGGTTCGACCTCGAGAGTG 86814 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCA 152103 || || || || || || ||||||||||| | ||||| Sbjct 86813 ATGGTCTT-CCTGTCAGGGTCTTCACGAAAATCTGCA 86778 >seq1833 Length=323201 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | | |||||||||||| ||||| ||||| |||||||| || | ||||| | Sbjct 76018 AGTCTCAACAGAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 75959 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || || || || ||||| || || ||||||| | | ||| ||||| Sbjct 75958 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTTAGAAGGAATTACTTCC 75899 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || ||||| || || || ||| | |||| | || || || || || ||||| Sbjct 75898 TTATCTTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTG 75839 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || || ||||||| || | |||||| Sbjct 75838 ATGGTCTTCCCTGTCAGGATCTTCACAAAAATCTGCAT 75801 >seq1561 Length=353970 Score = 98.7 bits (108), Expect = 2e-15 Identities = 159/226 (70%), Gaps = 7/226 (3%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | |||||| || || || || ||||| | |||||||| ||||| | | ||| Sbjct 203118 CCTCAGACGGAGGACCAGGTGCAGGGTCAACTCTCTCTGGATGTTATAATCAGAAAGAGT 203059 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTC-CGCCGAGATTC 152001 | |||||||| || ||| || || ||||| |||||||||||||| | | ||| | Sbjct 203058 GCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGGATGC 202999 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTT 152058 ||||||| || || || || || || |||| | | ||| ||| ||| || | Sbjct 202998 CTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGCGTC---ACTGGGCTCCACCT 202942 Query 152059 CAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || || || || || | ||||||||||||| |||||| Sbjct 202941 CCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 202896 >seq379 Length=586137 Score = 89.7 bits (98), Expect = 1e-12 Identities = 155/223 (70%), Gaps = 8/223 (4%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||||||||||| ||||| ||||| || ||| || | ||||| | Sbjct 190712 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAGTGCTGTGGTCAGACAAAGTACAT 190653 Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 |||||||| || |||| | | || ||||| || || |||||||| | | ||| ||| Sbjct 190652 CCATCTTCCAGTTGCTTGT--CAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTGCTT 190595 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064 |||| || || || || || ||| | |||| | ||||| || || || |||| Sbjct 190594 CCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCGACCTCGAGAG 190535 Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || || || | || ||||||||||| | |||||| || Sbjct 190534 TGATGGTCTT----CTCAGGGTCTTCACGAAAATCTGCATATT 190496 >seq323 Length=596616 Score = 87.8 bits (96), Expect = 4e-12 Identities = 144/206 (70%), Gaps = 5/206 (2%) Strand=Plus/Plus Query 151898 AAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG 151957 |||||||||||| ||||| ||||| |||||||| || ||||| | |||||||| || Sbjct 311055 AAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACGTCCATCTTCCAG 311110 Query 151958 GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAAT 152017 || || |||||||| || || |||| ||| | | |||| ||||||||| || | Sbjct 311111 TTGCTTGCCAGCGAAGATTAGTCTTTGCTTGTCAGGAGGAATTCTTTCCTTTTCCTGGGT 311170 Query 152018 TTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCC 152077 || || ||| | | | | ||||| || ||||||||||| || || | || Sbjct 311171 CTTGGCCTTTACATTTTTTGTTGTATCTGAGGGTTCAACTTCAAGAGTGATGGTCATCCC 311230 Query 152078 CGTGAGAGTCTTCACGAAGACCTGCA 152103 || || || |||| ||| | ||||| Sbjct 311231 CG-GAAGGTTTTCATGAAAATCTGCA 311255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153647672434081