Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq8558 125 5e-24 seq2241 123 2e-23 seq11356 120 2e-22 seq688 120 2e-22 seq3070 114 9e-21 seq1478 111 1e-19 seq6001 105 5e-18 seq1561 100 2e-16 seq1010 98.7 7e-16 seq7544 96.9 2e-15 seq2057 96.9 2e-15 seq6260 93.3 3e-14 seq379 82.4 5e-11 >seq8558 Length=1191863 Score = 125 bits (138), Expect = 5e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | | |||||||| || || ||| || |||||||||||||| | Sbjct 300040 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAA 299981 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || ||||||||||| || |||||||| | | |||||| || | || Sbjct 299980 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 299921 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | |||||||| ||| ||||| ||||| |||| | |||||||| || ||||| Sbjct 299920 ATGCCTTCCTTATCCTGGATCTTGGCCTTCAC-GTTCTCGATGGTGTCACTGGGCTCCAC 299862 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || || ||||| || || |||||||||||||| || ||||| Sbjct 299861 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAAATCTGCAT 299814 >seq2241 Length=1355799 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||||||| || ||||| ||| ||||||||| |||||||| || | | || Sbjct 781213 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAATACGT 781272 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | |||||||| ||||| || |||||||||| | ||||| || | ||| | |||||| Sbjct 781273 CCATCGTCCAGTTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 781332 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||| | || |||| || | || ||| ||||| | || Sbjct 781333 TTGTCCTGGATCTTGGCCTTTACATTTTCTATTACATCCGAGGGTTCGACCTCGAGAGTG 781392 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| |||||||||||||| || ||||| Sbjct 781393 ATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 781430 >seq11356 Length=1134914 Score = 120 bits (132), Expect = 2e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| || || ||| || || ||||||||||| || | || |||| | || ||| Sbjct 1059014 ACCAAATGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCC 1059073 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| ||||||||||||||||| | |||||| |||| || | || || ||||| Sbjct 1059074 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCTTTTTCTTGG 1059133 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||| | |||| | |||||||| || |||||||||| || || ||||| Sbjct 1059134 ATCTTCCCCTT-GACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTT 1059192 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||||||| ||||| ||||| Sbjct 1059193 ACCAGTCAAGGTCTTCACAAAGATCTGCAT 1059222 >seq688 Length=501387 Score = 120 bits (132), Expect = 2e-22 Identities = 161/221 (73%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGA--GT-TGG 44176 ||||||||||| || ||||| ||| ||||||||| |||||||| || | | || || Sbjct 311235 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGT 311294 Query 44177 CGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCT 44236 | | || ||||| ||||| | |||||||||| | ||||| || | ||| | ||| Sbjct 311295 C---CATCTTCCAGTTGCTTGTCAGCAAAGATCAGTCTTTGCTGGTCGGGAGGAATTCCT 311351 Query 44237 TCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACC 44296 ||||| ||| ||||| ||| | || |||| || || | || ||| ||||| | Sbjct 311352 TCCTTGTCCTGGATCTTGACCTTTACGTTTTCTATTGTATCCGAGGGTTCGACCTCGAGA 311411 Query 44297 GTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||||||||| |||||||||| ||| || ||||| Sbjct 311412 GTGATAGTCTTTCCCGTCAGGGTCTTCATGAAAATCTGCAT 311452 >seq3070 Length=217634 Score = 114 bits (126), Expect = 9e-21 Identities = 155/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || ||| || |||||||||||||| | || ||| | || ||| Sbjct 177711 ACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 177770 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC-TGAAGGCACACCTTCCTTTTCCGT 44247 ||||| || || |||||||| | | |||||| || | ||| | |||||||| ||| Sbjct 177771 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAAGGAGG-ATGCCTTCCTTATCCTG 177829 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| |||| | |||| | |||||||| ||| |||||||||| || | |||| Sbjct 177830 GATCTTGGCCTTC-ACGTTCTCGATGGTGTCACTGGACTCCACCTCCAGGGTGACGGTCT 177888 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || |||||| |||||||||| ||||| Sbjct 177889 TGCCAGTCAGGGTCGTCACGAAGATCTGCAT 177919 >seq1478 Length=366608 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || ||| || |||||||||||||| | | ||| |||| | | Sbjct 273084 ACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAATAGTGCGGCCGTCTTAC 273025 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| || || |||||||| | | |||||| || | |||| ||||| || ||| Sbjct 273024 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGCGGGCATGCCTTCTTTATCCTGG 272965 Query 44249 ATCTTCTGCTTCAATGTTCCT-ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||| |||| | ||| | |||||||| || |||||||||| || || ||||| Sbjct 272964 GTCTTGGCCTTC-ACATTCTTGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTT 272906 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||||||| ||||||| ||||| Sbjct 272905 GCCCGTCAGGGTCTTCCCGAAGATCTGCAT 272876 >seq6001 Length=82083 Score = 105 bits (116), Expect = 5e-18 Identities = 164/229 (72%), Gaps = 8/229 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168 || || ||||| | | |||||||| || || ||| || |||||||||||||| | Sbjct 45599 CCACCCCTCAGACATAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAA 45658 Query 44169 CGAGT-TGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 |||| |||| | || |||||||| || | |||||||| | | |||||| || | Sbjct 45659 AGAGTGTGGC---CATCTTCCAGCTGTTTGCTTGCAAAGATGAGCCTCTGCTGGTCAGGG 45715 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTC 44286 || | ||||| |||||| ||||| |||| | |||| | |||||||| || || Sbjct 45716 GGGATGCCTTCTTTTTCCTGGATCTTGGCCTTC-ACGTTCTCGATGGTGTCACTGGGCTC 45774 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGC 44335 |||||||| || || ||||| || || | ||| ||||||||||| ||| Sbjct 45775 CACCTCCAGGGTGATGGTCTTGCCAGTCAAGGTTTTCACGAAGATCTGC 45823 >seq1561 Length=353970 Score = 100 bits (110), Expect = 2e-16 Identities = 162/229 (71%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | | |||||||| || || ||| | |||||||| ||||| | Sbjct 203123 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCAACTCTCTCTGGATGTTATAATCAGAA 203064 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || |||||||| || || |||||||| | | |||||| || | || Sbjct 203063 AGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 203004 Query 44231 -ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCA 44288 | |||||||| ||| ||||| ||||| |||| | |||| ||| || |||| Sbjct 203003 GATGCCTTCCTTATCCTGGATCTTGGCCTTCAC-GTTCTCGATGGCGTCACTGGGCTCCA 202945 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || || ||||| || || | ||||||||||||||| ||||| Sbjct 202944 CCTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 202896 >seq1010 Length=438066 Score = 98.7 bits (108), Expect = 7e-16 Identities = 154/219 (70%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||| || || ||||| || ||||||||| |||||||| || || | || Sbjct 115243 AGTCTCACTACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGCCAAAGTACGT 115184 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || | ||| ||||| || |||||||||| | ||||| || | ||| | |||||| Sbjct 115183 CCATCTTTCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 115124 Query 44240 TTTTCCGTTATCTTCTGCTTCA-ATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGT 44298 || ||| |||| ||| | || || |||| || || | || ||| ||||| | || Sbjct 115123 TTGTCCTGGCTCTTGGCCTTTACATTTTTCTATTGTATCTGAGGGTTCAACCTCGAGAGT 115064 Query 44299 AATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || | | | || || |||||||||||||| || ||||| Sbjct 115063 GATGGCCATCCCTGTCAGGGTCTTCACGAAAATCTGCAT 115025 >seq7544 Length=40362 Score = 96.9 bits (106), Expect = 2e-15 Identities = 153/218 (70%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||||||| || |||| ||| ||||||||| ||||||| || | | | | Sbjct 28978 AGTCTCAACACAAGACGAAGAGTGGACTCCTTTTGAATGTTGTCGTCAGAAAAGT-ACAT 29036 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||| ||||| || |||||||||| | ||||| || | || | |||||| Sbjct 29037 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGAAATTCCTTCC 29096 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||| | || |||| || || | || ||| ||||| | || Sbjct 29097 TTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTG 29156 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||| ||| | ||||||| |||||| || ||||| Sbjct 29157 AGGGTCTTCCCCATCAGGGTCTCCACGAAAATCTGCAT 29194 >seq2057 Length=292531 Score = 96.9 bits (106), Expect = 2e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||||||| | ||||| ||| ||||||||| |||||||| || | || Sbjct 86992 AGTCTCAACACAATATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAAACAAAGTACGT 86933 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||| ||||| || |||||||||| | ||||| || | | | |||||| Sbjct 86932 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGTGAAATTCCTTCC 86873 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||| || || |||| || || || ||| ||||| | || Sbjct 86872 TTGTCCTGGATCTTGGCCTTACAT-TTTCTATTGTATCCAAGGGTTCGACCTCGAGAGTG 86814 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCA 44336 || ||| |||| || |||||||||||||| || |||| Sbjct 86813 ATGGTC-TTCCTGTCAGGGTCTTCACGAAAATCTGCA 86778 >seq6260 Length=1196837 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/194 (73%), Gaps = 9/194 (5%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGC--GAGT-TGGCGCTCGTCGTCCAGCTGCTTCCCGGC 44202 ||| || |||||||||| ||| | |||| |||| | || ||||||||||| || || Sbjct 647308 CTCTTTCTGGATGTTGTGATCAGAAAGAGTGTGGC---CATCTTCCAGCTGCTTGCCTGC 647252 Query 44203 AAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA 44262 |||||| | | |||||| | | ||| | |||||||| ||| ||||| ||||| Sbjct 647251 AAAGATGAGCCTCTGCTGTTGGGGAGG-ATGCCTTCCTTATCCTGCATCTTGGCCTTCAC 647193 Query 44263 TGTTCCT-ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCT 44321 ||||| ||| |||| || || ||||||| || || ||||| | || | ||||| Sbjct 647192 A-TTCCTGATGATGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCTGGTCAAGGTCT 647134 Query 44322 TCACGAAGATTTGC 44335 |||||||||||||| Sbjct 647133 TCACGAAGATTTGC 647120 >seq379 Length=586137 Score = 82.4 bits (90), Expect = 5e-11 Identities = 149/218 (68%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||||||| || ||||| ||| ||||||||| || ||| || | | | Sbjct 190712 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAGTGCTGTGGTCAGACAAAGTACAT 190653 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||| ||||| | |||||||||| | ||||| || | ||| | ||||| Sbjct 190652 CCATCTTCCAGTTGCTTGTCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTGCTTCC 190593 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||| | || |||| || || | || ||| ||||| | || Sbjct 190592 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCGACCTCGAGAGTG 190533 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| | |||||||||||||| || ||||| Sbjct 190532 ATGGTCTT----CTCAGGGTCTTCACGAAAATCTGCAT 190499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359939019357687