Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30]
11,711 sequences; 2,280,727,784 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq8558 168 2e-36
seq6001 154 4e-32
seq1010 143 6e-29
seq2241 140 8e-28
seq3070 138 3e-27
seq1561 138 3e-27
seq11356 136 1e-26
seq2057 132 1e-25
seq11454 118 3e-21
>seq8558
Length=1191863
Score = 168 bits (186), Expect = 2e-36
Identities = 172/222 (77%), Gaps = 7/222 (3%)
Strand=Plus/Plus
Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969
|||| ||||||| | ||||||||||| || || || || || || |||||||| ||||
Sbjct 299806 AGGTCAAAATGC---AGATTTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGG 299862
Query 177970 TGGAAAGCTCA--GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027
||| ||| || ||||||||||||||||| || ||||| ||||| || ||||| ||
Sbjct 299863 TGG--AGCCCAGTGACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCAT 299920
Query 178028 CCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087
||| || |||||||| | || ||||| || || || ||||| |||||||| | |||||
Sbjct 299921 CCCCCCCGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCT 299980
Query 178088 TGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
| | ||||| ||| |||| ||||| ||||| ||||| || ||
Sbjct 299981 TTCTGATTACAACATCCAGAAAGAGTCAACCCTGCACCTGGT 300022
>seq6001
Length=82083
Score = 154 bits (170), Expect = 4e-32
Identities = 169/222 (76%), Gaps = 7/222 (3%)
Strand=Plus/Minus
Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969
|||| |||| || | || ||||||||||| | || || || || |||||||| ||||
Sbjct 45833 AGGTCAAAAGGC---AGATCTTCGTGAAAACCTTGACTGGCAAGACCATCACCCTGGAGG 45777
Query 177970 TGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027
|||| || ||| |||||||||||||||| || ||||| ||||| |||||||| ||
Sbjct 45776 TGGA--GCCCAGTGACACCATCGAGAACGTGAAGGCCAAGATCCAGGAAAAAGAAGGCAT 45719
Query 178028 CCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087
||| || |||||||| | || ||||| || | |||||||| |||||||| |||||
Sbjct 45718 CCCCCCTGACCAGCAGAGGCTCATCTTTGCAAGCAAACAGCTGGAAGATGGCCACACTCT 45659
Query 178088 TGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
| | ||||| ||| |||| ||||| || || ||||| || ||
Sbjct 45658 TTCTGATTACAACATCCAGAAAGAGTCTACCCTGCACCTGGT 45617
>seq1010
Length=438066
Score = 143 bits (158), Expect = 6e-29
Identities = 162/216 (75%), Gaps = 1/216 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||| || || ||||| | | ||||| |||||||| ||| ||||||
Sbjct 115028 CAGATTTTCGTGAAGACCCTGACAGGGATGGCCATCACTCTCGAGGTTGAACCCTCAGAT 115087
Query 177984 ACCATCG-AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042
|| || | | || || || |||| |||||||| |||||||| ||||| ||||||||
Sbjct 115088 ACAATAGAAAAATGTAAAGGCCAAGAGCCAGGACAAGGAAGGAATTCCTCCTGACCAGCA 115147
Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102
| |||| ||||| || || || || || |||||||| | ||| | || || || ||| |
Sbjct 115148 AAGACTGATCTTTGCTGGCAAGCAACTGAAAGATGGACGTACTTTGGCTGACTACAACAT 115207
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||| || || || || |||||||| |||||||
Sbjct 115208 TCAAAAGGAGTCTACTCTTCATCTTGTAGTGAGACT 115243
>seq2241
Length=1355799
Score = 140 bits (154), Expect = 8e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||| || || || || || || ||||| |||||||| ||| ||| ||
Sbjct 781427 CAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTCGGAT 781368
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||||| |||||||| |||||||| ||||| |||||||||
Sbjct 781367 GTAATAGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAGCAA 781308
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| ||||| || || || || || || |||||| | | | | | || || ||| |
Sbjct 781307 AGACTGATCTTTGCAGGCAAGCAACTGGACGATGGACGTATTTTGTCTGACTACAACATT 781248
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||| || || || || |||||||| ||||||||
Sbjct 781247 CAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 781213
>seq3070
Length=217634
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||||| || || || || || || ||||||| |||||||| | |||
Sbjct 177916 CAGATCTTCGTGACGACCCTGACTGGCAAGACCGTCACCCTGGAGGTGGAGTCCAGTGAC 177857
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||||||||| || ||||| ||||| || ||||| |||| | ||||||||
Sbjct 177856 ACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCTCCTTGACCAGCAG 177797
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| || || |||||||| |||||||| | |||||| | ||||| ||| ||
Sbjct 177796 AGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATC 177737
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| ||||| || || ||||| || ||
Sbjct 177736 CAGAAAGAGTCTACCCTGCACCTGGT 177711
>seq1561
Length=353970
Score = 138 bits (152), Expect = 3e-27
Identities = 158/209 (76%), Gaps = 5/209 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || |||||||| || | || || || || |||||||| |||||||| || |||
Sbjct 202899 CAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 202956
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT-CCCTCCGGACCAG 178040
|| ||||||||||||| || ||||| ||||| || ||||| || ||| || ||||||
Sbjct 202957 ACGCCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCCTGACCAG 203016
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| | || ||||| || || |||||||| |||||||| | |||||| | |||||||||
Sbjct 203017 CAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTTTCTGATTATAAC 203076
Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| | ||| | || ||||| || ||
Sbjct 203077 ATCCAGAGAGAGTTGACCCTGCACCTGGT 203105
>seq11356
Length=1134914
Score = 136 bits (150), Expect = 1e-26
Identities = 153/203 (75%), Gaps = 4/203 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || ||||| || | || || || || |||||||| |||||||| || |||
Sbjct 1059219 CAGATCTTTGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 1059162
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||||||||| ||||| || || ||||| || ||||| || |||||||
Sbjct 1059161 ACACCATCGAGAACGTCAAGGGGAAGATCCAAGAAAAAGAGGGCATCCCCCCAGACCAGC 1059102
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | | ||||| ||||| |||||||| || ||||| | || || | || || |||
Sbjct 1059101 AGAGGTTGATCTTTGCCGGGAAACAGCTGGAGGATGGGCGCACCCTGTCTGACTACAACA 1059042
Query 178102 TCCAAAAAGAATCAACACTGCAT 178124
|||| |||||||| || ||||||
Sbjct 1059041 TCCAGAAAGAATCCACTCTGCAT 1059019
>seq2057
Length=292531
Score = 132 bits (146), Expect = 1e-25
Identities = 160/215 (74%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||| || || ||||| || || ||||| |||||||| ||| || ||
Sbjct 86780 CAGATTTTCGTGAAGACCCTGACAGG-AAGACCATCACTCTCGAGGTCGAACCCTTGGAT 86838
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || ||||| |||||||| |||||||| | || |||||||||
Sbjct 86839 ACAATAGAAAATGT-AAGGCCAAGATCCAGGACAAGGAAGGAATTTCACCTGACCAGCAA 86897
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| ||||| || || || || || ||||||||| | ||| | || || ||| |
Sbjct 86898 AGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTTTGACTACAACATT 86957
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||| || || || || ||| |||| ||||||||
Sbjct 86958 CAAAAGGAGTCCACTCTTCATATTGTGTTGAGACT 86992
>seq11454
Length=977069
Score = 118 bits (130), Expect = 3e-21
Identities = 119/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||| |||| || || ||||| || || ||||| ||| |||| ||| |||||
Sbjct 83037 CAGATTTTCATGAAGACCCTGACAGGGAAGACCATCACTCTCAAGGTTGAACCTTCAGAT 82978
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || ||||| ||||| ||||||||||||||||| |||||||||
Sbjct 82977 ACAATAGAAAATGTAAAGACCAAGATGCAGGATAAAGAAGGAATCCCTCCTGACCAGCAA 82918
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
|||| ||||| || || || || || || |||||
Sbjct 82917 AGACTGATCTTTGCTGGCAAGCAACTGGAGGATGG 82883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203550583518934
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |