Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq6383 266 3e-66
seq39192 149 6e-31
seq41434 147 2e-30
>seq6383
Length=23588
Score = 266 bits (294), Expect = 3e-66
Identities = 426/612 (70%), Gaps = 0/612 (0%)
Strand=Plus/Plus
Query 16927 CTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCC 16986
||| || ||| | ||| || ||||| |||||||| || || || || || || || ||
Sbjct 7503 CTCCGAAGGTTTGTGTGCCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGCAAGCC 7562
Query 16987 CTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTT 17046
||| |||||||| ||||| ||| | || ||||| | ||||||||| ||||| |||||
Sbjct 7563 CTCATCTCTGCTAATAAGCTCGCTGGAGAATGTGAGGCCGGGCATCAGCCCTCGCTTCTT 7622
Query 17047 TAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGC 17106
| ||| ||||||| | ||| |||||||| ||||| || || || || ||||||||
Sbjct 7623 GAGCCAGAATATCGATGTGAAAGACCCAGAGAAGAAGATTCCTTCCACCTCAGCAAACGC 7682
Query 17107 GATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGC 17166
| | || || | || || || ||||||| | |||||| | |||| || ||
Sbjct 7683 CACCACGCGCTCTCCATAGGTGGCCTCTTTGTCCCCAATCCAACGCAAGGCCCAGTCTGC 7742
Query 17167 TTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAG 17226
|| | ||| | ||| |||| | || ||||| || || | ||| | || | |
Sbjct 7743 CTTCTTCTTGACACAAGGCATCTTCTCGATGGCATTGAAGAGGAACTCCCTCTCTTTGGG 7802
Query 17227 GTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGC 17286
||| | || || || |||||||| ||||||||||| || || |||||||| ||||||||
Sbjct 7803 GTCTTTGATGTAAGTGTCGATGAGGAGGCTGTACATCTCAGAATGTATGTTTTCCATGGC 7862
Query 17287 TATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTC 17346
||||| || || || ||||| |||||||| | || ||||||||| | ||| || ||
Sbjct 7863 GATCTGGAAGCCATAGAAGCAGCGGGCTTCTGTGATCTGAACTTCCTGGCTGAACCGCTC 7922
Query 17347 CGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAAT 17406
| | | ||||| ||||||||||| ||||| || || || ||||||| | ||| |||
Sbjct 7923 CACCAAGTTTTCATTCACGATGCCATCGCTGGCTGCAAAGAACGCCAGGACGTGCGAAAT 7982
Query 17407 GAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCAC 17466
||| || | ||||| | || ||||| | | || ||||| | |||||
Sbjct 7983 GAAGTACCTCTCGTCGTCCTTCAGGGTCTCCCAGTGCAGCAGGTCCTTGGAAAGGTCCAC 8042
Query 17467 TTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTA 17526
|| || | ||||| || |||| | ||||| || ||||| | ||| || || | |||
Sbjct 8043 CTCCTCCGCTGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATCTGCCAGATGTCGTGGTA 8102
Query 17527 TTGTATGGGGAA 17538
| ||||||||
Sbjct 8103 CTCGATGGGGAA 8114
>seq39192
Length=20454
Score = 149 bits (164), Expect = 6e-31
Identities = 315/465 (68%), Gaps = 15/465 (3%)
Strand=Plus/Minus
Query 16936 TGTATGTTTA--AGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCT 16993
||| ||| || || ||||| |||||||| || || || || || || || ||||| |||
Sbjct 14326 TGTTTGTGTAGCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGCAA-CCCTCATCT 14268
Query 16994 CTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAA 17053
||| | ||||| || || || ||||| | || |||||| ||||| ||||| | ||
Sbjct 14267 CTGTTAATAAGCTCATTGGAGAATGTGAGGCCAGGCATCAGCCCTCGCTTCTTGAGCCCG 14208
Query 17054 AATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAAT 17113
|||||| | | | |||||||||||||| || || || | || ||||| | | |
Sbjct 14207 AATATCAATGTGGAAGACCCAGAAAAGAAGATTCCTTCCATGGCAGCAAAGGTCACCACA 14148
Query 17114 CGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCA---CTC-GGCTTT 17169
|| || | || | || ||||||| | |||||| || || ||| | || |
Sbjct 14147 CGATCTCCATAGGGGGCCTCTTTGTCCCCAATCCA-------ACGCAAGGCTCAGTCTGT 14095
Query 17170 TTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTC 17229
| ||| | ||| |||| |||| ||| | || || | ||| | | || ||||
Sbjct 14094 CTTCTTGACACAAGGCATCATTTCAATGACGTTGAAGAGGCACTCCCTCTTCTTGGGGTC 14035
Query 17230 GAT-TATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTA 17288
| || || || || ||||| | ||| |||| || || |||||||| |||||||| |
Sbjct 14034 CTTGAATGTAAGTGTCTATGAGGAAGCTATACACCTCAGAATGTATGTTTTCCATGGCAA 13975
Query 17289 TCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCG 17348
||| || ||||| ||||| | ||||| | || ||||||||| | || || |||
Sbjct 13974 CCTGGAAGCCGTAGAAGCAGCAGGCTTTTGTGATCTGAACTTCCTGGCTAAACCGCTCCA 13915
Query 17349 CTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCA 17393
| | ||| | |||| |||||| || ||| | || || |||||||
Sbjct 13914 CCAAGTTTGCATTCATGATGCCATCACTCACTGCAAAGAACGCCA 13870
>seq41434
Length=11022
Score = 147 bits (162), Expect = 2e-30
Identities = 462/709 (65%), Gaps = 10/709 (1%)
Strand=Plus/Minus
Query 16667 CCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGAT 16726
||||| || || || |||| ||| ||| || || ||||| || || ||||| || ||
Sbjct 7889 CCCATCCTCTGATATTCGCCTTCGCTTTTCTCAAAGAAGTTGGTCTTCCCCTCCAGTGAA 7830
Query 16727 ATATTCTCCATGAAATCAAAAGGATTAGTAGCT-GAAAATATTTTAGAGTACCCCAGTTC 16785
|||||||||||||| ||||| | || | || | ||| || | |||| | | |
Sbjct 7829 ATATTCTCCATGAAGTCAAACCGGTTTTCAACTTGGAAAGCCTTGCTAAAACCCAACTCC 7770
Query 16786 GGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCC 16845
|| | | || || || | |||| || || || ||| || ||| ||||| ||
Sbjct 7769 AGC-AGGAGCCTGTCAGCCATGAATTGAATGTACTGCTTCATCAAAGTGCAATTCATGCC 7711
Query 16846 TATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTT 16905
|| || || || | || || || | || | ||||| |||||| | |
Sbjct 7710 AATGAGCTTCACTGGCAAGGCCTCGGTGAGGAACTCCTCTTCTATCCTAACCGCAT---T 7654
Query 16906 AATAATACTAGCA---ACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAG 16962
|||||| | || |||| | ||| || ||| | | || ||||| ||||||||
Sbjct 7653 AATAATTATTTCATTTACTCTCTGCTCTGAAGGTTTGTACAACAGGTGTTTGAACATCAG 7594
Query 16963 ACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAA 17022
|| || || || || || | ||||| |||||||| ||||| ||| | || ||||| |
Sbjct 7593 GCAGGCAAAGTCCCAGTGATAGCCCTCATCTCTGCTAATAAGCTCGCTGGAGAATGTGAG 7534
Query 17023 CCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAA 17082
|| |||||| ||||| ||| | | ||| ||||| | | ||| ||||||||||||||
Sbjct 7533 ACCAGGCATCAGCCCTCGCTTCCTGAGCCAGAATATTGATGTGAAAGACCCAGAAAAGAA 7474
Query 17083 TATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACG 17142
| || | || ||||| || | | | || | | || | ||||||| |
Sbjct 7473 GGTTCCTTGCACCTCAGCAAAGGCCACCACATGCTCTCCACAGGTGGTCTCTTTGTCCCC 7414
Query 17143 AATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTT 17202
||||| | |||| | | || | ||| | ||| |||| || | ||| ||
Sbjct 7413 GATCCAGCGCAAGGCCCAGTATACCTTCTTCTTGACACAAGGCATCAGTTTGAAGGCATT 7354
Query 17203 AAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACAT 17262
|| | ||| |||||| | || | ||||| || | || ||| |||||||||||
Sbjct 7353 GAAGAGGAACTCCCTTTCCTTGTGATCTTTGATATAAGTGTTGAGGAGGAGGCTGTACAT 7294
Query 17263 TTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTAT 17322
|| || ||||| || |||||||| ||||| || ||||| ||||| | |||||| | ||
Sbjct 7293 CTCAGAATGTATATTTTCCATGGCAATCTGGAAGCCGTAGAAGCAGCAGGCTTCTGTGAT 7234
Query 17323 TTGAACTTCCACG-TAGAATCGTTCCGCTAGATTTTCGTTCACGATGCC 17370
||||||| | | || | | | ||| | | ||||| ||||| |||||
Sbjct 7233 CTGAACTTGCTGGCTATACT-GCTCCACCAAGTTTTCATTCACAATGCC 7186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 516397936162680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |