Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq6383 266 3e-66 seq39192 149 6e-31 seq41434 147 2e-30 >seq6383 Length=23588 Score = 266 bits (294), Expect = 3e-66 Identities = 426/612 (70%), Gaps = 0/612 (0%) Strand=Plus/Plus Query 16927 CTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCC 16986 ||| || ||| | ||| || ||||| |||||||| || || || || || || || || Sbjct 7503 CTCCGAAGGTTTGTGTGCCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGCAAGCC 7562 Query 16987 CTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTT 17046 ||| |||||||| ||||| ||| | || ||||| | ||||||||| ||||| ||||| Sbjct 7563 CTCATCTCTGCTAATAAGCTCGCTGGAGAATGTGAGGCCGGGCATCAGCCCTCGCTTCTT 7622 Query 17047 TAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGC 17106 | ||| ||||||| | ||| |||||||| ||||| || || || || |||||||| Sbjct 7623 GAGCCAGAATATCGATGTGAAAGACCCAGAGAAGAAGATTCCTTCCACCTCAGCAAACGC 7682 Query 17107 GATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGC 17166 | | || || | || || || ||||||| | |||||| | |||| || || Sbjct 7683 CACCACGCGCTCTCCATAGGTGGCCTCTTTGTCCCCAATCCAACGCAAGGCCCAGTCTGC 7742 Query 17167 TTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAG 17226 || | ||| | ||| |||| | || ||||| || || | ||| | || | | Sbjct 7743 CTTCTTCTTGACACAAGGCATCTTCTCGATGGCATTGAAGAGGAACTCCCTCTCTTTGGG 7802 Query 17227 GTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGC 17286 ||| | || || || |||||||| ||||||||||| || || |||||||| |||||||| Sbjct 7803 GTCTTTGATGTAAGTGTCGATGAGGAGGCTGTACATCTCAGAATGTATGTTTTCCATGGC 7862 Query 17287 TATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTC 17346 ||||| || || || ||||| |||||||| | || ||||||||| | ||| || || Sbjct 7863 GATCTGGAAGCCATAGAAGCAGCGGGCTTCTGTGATCTGAACTTCCTGGCTGAACCGCTC 7922 Query 17347 CGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAAT 17406 | | | ||||| ||||||||||| ||||| || || || ||||||| | ||| ||| Sbjct 7923 CACCAAGTTTTCATTCACGATGCCATCGCTGGCTGCAAAGAACGCCAGGACGTGCGAAAT 7982 Query 17407 GAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCAC 17466 ||| || | ||||| | || ||||| | | || ||||| | ||||| Sbjct 7983 GAAGTACCTCTCGTCGTCCTTCAGGGTCTCCCAGTGCAGCAGGTCCTTGGAAAGGTCCAC 8042 Query 17467 TTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTA 17526 || || | ||||| || |||| | ||||| || ||||| | ||| || || | ||| Sbjct 8043 CTCCTCCGCTGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATCTGCCAGATGTCGTGGTA 8102 Query 17527 TTGTATGGGGAA 17538 | |||||||| Sbjct 8103 CTCGATGGGGAA 8114 >seq39192 Length=20454 Score = 149 bits (164), Expect = 6e-31 Identities = 315/465 (68%), Gaps = 15/465 (3%) Strand=Plus/Minus Query 16936 TGTATGTTTA--AGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCT 16993 ||| ||| || || ||||| |||||||| || || || || || || || ||||| ||| Sbjct 14326 TGTTTGTGTAGCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGCAA-CCCTCATCT 14268 Query 16994 CTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAA 17053 ||| | ||||| || || || ||||| | || |||||| ||||| ||||| | || Sbjct 14267 CTGTTAATAAGCTCATTGGAGAATGTGAGGCCAGGCATCAGCCCTCGCTTCTTGAGCCCG 14208 Query 17054 AATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAAT 17113 |||||| | | | |||||||||||||| || || || | || ||||| | | | Sbjct 14207 AATATCAATGTGGAAGACCCAGAAAAGAAGATTCCTTCCATGGCAGCAAAGGTCACCACA 14148 Query 17114 CGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCA---CTC-GGCTTT 17169 || || | || | || ||||||| | |||||| || || ||| | || | Sbjct 14147 CGATCTCCATAGGGGGCCTCTTTGTCCCCAATCCA-------ACGCAAGGCTCAGTCTGT 14095 Query 17170 TTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTC 17229 | ||| | ||| |||| |||| ||| | || || | ||| | | || |||| Sbjct 14094 CTTCTTGACACAAGGCATCATTTCAATGACGTTGAAGAGGCACTCCCTCTTCTTGGGGTC 14035 Query 17230 GAT-TATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTA 17288 | || || || || ||||| | ||| |||| || || |||||||| |||||||| | Sbjct 14034 CTTGAATGTAAGTGTCTATGAGGAAGCTATACACCTCAGAATGTATGTTTTCCATGGCAA 13975 Query 17289 TCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCG 17348 ||| || ||||| ||||| | ||||| | || ||||||||| | || || ||| Sbjct 13974 CCTGGAAGCCGTAGAAGCAGCAGGCTTTTGTGATCTGAACTTCCTGGCTAAACCGCTCCA 13915 Query 17349 CTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCA 17393 | | ||| | |||| |||||| || ||| | || || ||||||| Sbjct 13914 CCAAGTTTGCATTCATGATGCCATCACTCACTGCAAAGAACGCCA 13870 >seq41434 Length=11022 Score = 147 bits (162), Expect = 2e-30 Identities = 462/709 (65%), Gaps = 10/709 (1%) Strand=Plus/Minus Query 16667 CCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGAT 16726 ||||| || || || |||| ||| ||| || || ||||| || || ||||| || || Sbjct 7889 CCCATCCTCTGATATTCGCCTTCGCTTTTCTCAAAGAAGTTGGTCTTCCCCTCCAGTGAA 7830 Query 16727 ATATTCTCCATGAAATCAAAAGGATTAGTAGCT-GAAAATATTTTAGAGTACCCCAGTTC 16785 |||||||||||||| ||||| | || | || | ||| || | |||| | | | Sbjct 7829 ATATTCTCCATGAAGTCAAACCGGTTTTCAACTTGGAAAGCCTTGCTAAAACCCAACTCC 7770 Query 16786 GGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCC 16845 || | | || || || | |||| || || || ||| || ||| ||||| || Sbjct 7769 AGC-AGGAGCCTGTCAGCCATGAATTGAATGTACTGCTTCATCAAAGTGCAATTCATGCC 7711 Query 16846 TATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTT 16905 || || || || | || || || | || | ||||| |||||| | | Sbjct 7710 AATGAGCTTCACTGGCAAGGCCTCGGTGAGGAACTCCTCTTCTATCCTAACCGCAT---T 7654 Query 16906 AATAATACTAGCA---ACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAG 16962 |||||| | || |||| | ||| || ||| | | || ||||| |||||||| Sbjct 7653 AATAATTATTTCATTTACTCTCTGCTCTGAAGGTTTGTACAACAGGTGTTTGAACATCAG 7594 Query 16963 ACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAA 17022 || || || || || || | ||||| |||||||| ||||| ||| | || ||||| | Sbjct 7593 GCAGGCAAAGTCCCAGTGATAGCCCTCATCTCTGCTAATAAGCTCGCTGGAGAATGTGAG 7534 Query 17023 CCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAA 17082 || |||||| ||||| ||| | | ||| ||||| | | ||| |||||||||||||| Sbjct 7533 ACCAGGCATCAGCCCTCGCTTCCTGAGCCAGAATATTGATGTGAAAGACCCAGAAAAGAA 7474 Query 17083 TATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACG 17142 | || | || ||||| || | | | || | | || | ||||||| | Sbjct 7473 GGTTCCTTGCACCTCAGCAAAGGCCACCACATGCTCTCCACAGGTGGTCTCTTTGTCCCC 7414 Query 17143 AATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTT 17202 ||||| | |||| | | || | ||| | ||| |||| || | ||| || Sbjct 7413 GATCCAGCGCAAGGCCCAGTATACCTTCTTCTTGACACAAGGCATCAGTTTGAAGGCATT 7354 Query 17203 AAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACAT 17262 || | ||| |||||| | || | ||||| || | || ||| ||||||||||| Sbjct 7353 GAAGAGGAACTCCCTTTCCTTGTGATCTTTGATATAAGTGTTGAGGAGGAGGCTGTACAT 7294 Query 17263 TTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTAT 17322 || || ||||| || |||||||| ||||| || ||||| ||||| | |||||| | || Sbjct 7293 CTCAGAATGTATATTTTCCATGGCAATCTGGAAGCCGTAGAAGCAGCAGGCTTCTGTGAT 7234 Query 17323 TTGAACTTCCACG-TAGAATCGTTCCGCTAGATTTTCGTTCACGATGCC 17370 ||||||| | | || | | | ||| | | ||||| ||||| ||||| Sbjct 7233 CTGAACTTGCTGGCTATACT-GCTCCACCAAGTTTTCATTCACAATGCC 7186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516397936162680