Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq6383 206 3e-48 seq32390 111 2e-19 >seq6383 Length=23588 Score = 206 bits (228), Expect = 3e-48 Identities = 405/599 (68%), Gaps = 0/599 (0%) Strand=Plus/Plus Query 16184 AGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGT 16243 |||||||| ||||| || || || ||||| || || | || || |||||||| ||||| Sbjct 7522 AGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGCAAGCCCTCATCTCTGCTAATAAGC 7581 Query 16244 TCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA 16303 ||| |||| || || | || ||||| ||||| ||||| | ||||||||||| | Sbjct 7582 TCGCTGGAGAATGTGAGGCCGGGCATCAGCCCTCGCTTCTTGAGCCAGAATATCGATGTG 7641 Query 16304 AATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTAC 16363 || ||||| || ||||| || || || || ||||| || | | || || | || Sbjct 7642 AAAGACCCAGAGAAGAAGATTCCTTCCACCTCAGCAAACGCCACCACGCGCTCTCCATAG 7701 Query 16364 GTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCC 16423 || || ||||| | | |||||| | |||| || || || | || | |||| | Sbjct 7702 GTGGCCTCTTTGTCCCCAATCCAACGCAAGGCCCAGTCTGCCTTCTTCTTGACACAAGGC 7761 Query 16424 ATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCA 16483 ||| | || ||||| || || | ||| | || | || | || || || || Sbjct 7762 ATCTTCTCGATGGCATTGAAGAGGAACTCCCTCTCTTTGGGGTCTTTGATGTAAGTGTCG 7821 Query 16484 ATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAG 16543 || || | |||||||| || || |||||||| || ||||| ||||| || ||||||||| Sbjct 7822 ATGAGGAGGCTGTACATCTCAGAATGTATGTTTTCCATGGCGATCTGGAAGCCATAGAAG 7881 Query 16544 CATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACG 16603 || || || || | || || |||||| | || || ||| ||| ||| ||||||||| Sbjct 7882 CAGCGGGCTTCTGTGATCTGAACTTCCTGGCTGAACCGCTCCACCAAGTTTTCATTCACG 7941 Query 16604 ATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGAT 16663 || || || || || ||||| ||||||| | |||| |||||| || | ||||| Sbjct 7942 ATGCCATCGCTGGCTGCAAAGAACGCCAGGACGTGCGAAATGAAGTACCTCTCGTCGTCC 8001 Query 16664 GTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAG 16723 | || | | ||| | | || ||||| | ||||| || || | ||||| ||| Sbjct 8002 TTCAGGGTCTCCCAGTGCAGCAGGTCCTTGGAAAGGTCCACCTCCTCCGCTGTCCAGAAG 8061 Query 16724 CTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGAC 16782 |||| | ||||| || ||||| | ||| || || | ||| | ||||| || | ||| Sbjct 8062 GAAGCCTCGGCCTTCTTGTACATCTGCCAGATGTCGTGGTACTCGATGGGGAAGATGAC 8120 >seq32390 Length=18494 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283 |||| ||||||||||| ||||| |||||||| || | || ||||| |||| ||||| Sbjct 1995 CTTCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCT 1936 Query 16284 TTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAG 16343 ||||||||||||| |||||||| || ||||| ||||| || || || |||| ||||| | Sbjct 1935 TTAACCAGAATATTGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 1876 Query 16344 CGATTAATCGTTCC 16357 | | || | |||| Sbjct 1875 CCACTATCCTTTCC 1862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510280332175320