Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq6383 206 3e-48
seq32390 111 2e-19
>seq6383
Length=23588
Score = 206 bits (228), Expect = 3e-48
Identities = 405/599 (68%), Gaps = 0/599 (0%)
Strand=Plus/Plus
Query 16184 AGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGT 16243
|||||||| ||||| || || || ||||| || || | || || |||||||| |||||
Sbjct 7522 AGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGCAAGCCCTCATCTCTGCTAATAAGC 7581
Query 16244 TCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA 16303
||| |||| || || | || ||||| ||||| ||||| | ||||||||||| |
Sbjct 7582 TCGCTGGAGAATGTGAGGCCGGGCATCAGCCCTCGCTTCTTGAGCCAGAATATCGATGTG 7641
Query 16304 AATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTAC 16363
|| ||||| || ||||| || || || || ||||| || | | || || | ||
Sbjct 7642 AAAGACCCAGAGAAGAAGATTCCTTCCACCTCAGCAAACGCCACCACGCGCTCTCCATAG 7701
Query 16364 GTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCC 16423
|| || ||||| | | |||||| | |||| || || || | || | |||| |
Sbjct 7702 GTGGCCTCTTTGTCCCCAATCCAACGCAAGGCCCAGTCTGCCTTCTTCTTGACACAAGGC 7761
Query 16424 ATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCA 16483
||| | || ||||| || || | ||| | || | || | || || || ||
Sbjct 7762 ATCTTCTCGATGGCATTGAAGAGGAACTCCCTCTCTTTGGGGTCTTTGATGTAAGTGTCG 7821
Query 16484 ATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAG 16543
|| || | |||||||| || || |||||||| || ||||| ||||| || |||||||||
Sbjct 7822 ATGAGGAGGCTGTACATCTCAGAATGTATGTTTTCCATGGCGATCTGGAAGCCATAGAAG 7881
Query 16544 CATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACG 16603
|| || || || | || || |||||| | || || ||| ||| ||| |||||||||
Sbjct 7882 CAGCGGGCTTCTGTGATCTGAACTTCCTGGCTGAACCGCTCCACCAAGTTTTCATTCACG 7941
Query 16604 ATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGAT 16663
|| || || || || ||||| ||||||| | |||| |||||| || | |||||
Sbjct 7942 ATGCCATCGCTGGCTGCAAAGAACGCCAGGACGTGCGAAATGAAGTACCTCTCGTCGTCC 8001
Query 16664 GTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAG 16723
| || | | ||| | | || ||||| | ||||| || || | ||||| |||
Sbjct 8002 TTCAGGGTCTCCCAGTGCAGCAGGTCCTTGGAAAGGTCCACCTCCTCCGCTGTCCAGAAG 8061
Query 16724 CTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGAC 16782
|||| | ||||| || ||||| | ||| || || | ||| | ||||| || | |||
Sbjct 8062 GAAGCCTCGGCCTTCTTGTACATCTGCCAGATGTCGTGGTACTCGATGGGGAAGATGAC 8120
>seq32390
Length=18494
Score = 111 bits (122), Expect = 2e-19
Identities = 105/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283
|||| ||||||||||| ||||| |||||||| || | || ||||| |||| |||||
Sbjct 1995 CTTCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCT 1936
Query 16284 TTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAG 16343
||||||||||||| |||||||| || ||||| ||||| || || || |||| ||||| |
Sbjct 1935 TTAACCAGAATATTGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 1876
Query 16344 CGATTAATCGTTCC 16357
| | || | ||||
Sbjct 1875 CCACTATCCTTTCC 1862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 510280332175320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |