Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_001317.1 Length=30624 Score E Sequences producing significant alignments: (Bits) Value seq174924 102 2e-17 >seq174924 Length=7573 Score = 102 bits (112), Expect = 2e-17 Identities = 213/315 (68%), Gaps = 2/315 (1%) Strand=Plus/Minus Query 431 AAGTCATCCTTTGTGGCGACCTCGCTCAGTGGCACGATTTTAATGCCGTCCGGTTTTCCA 490 || |||||||||| ||| || ||||| | || | | | | |||||| || ||| Sbjct 3107 AACTCATCCTTTGCGGCAACTTCGCTGATAGGAATCAGCTGCAACCCGTCCTTGTTGCCA 3048 Query 491 TTGGGAGCGTAGAAAAACAGGTTTTTAAAATTGCCGAGCCCTTTCGAGTTGCGCATCGCC 550 ||||| | || | | |||||| |||||||| |||| ||||| |||| |||| Sbjct 3047 TTGGGCGAGTGCACGAGCAGGTTGCGGAAATTGCCTGGCCCACGCGAGTCTCGCAGCGCC 2988 Query 551 TCGCGCAGCGATTCGACGTCGGTCGCGCTCTG-CGCCGGGTCGGTCACATACATGATGTA 609 || |||| | || ||||| | || ||| | | ||||||||||| || |||| | Sbjct 2987 TCACGCAAGGCGTCCACGTCCAT-GCCCTCCGGCTGCGGGTCGGTCATGTAATGGATGAA 2929 Query 610 ACCCGCATGCGCGCCGTTCTGGTAATACTTGCGGCGGAACAGCGTTGCGGATTCATTCAG 669 || ||||||| |||| | ||| ||| ||| ||||||| |||||| ||||| || || Sbjct 2928 CCCGGCATGCGAGCCGCTTGAGTAGTACCGGCGACGGAACAACGTTGCCGATTCGTTGAG 2869 Query 670 CCAGGCGGAATTAAGCGCGCTGAGATATTCGGGCAGGCCGTAAATCTCCTGATTAATGTC 729 | || || | | | || | |||| |||| || || || ||||||| |||| Sbjct 2868 CAGCGCCGACTGCACCACGGCCAACCATTCCGGCATCCCATAGATTTCCTGATCGGTGTC 2809 Query 730 GGGCTCCAGCAGGTG 744 || ||| |||| || Sbjct 2808 GGCCTCACGCAGCTG 2794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97669012494532