Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq18562 194 1e-44
>seq18562
Length=18598
Score = 194 bits (214), Expect = 1e-44
Identities = 492/744 (66%), Gaps = 11/744 (1%)
Strand=Plus/Plus
Query 18604 TGCGAAATGAATTTCCTCTTTTAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAG 18663
|| || ||||||||||||| | || || || |||| || |||| || | |||| |
Sbjct 12241 TGAGAGATGAATTTCCTCTGCTGACAACCAAATGTGTGTTCTGGAAGGGGATTTTGGAGG 12300
Query 18664 AGTTGTTATGGTTTATCCGCGGGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATATAC 18723
|| || | ||||||||| ||| || || || | |||||||| | | | | |
Sbjct 12301 AGCTGCTGTGGTTTATCAACGGATCCACAAATGCTAAAGAACTGTCAACCAGGGGAGTGA 12360
Query 18724 ACATATGGGATATATACGGATCGAGCAAATTTCTAAATAGGAATGGCTTCCATAAAAGAC 18783
| || |||||| | || || | | || || || | ||| ||| || |||
Sbjct 12361 AAATCTGGGATGCCAATGGGTCTCGTGACTTCCTGGATGGCCTTGGATTCTCTAGCAGAA 12420
Query 18784 ACACGGGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATA 18843
| |||||| | ||||| |||| ||||| |||||||| |||||||| || ||||| |
Sbjct 12421 AAGAGGGGGATTTAGGCCCAGTTTA-GGCTTTCAGTGGAGGCATTTTGGGGCAGAATACA 12479
Query 18844 AAGACTGTCAATCAAACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATA 18903
|| | | ||| | |||| | |||||| | | || ||||||| || || || |
Sbjct 12480 AAAATATGGATTCAGATTATTCAGGTCAAGGAGTGGGCCAACTGCAAAAGGTGATTGACA 12539
Query 18904 CAATTAAAAC-AAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGAT 18962
|| ||||| ||||| | | | || |||| ||| | | ||||||||||||| |||
Sbjct 12540 TGATCAAAACCAAACCTACTGA-CAGAAGAATCATTCTGTGTGCTTGGAATCCAAAAGAT 12598
Query 18963 ATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGT-------TG- 19014
| || || |||| ||||||||||| || | | || ||||| ||||| ||
Sbjct 12599 CTTCCTTTCATGGCCCTACCTCCATGCCATGCCCTTTGCCAGTTCTACGTGTCTACGTGA 12658
Query 19015 CAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTAC 19074
|| || || | |||||||| |||||||||| || | || |||||||| || | ||
Sbjct 12659 TGAATGGGGAGCTGTCCTGCCAGCTATACCAGAGGTCAGCAGACATGGGCCTGGGCGCAC 12718
Query 19075 CGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTA 19134
| |||||||| | | || | || || ||| |||| | || || | | || || |
Sbjct 12719 CCTTCAACATCTCCAGCTACTCCCTGCTCACCCACATGATCGCACACATCATGGGCCTAA 12778
Query 19135 AAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATCATATAGATG 19194
| | || || || | || || |||| |||||||| ||||| ||||||||| ||
Sbjct 12779 AGCCAGGTGACTTTGTACACACTTTGGGAGATGCACACGTTTACCTGAATCATACTGAGC 12838
Query 19195 CTTTAAAAGTGCAGCTAGCTCGATCCCCAAAACCTTTTCCTTGCCTTAAAATTATTCGAA 19254
| | ||| ||||||| || |||| |||||| | || ||||| ||||||
Sbjct 12839 CGCTGAAACTGCAGCTTCAGTGAGAACCAAGACCTTTCCTGAAGCTCAAAATCCTTCGAA 12898
Query 19255 ATGTAACAGATATAAACGACTTTAAATGGGACGATTTTCAGCTTGATGGATATAATCCAC 19314
| || | || | ||||| | || || |||||| |||| ||||| ||||| |
Sbjct 12899 AAGTTGAGGCAATTGATGACTTCAGGGCTGAAGACTTTCAGATTGAAGGATACAATCCCC 12958
Query 19315 AccccccccTAAAAATGGAAATGG 19338
|||| | | |||||||||||||
Sbjct 12959 ACCCGACTATTAAAATGGAAATGG 12982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398640242514045
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |