Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq18562 194 1e-44 >seq18562 Length=18598 Score = 194 bits (214), Expect = 1e-44 Identities = 492/744 (66%), Gaps = 11/744 (1%) Strand=Plus/Plus Query 18604 TGCGAAATGAATTTCCTCTTTTAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAG 18663 || || ||||||||||||| | || || || |||| || |||| || | |||| | Sbjct 12241 TGAGAGATGAATTTCCTCTGCTGACAACCAAATGTGTGTTCTGGAAGGGGATTTTGGAGG 12300 Query 18664 AGTTGTTATGGTTTATCCGCGGGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATATAC 18723 || || | ||||||||| ||| || || || | |||||||| | | | | | Sbjct 12301 AGCTGCTGTGGTTTATCAACGGATCCACAAATGCTAAAGAACTGTCAACCAGGGGAGTGA 12360 Query 18724 ACATATGGGATATATACGGATCGAGCAAATTTCTAAATAGGAATGGCTTCCATAAAAGAC 18783 | || |||||| | || || | | || || || | ||| ||| || ||| Sbjct 12361 AAATCTGGGATGCCAATGGGTCTCGTGACTTCCTGGATGGCCTTGGATTCTCTAGCAGAA 12420 Query 18784 ACACGGGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATA 18843 | |||||| | ||||| |||| ||||| |||||||| |||||||| || ||||| | Sbjct 12421 AAGAGGGGGATTTAGGCCCAGTTTA-GGCTTTCAGTGGAGGCATTTTGGGGCAGAATACA 12479 Query 18844 AAGACTGTCAATCAAACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATA 18903 || | | ||| | |||| | |||||| | | || ||||||| || || || | Sbjct 12480 AAAATATGGATTCAGATTATTCAGGTCAAGGAGTGGGCCAACTGCAAAAGGTGATTGACA 12539 Query 18904 CAATTAAAAC-AAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGAT 18962 || ||||| ||||| | | | || |||| ||| | | ||||||||||||| ||| Sbjct 12540 TGATCAAAACCAAACCTACTGA-CAGAAGAATCATTCTGTGTGCTTGGAATCCAAAAGAT 12598 Query 18963 ATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGT-------TG- 19014 | || || |||| ||||||||||| || | | || ||||| ||||| || Sbjct 12599 CTTCCTTTCATGGCCCTACCTCCATGCCATGCCCTTTGCCAGTTCTACGTGTCTACGTGA 12658 Query 19015 CAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTAC 19074 || || || | |||||||| |||||||||| || | || |||||||| || | || Sbjct 12659 TGAATGGGGAGCTGTCCTGCCAGCTATACCAGAGGTCAGCAGACATGGGCCTGGGCGCAC 12718 Query 19075 CGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTA 19134 | |||||||| | | || | || || ||| |||| | || || | | || || | Sbjct 12719 CCTTCAACATCTCCAGCTACTCCCTGCTCACCCACATGATCGCACACATCATGGGCCTAA 12778 Query 19135 AAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATCATATAGATG 19194 | | || || || | || || |||| |||||||| ||||| ||||||||| || Sbjct 12779 AGCCAGGTGACTTTGTACACACTTTGGGAGATGCACACGTTTACCTGAATCATACTGAGC 12838 Query 19195 CTTTAAAAGTGCAGCTAGCTCGATCCCCAAAACCTTTTCCTTGCCTTAAAATTATTCGAA 19254 | | ||| ||||||| || |||| |||||| | || ||||| |||||| Sbjct 12839 CGCTGAAACTGCAGCTTCAGTGAGAACCAAGACCTTTCCTGAAGCTCAAAATCCTTCGAA 12898 Query 19255 ATGTAACAGATATAAACGACTTTAAATGGGACGATTTTCAGCTTGATGGATATAATCCAC 19314 | || | || | ||||| | || || |||||| |||| ||||| ||||| | Sbjct 12899 AAGTTGAGGCAATTGATGACTTCAGGGCTGAAGACTTTCAGATTGAAGGATACAATCCCC 12958 Query 19315 AccccccccTAAAAATGGAAATGG 19338 |||| | | ||||||||||||| Sbjct 12959 ACCCGACTATTAAAATGGAAATGG 12982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398640242514045