Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq18562 190 1e-43
seq66558 159 2e-34
seq95250 125 5e-24
seq145711 82.4 6e-11
>seq18562
Length=18598
Score = 190 bits (210), Expect = 1e-43
Identities = 491/739 (66%), Gaps = 13/739 (2%)
Strand=Plus/Minus
Query 101541 CCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATAT-AATGTCATCTGCT 101599
|||| | ||||||||| | ||||| || || || ||| ||| | || ||| || ||
Sbjct 12982 CCATTTCCATTTTAATAGTCGGGTGGGGATTGTATCCTTC-AATCTGAAAGTCTTCAGCC 12924
Query 101600 TTAAAGTCATCAAT-GCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGGTCTAGG 101658
| ||||||||||| || | || | |||| | | | | || | | || ||||| ||
Sbjct 12923 CTGAAGTCATCAATTGCCTCAA-CTTTTCGAAGGATTTTGAGCTTCAGGAAAGGTCTTGG 12865
Query 101659 AGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCC 101718
|| | | ||||| ||| || | ||| | |||| | || | ||| ||||||||
Sbjct 12864 TTCTCACTGAAGCTGCAGTTTCAGCGGCTCAGTATGATTCAGGTAAACGTGTGCATCTCC 12805
Query 101719 TATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAA 101778
| ||| || | ||| || || ||| ||| ||| || || |||||| || |
Sbjct 12804 CAAAGTGTGTACAAAGTCACCTGGCTTTAGGCCCATGATGTGTGCGATCATGTGGGTGAG 12745
Query 101779 AAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATA 101838
|| || ||||| | ||||| || || | || | ||||| || ||||| || || ||
Sbjct 12744 CAGGGAGTAGCTGGAGATGTTGAAGGGTGCGCCCAGGCCCATGTCTGCTGACCTCTGGTA 12685
Query 101839 CAGTTGACAGGAAAGCTTTCCAT----CAC--AGACA--TAAAATTGACTTAATACATGA 101890
|| || ||||| |||| |||| ||| ||||| || || || | | ||||
Sbjct 12684 TAGCTGGCAGGACAGCTCCCCATTCATCACGTAGACACGTAGAACTGGCAAAGGGCATGG 12625
Query 101891 CAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTT 101950
|| || || | |||| ||||| ||| |||||||||||||| | || |||
Sbjct 12624 CATGGAGGTAGGGCCATGAAAGGAAGATCTTTTGGATTCCAAGCACACAGAATGATTCTT 12565
Query 101951 CTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCT 102010
|| || ||||| || ||||| || | ||||||| || || | |||| | |||||||
Sbjct 12564 CTGTCAGTAGGTTTGGTTTTGATCATGTCAATCACCTTTTGCAGTTGGCCCACTCCTTGA 12505
Query 102011 CCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCA 102070
||| |||||| | | | ||| |||||||| || ||||||||||||||||| ||
Sbjct 12504 CCTGAATAATCTGAATCCATATTTTTGTATTCTGCCCCAAAATGCCTCCACTGAAAGCC- 12446
Query 102071 TACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGAT 102130
|| || || || | ||| || || | |||| | | || ||||| ||| | ||
Sbjct 12445 TAAACTGGGCCTAAATCCCCCTCTTTTCTGCTAGAGAATCCAAGGCCATCCAGGAAGTCA 12386
Query 102131 CTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTA 102190
| ||| ||||| |||||||| || | ||| || | ||| || ||||| | ||
Sbjct 12385 CGAGACCCATTGGCATCCCAGATTTTCACTCCCCTGGTTGACAGTTCTTTAGCATTTGTG 12326
Query 102191 GATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTA 102250
||||| |||||||||||| ||| || || | || || |||| || || | || ||
Sbjct 12325 GATCCGTTGATAAACCACAGCAGCTCCTCCAAAATCCCCTTCCAGAACACACATTTGGTT 12266
Query 102251 GTTAAAAGTGGAAATTCAT 102269
|| | || ||||||||||
Sbjct 12265 GTCAGCAGAGGAAATTCAT 12247
>seq66558
Length=42017
Score = 159 bits (176), Expect = 2e-34
Identities = 165/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 26957 GGGAGTAACGCATGTGCAGCCTACAGTCACTAGCATCTTCTCTAGCCTAAATGAATTAGG 27016
||| || ||||| |||||||| ||| |||| ||||||||||| ||||| || || | ||
Sbjct 41220 GGGGGTTACGCAGGTGCAGCCCACATTCACCAGCATCTTCTCCAGCCTGAAGGAGTGGGG 41161
Query 27017 GCAGGGTTGATGCCCTTTGCGCACCACTAGAATCTCTTGTTGGATAGGGACTGAGTTCAT 27076
|||| | ||| | | |||||| || || |||||||| ||||| ||||| |||||||
Sbjct 41160 GCAGTGCTGAGGATCCCTGCGCAAGACCAGGATCTCTTGCTGGATGGGGACGGAGTTCAG 41101
Query 27077 GTGGTAGTCTACATTCCCATCAGCATTAACACATCCTAAGTAGCGACACTTTGCTTCCCA 27136
||||| || | ||||| |||| | ||||| |||| ||| |||||||| |||||
Sbjct 41100 GTGGTGGTTGATCTTCCCTTCAGGGCTGACACAGAACAAGTTGCGGCACTTTGCCTCCCA 41041
Query 27137 AATCACAGAGGGATATCTATCTTGATCTTCATTGCG 27172
||||||||||| ||||| || | || ||||||||
Sbjct 41040 GATCACAGAGGGGTATCTCTCACGGTCCTCATTGCG 41005
>seq95250
Length=14987
Score = 125 bits (138), Expect = 5e-24
Identities = 93/109 (85%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349
||| ||||| | |||||||| | |||||| ||| | |||||||| || |||||||||||
Sbjct 14026 CTTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTTTAAAGGTCGATTCTTCTCAGG 14085
Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCT 4398
||| |||||||| ||||| |||||||||||||| |||||||||||| ||
Sbjct 14086 AATGGAGAACCAGGTCTTCTTACCCATAATCACCAAATTCTGTTTACCT 14134
Score = 114 bits (126), Expect = 9e-21
Identities = 107/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 4163 CTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTG 4222
||||||| |||||||| ||||| | |||||| |||||||| |||||||||| ||||||||
Sbjct 6930 CTTTATAAACAGAACTGCCTCCCACTATCCAAACCATGTCCACTTTATTTGTTAATTCTG 6989
Query 4223 GCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTG 4282
| | || | |||||||| |||||||| | ||| | || | ||||||||||| | ||
Sbjct 6990 GATCCTCAATCAGTTTTAAGGCATCATCCAGACTTCTGGCAAGAAAATGAGCTCCTTTTG 7049
Query 4283 GAAGCTCCTTTAGTTC 4298
|| | ||| | || ||
Sbjct 7050 GAGGTTCCCTGAGGTC 7065
Score = 107 bits (118), Expect = 1e-18
Identities = 97/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 4056 AAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCAT 4115
|||||| || |||| | ||||| |||||||||||| ||||||| |||||| || | |||
Sbjct 4865 AAGTTTATAGCTCTCCAAATCAATTTCTGGAAAAAATGTGTCACTTTCAAATTCCTTCAT 4924
Query 4116 GATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGA 4175
|||||| |||||||||||||| |||| || ||| | |||| ||||| || | ||| |
Sbjct 4925 GATCCTGGTCACAAACAGTTTCAGATGGCCTGGCTTGGTCATGGCTTCCTTTGAAACAAA 4984
Query 4176 AC 4177
||
Sbjct 4985 AC 4986
>seq145711
Length=17273
Score = 82.4 bits (90), Expect = 6e-11
Identities = 107/148 (72%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092
|||| |||||||| || ||||||||||||||||| ||||| || || || | ||| ||||
Sbjct 14600 CTTTGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCTT 14659
Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152
| | |||| | | || ||||| ||| | || | ||| ||||| |||||||| |
Sbjct 14660 CTTTTCTGCTAGAGAATCCAAGGCCATCCAGGAAGTCACGAGACCCATTGGCATCCCAGA 14719
Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTT 102180
| | ||| || | ||| || |||||
Sbjct 14720 TTTTCACTCCCCTGGATGACAGTTCTTT 14747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 360470147924651
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |