Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq161317 91.5 1e-13 seq104553 84.2 2e-11 seq174782 82.4 7e-11 >seq161317 Length=2104 Score = 91.5 bits (100), Expect = 1e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 29076 GATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGAT 29135 |||||||| |||| ||||| || ||||| ||||| |||||| | |||| | |||| Sbjct 1418 GATCAACAGCGACTCATCTTCGCTGGCAAGCAACTTGAAGATGGCCGAACTCTTTCCGAC 1359 Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGT 29170 ||||| |||||||||||||||||||| ||| |||| Sbjct 1358 TACAACATTCAGAAGGAATCTACTCTCCACTTGGT 1324 >seq104553 Length=43841 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||| ||||| | || ||||| |||| ||| |||||||| ||||| ||||||||| Sbjct 35600 GATAAGGAAGGAATTCCTCCTGATCAGCAAAAACTGATCTTTGCTGGCAAGCAACTGGAA 35541 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 ||| ||| || | || ||||| ||||| ||||| ||||||||||| | ||||| Sbjct 35540 GATGGGCGTACTTTGTCTGACTACAACATTCAAAAGGAGTCTACTCTTCATCTTGTGTT 35482 >seq174782 Length=7384 Score = 82.4 bits (90), Expect = 7e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||| ||||| | || ||||| |||||||| |||||||| || || ||||||||| Sbjct 246 GATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTTGCTGGAAAGCAACTGGAA 187 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCA 29164 ||| ||| || | || ||||| ||||| ||||| ||||||||||| Sbjct 186 GATGGACGTACTTTGTCTGACTACAACATTCAAAAGGAGTCTACTCTTCA 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427409905576655